Contarinia nasturtii (swede midge): 116345833
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Entry
116345833 CDS
T08003
Name
(RefSeq) glycine receptor subunit alpha-4-like isoform X1
KO
K05195
glycine receptor alpha-3
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04080
Neuroactive ligand-receptor interaction
cns04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116345833
04082 Neuroactive ligand signaling
116345833
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cns04040
]
116345833
Ion channels [BR:
cns04040
]
Ligand-gated channels
Glycine
116345833
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF4939
Aldedh
Motif
Other DBs
NCBI-GeneID:
116345833
NCBI-ProteinID:
XP_031631399
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MRSLDIICAIILFKIKVITMTPQSTIQTPYTFQEGYDKNSRPSTSTTDVTIGLYLNRISA
VDENNEEISFDVFLQVIWEDKRIHHRNNTTDQKYIELKIEERHKIWVPDLYIRQLREMKV
LTLFEEISSLRLYKNSTLVLSLGASIAITCDMDFVLYPLDVQSCPVDFSSYKYSIKDMSF
RWKKDNPITFPKDFDEGFFRLPKYVVSFSTEMEPSILHFNDVDHFSARLQITLSREVKSY
LLENYLPSTLFVLISWGSFVVVPEIVPGRMVLLVTTLLSLVTMFDTVRNNSPNALELKCI
EVWLISCTLFVFLALMEYFIVLFGIRYDKHWRKPKPKTPASVPSHNQTTAPSTATTNLSS
ENDRKPALEHAARAFSTMNKITPETRAKFSTMAAKRREEALINEANCIPPPSSLNQSSLF
GNRRRFRSVAENLVLYVGSQHGRLDQISLILFPMTFLLFTITYWIIYLNESKRQTI
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcgctggatatcatttgtgcgataatactgttcaaaataaaagtgataacaatg
acaccgcaatcaacaatccaaacgccatacacattccaggagggctatgacaaaaattca
agaccgagtacctcgacaacagatgtaactataggcttatatttgaaccgtatatcagct
gtagatgagaataatgaagagatttcatttgatgtatttctacaagtgatttgggaagac
aaacgaatacaccaccgtaacaatactaccgatcaaaaatatatcgaattgaaaattgaa
gagcgtcacaaaatatgggtgcccgatctttacatacgacaattacgcgaaatgaaagtt
ctcacactgtttgaggaaatttccagtttacgtttgtacaaaaacagcacattagtattg
agcttaggagcctctatagcgatcacatgtgatatggattttgtattgtacccccttgat
gtgcagagctgtcccgttgattttagcagttataaatattcgataaaagatatgagcttt
cgctggaaaaaagacaatccaatcacatttccaaaggattttgacgaaggtttttttcga
ttgccaaaatatgttgtatcattttcgaccgaaatggaaccaagtattttgcattttaat
gatgtggatcacttttctgcacgtttacaaatcacattatcgcgtgaagttaaaagttat
ttattggaaaactatctgccatcaacattatttgtcctaataagttggggcagttttgtc
gtagttcccgaaattgttccaggccgtatggtccttttagtcacaacgcttctctcatta
gtcacaatgttcgatacggtgagaaataattcaccaaatgcattggaattaaagtgtatt
gaggtgtggctaatatcatgcacattgtttgtgtttttggcattgatggaatatttcatt
gtgttatttggtattcggtacgacaaacattggcgtaaaccaaaaccaaaaacaccggca
tccgttccgtcacataatcaaacaactgcaccatcaacagcaacaacaaatctatcatcg
gaaaacgatcgaaaacctgcattggaacatgcagctcgtgcattttcaaccatgaataaa
ataacgccagaaacacgagccaaattttcaacgatggctgctaaaagacgcgaagaggca
ctaataaatgaagcaaattgcatacctccgccatcgtcactgaatcaatcgtcgttgttt
ggcaatcgccgaaggtttcggagcgtggcagaaaatttggttttatatgtaggctctcag
cacgggcgcctcgatcaaatctcattgattctttttccaatgacatttcttctgttcaca
ataacctattggatcatctatttaaatgaatcaaaacgacaaaccatttga
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