Contarinia nasturtii (swede midge): 116345455
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Entry
116345455 CDS
T08003
Name
(RefSeq) syntaxin-1A isoform X1
KO
K04560
syntaxin 1A
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116345455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116345455
Membrane trafficking [BR:
cns04131
]
SNARE
Syntaxin (Qa)
Stx-PM
116345455
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Spectrin_Anc-1
Spectrin_Anc-1_2
YtxH
Lzipper-MIP1
ETRAMP
WXG100
TraF_2
Herpes_US9
MRC1
Isochorismatase
FUSC
Baculo_PEP_C
DUF6584
Laminin_II
Motif
Other DBs
NCBI-GeneID:
116345455
NCBI-ProteinID:
XP_031630713
LinkDB
All DBs
Position
Unknown
AA seq
295 aa
AA seq
DB search
MTKDRLAALVAAQSDEEDVGTDDVAVNVEGRDGFMDDFFNEVEEIREMIDKIQANVEEVK
KKHSAILSAPQSDEKTKQELEDLMADIKKTANKVRTKLKGIEQNIEQEEQANKSSADLRI
RKTQHSTLSRKFVEVMTEYNRTQTDYRERCKGRIQRQLEITGRTTTNEELEEMLEQGNSA
VFTQGIIMDTHQAKQTLADIEARHADIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEY
HVEHAVDYVQTATQDTKKALKYQSKARRKKICILVCVIILVIIVAGALGHYTGIY
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggacagacttgcggcgctcgttgcggcacaaagcgatgaggaggatgttggg
acggacgatgttgccgtcaatgttgaaggacgtgatggcttcatggacgacttcttcaac
gaagtggaagagataagggaaatgatagacaaaatacaagcaaatgtcgaagaagtaaag
aaaaaacacagtgccatcctttcggcacctcaatcagatgagaaaacaaagcaagagctt
gaggatctgatggccgatatcaagaaaactgccaacaaagttcgtacaaaacttaagggt
attgaacaaaacatcgaacaagaagaacaagcgaataaatcaagtgctgatctacgaata
cgaaagacacaacactcgaccttatcaagaaaattcgttgaggtgatgacagaatataat
agaactcaaaccgattacagagaacggtgcaaaggcagaatacaacgtcaattggaaatc
actggtagaacgacgacaaatgaagaattagaagaaatgttggagcaaggaaattcagcc
gttttcacacaaggcattatcatggatacacatcaagccaaacaaacacttgccgatatt
gaagcccggcatgccgatatcatcaaattggaaaattcgataagagaattgcacgatatg
ttcatggatatggctatgttggtcgaaagtcagggtgaaatgattgatcgcatagaatac
catgttgaacatgcggtcgattatgtgcaaacagcaacgcaagataccaaaaaagcgctc
aaatatcagagcaaagctcgtcggaaaaagatttgtattttggtctgtgtcatcattctc
gtgatcatcgtggcaggcgcattaggacattacaccggcatttactaa
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