Contarinia nasturtii (swede midge): 116345361
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Entry
116345361 CDS
T08003
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04140
Autophagy - animal
cns04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116345361
04148 Efferocytosis
116345361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116345361
Membrane trafficking [BR:
cns04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116345361
Hops complex
116345361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
Beta-prop_EML_2
zf-C3HC4_2
zf-RING_2
WD40_CDC20-Fz
WD40_WDHD1_1st
zf-rbx1
WD40_Prp19
zf-C3HC4
Beta-prop_RSE1_2nd
zf-C3H2C3
zf-RING_5
Beta-prop_VPS8
zf-RING_Vps41
IFT81_CH
zf-RING-like
zf_RING_Vps8_fungal
zf-RING_UBOX
WD40_MABP1-WDR62_2nd
zf-C3HC4_3
zf_RING_Vps8
NPF
Motif
Other DBs
NCBI-GeneID:
116345361
NCBI-ProteinID:
XP_031630515
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MAIFEWRKFNFFDLKNNADHGKLAEVLKEATIKCTTNGNNQIIICDSYGCIHIFDRNWEA
STFKGHVGPIELCELSRQHNLLITVGKDDNGTLPVFKIWNLSKASNVNGGISMPCVRTEK
IILQKPTAIAVSENGHYFAIGFDRGTIALYRGDISRDRSKNLKSISAGSTPITGIAFKQH
TKTVQMFVCSESGVLVYNLQHKDREVKTVLDKNIAPTRCCALQTAHGTNESHFMVGKDDA
VYCYTIDGRGPCYALEGEKSIIQWFRSHLLTISKPTKNTMSLQKESVLTVIDILNKFIVF
STPIESTVAILIEFGTCFIITGNKMVYHLDEKDLQSKLSLLFKKNLYDIAVRIAKSNQHD
PEGLADIFKQYGDHLYGKGDFSGAVEQYIKTIGYLEPSYIIRRFLDSRHINYLTDYLQAL
HKQGKATADHTTLLLNCFTRLDKTDQLKEFLSNDQNPDLIFDLDVAIKVCRNASVEHALV
LAKRNLKYDSCISILTEDMCAYGDALDYIAELPFEHAQKNLKKYGNILMKNCPQRTTELL
KKLCTDYYQSQNNDNGDVRDSGPNDIGSNNLMTNSTLFFDTSPHIDRANPEDFIHLFTKA
EPELLIDFLEHLLTNMSNCSQLVYNTLIEHYLRCWKIDSRAEKRLLEILRRTSSNDEPSL
PYDRNHVLILCSTYEFWPGIMYIYEEQELYHLIVRYYLKIGDYNSLINTCKRLGKMQPSL
WLQALTGLRDNKNAPTNLLSQVLQVIAQEKLQSPLQVLMCLAVENGPNLSAVRDYFLQVF
QKDNESARNEEELVEKYRKDSVKLREHIQQLNERPIEFRGTLCDTCNQPLTMPSRYFLCQ
HAYHQDCLRGYSENDKDCPVCRAKNLQLIDALQAQSESRAQHETFHNLLNRSTEPFSVVA
EYFGHGMFNKILIVEEPDEVSQDVIKAAQKQHTQHTEANPYDKYGSGAESKLRLEETNTM
SNKMSNTAYYAAPVPEGRMRAQEQSRFVSHDIKSQDLERRPIKPVQEYRRPVPNATIAVP
KNSNTPKNPFDEDDDNNDKYDESKNPFADDEDDSPKTEVAKDVSSSVQSNPFGDYDDNLN
PFE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggccatttttgaatggagaaagttcaatttctttgatttaaaaaacaatgccgaccat
ggcaaactggccgaagtgctaaaggaggcaaccataaaatgtacaacaaatggaaataac
caaattattatttgtgattcgtatggttgtattcacatatttgatcgaaattgggaggcg
tcaacattcaaaggtcatgtcggacccattgagttatgtgaactatcgcgtcaacacaat
cttttaattacagtcggaaaagatgacaatggaacattgcccgtttttaaaatatggaat
ttatcaaaggcatcgaatgtaaatggtggcatttcaatgccatgcgttcgcaccgaaaaa
attatactacaaaaaccgaccgcaattgctgtatccgaaaatggtcattactttgcaatt
ggttttgatcgtggcacaattgcattatatcgcggtgacattagtcgagatcgttcgaaa
aatctaaaatccatttcagccggttcaacaccaattactggcattgcatttaaacagcat
acaaaaacggtacaaatgtttgtgtgctcggaatcgggcgttttggtttataatttacaa
cataaggatcgtgaagtgaaaacggtgcttgataaaaatattgcgccaacacgatgctgt
gccttacaaacagcccatggaacgaacgaaagtcattttatggtgggaaaagatgatgca
gtttattgctatacaatcgatggtcgaggtccatgttatgcactcgaaggtgaaaagtcc
attatacaatggttccgatcacatctgttaaccatttcaaaacccaccaaaaataccatg
tcgttacaaaaagaatcggtgttgacggtcattgatattctaaataaatttatcgtcttt
tcgacaccgatcgaatcaacggttgccatactcattgaattcggtacatgtttcataata
acgggcaataaaatggtttatcatctcgacgaaaaagatttacaaagtaaattaagctta
ttattcaaaaagaatttatacgatattgccgttcgcatagcgaaaagtaatcaacatgat
ccagaaggattggctgatattttcaaacaatatggtgatcatttgtatggcaaaggtgat
ttttctggcgctgttgaacaatacattaaaacaattggttatttggagccatcgtatatc
attagacgatttttagattcgagacacatcaattatttgaccgattatttgcaagcatta
cacaaacagggaaaagcaacagctgatcatacgactctgctattgaattgctttacgcgt
ttggataaaacggatcaactcaaagagttcctgagcaatgatcaaaatccggatttaatc
tttgatttagatgtagctattaaagtgtgtcgaaatgcatccgttgaacatgctttggtt
ttggccaaacgaaatctaaaatacgattcatgtattagtatcctaacggaagatatgtgc
gcgtatggtgatgcactcgattatattgccgaactgccatttgaacatgctcagaaaaat
ttgaaaaaatacggtaacattttgatgaaaaactgtcctcaacgaacaacggaattgctg
aaaaaactctgcaccgattactatcaatcgcaaaacaatgataatggcgatgttcgtgat
tcgggcccaaatgacatcggtagcaataatttaatgaccaattctacgttatttttcgac
acatcaccccacattgatcgtgcgaatccagaggattttattcatctttttacaaaggct
gaaccagagttactgatcgattttcttgaacatttacttaccaacatgagcaattgttca
caattagtgtacaatacattgattgaacattatctacgatgctggaaaatcgattcaaga
gccgaaaaacggttgttggaaattctgcgacgaacatcgtccaacgatgaaccaagtctg
ccatacgatcgaaatcatgtgctcatcttatgtagtacgtacgaattttggccaggaatt
atgtacatttatgaagagcaagaattataccatttgattgtacgatattatttgaaaatt
ggcgattacaatagtttgatcaacacttgcaaacgattaggtaaaatgcagccatcgttg
tggttacaggcattgaccggtctacgtgataataaaaatgcgccaaccaatttgctttcg
caagtattacaagtgatcgctcaagaaaagctgcagtcaccgttacaagtgttaatgtgt
ttggccgttgaaaacgggccaaatctatcagccgttcgtgattattttctacaagtattc
caaaaggataacgagtctgctagaaatgaagaagaattagttgagaaatatcgcaaagat
tcggtgaaattgagagagcacatacaacaattgaatgaacgtccaatcgaatttcgtggc
actctctgcgacacatgtaatcaaccactgacaatgccttcacgttatttcctctgccaa
catgcctaccaccaagattgccttcggggctattcagagaatgataaagattgtccggtg
tgccgtgcaaagaatttgcagttgatcgacgcattacaagctcaaagcgagtcacgtgca
cagcatgaaaccttccacaatctcttgaatcgatctaccgaaccattttcggtggttgct
gagtacttcggtcacggaatgtttaacaaaattttgattgtcgaagagccggatgaagtt
agtcaagatgtaatcaaggcagctcagaagcaacacactcagcataccgaagcaaatcca
tacgataaatatggttcgggtgctgaatcaaaacttcgtctagaagagaccaacacaatg
agtaataaaatgtcaaatacggcttattatgcggcaccggtgccagagggacgtatgaga
gcacaggaacaatctagatttgtctcgcacgatataaagtcacaagatctagaacgacgt
cctataaaaccagttcaagaatatagaagaccagtgccaaatgcaacgattgccgttccg
aaaaattccaacacgccgaagaatccattcgacgaagatgacgataacaatgataaatat
gatgaatcaaagaatccattcgccgatgatgaagatgactcaccgaaaacagaggttgcc
aaagatgtaagcagtagtgttcaaagtaatccgttcggcgattatgatgataatttgaat
ccatttgaatag
DBGET
integrated database retrieval system
