Contarinia nasturtii (swede midge): 116345720
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Entry
116345720 CDS
T08003
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116345720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116345720
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116345720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_RIG_2nd
Cytochrom_D1
DUF3141
Motif
Other DBs
NCBI-GeneID:
116345720
NCBI-ProteinID:
XP_031631213
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MSDSESGSEHDYSNFFDDQEAVDDEKPSVAVKQEPNDTEGKNHNDEENETKPEIDSKSMK
LSAKEQRKLGKLKEQQLKEDIFGNKNNYLKNLEILADGVKKKKKSDKKRKPVWNDDDDEG
TDVVTRIDNYKCEVTQKEVYKKQLENKFQRILGTPAWADLNRKNKGGDDDDSDDEILRTV
GHIAQTKSAHLISGQLQFKKLKDLNRESYAEGPSITSVTFHPGSSVGLVSGTKGIATIYS
IDGKKNDKLHSMAFKNFPIRCCRLSKDGSQAIFGGSQKYFYTYDLLSGQTQRIFLPKTIT
KMHNFEVSPCGKYVGVIGRFGEIHLLFANTFELLCTLKQEHDATALTFSMNSKYLFTHGV
DNEVNIFDIGEQRFTHRFIDDGCINGSTISISPNGQMVAASSQQGVVNVYNYNDVLHQKY
PHPQKTILNLTTAISSTTFNHTSELLAIASKDVEDAVRIVHFPSGTVFHNFPATNSNIGK
PNVIQFSPQSGYFAIGNGDKQVPMYRLKHFNNF
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattcggaaagtggtagtgaacatgattattcaaatttttttgatgatcaagaa
gcggtagacgatgaaaaaccatcggttgctgtgaaacaagagccaaacgataccgaaggc
aaaaatcataatgatgaagaaaatgaaacgaagccagagatcgatagtaaatcgatgaaa
ttatcggctaaggaacaacgtaaactgggcaaattgaaagagcaacaattgaaagaagac
atttttggtaataaaaacaattacctaaaaaatcttgaaatattggccgatggtgtaaag
aagaagaagaaatcagataaaaagagaaagccagtttggaatgatgatgacgacgaaggc
accgatgtagttaccagaattgacaattacaaatgtgaggtcacacaaaaagaggtgtat
aaaaagcaattggaaaataaattccaacgtatacttggcacacctgcttgggccgatttg
aatcgcaaaaataagggcggcgatgacgatgattctgatgatgaaattctacgtacggtc
ggtcatatagcgcaaacaaaaagtgcacatttgataagtggccaattgcagtttaaaaaa
ttaaaagatttaaatcgtgaaagttatgcagagggtccatcaataaccagtgtcacattt
catccgggctcatcggttggattggtgtccggtacaaaaggaattgcaacaatttattca
attgatggcaagaaaaatgataaacttcacagtatggcatttaaaaattttccaattcgc
tgttgtcgtctttcaaaggatggcagccaagccatttttggcggttcacaaaaatacttc
tacacatatgatttgctgagtggccaaacgcaacgcatctttttaccaaaaacaataaca
aaaatgcacaattttgaggtttcaccgtgcggtaaatatgttggtgttattggacgtttt
ggtgaaatacatttgttatttgcaaacacatttgaattgctgtgcacattaaaacaggaa
catgatgcaaccgcattaacattttcaatgaattcaaaatacttatttacgcatggtgtg
gataatgaagtgaatatttttgatattggtgaacaacgattcacgcatcgttttatcgat
gatggctgcatcaatggatcaaccatatcgattagtccaaatggacaaatggtggccgca
tcaagtcaacagggcgttgttaatgtatacaactataatgatgtgctgcatcaaaaatat
ccacaccctcaaaagaccattctaaatttaacgacagccatttcaagtacaacatttaat
catacatcggaattgcttgcaatcgcatcaaaagacgtcgaagatgctgttcgaatagta
cattttccaagtggaacggtctttcataattttccagcgacaaattcaaacatcggcaaa
cccaatgtcatacaattttcaccacaaagcggatattttgccattggaaatggcgacaaa
caggttcccatgtatcgactgaaacatttcaataacttttga
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