Contarinia nasturtii (swede midge): 116346170
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Entry
116346170 CDS
T08003
Name
(RefSeq) uncharacterized protein LOC116346170
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns00040
Pentose and glucuronate interconversions
cns01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116346170
Enzymes [BR:
cns01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116346170
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Motif
Pfam:
Pectate_lyase_4
TRAPP14_C
Motif
Other DBs
NCBI-GeneID:
116346170
NCBI-ProteinID:
XP_031631966
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Position
Unknown
AA seq
507 aa
AA seq
DB search
MANHQFFLLLFIGIVIFELTNSLPDKKPGTTTSTLRNRKTTAGSSTSRTTTSTGNRKPFT
TTGNAATRKSTTTAASSTVNRKLKIDAPTPDKKVTSTVKKTGGVRTTTRDAISQYPAPDW
YNDNDDSGSSFCGCCRKKNKNSNVYPYAYPSPFGQTGSFPPPYAPISRNAPPTVTQSGTD
KLAGMVGFAKAANVTGGWGGEVVQVNTIQDLINYVGESVPRVLMIQRDIRASSLTKVQMG
SAKSIVSNNGATLYNIYLRATTASSNIVFQNLAFEHSPNNKGNDDIQLYLNYGTGYWIDH
CSFVGHKWSPDDGSLDKLLYIGEQASLATISNCFFANHRFGLIFGHPGDDTNVVADGDVR
LTMCNNHFESLGNRAPGLFRYGHYHVYNNYIENYGLGFTVATNGDVVSEYNYFGSSTTKN
GMLDDKGSGTFYDIGSVPAITNQLSPSVNWNPASIYSYQPVTDANPEMIKYQKKTTISAG
IPSPMKMTLMAPPIQHMISPPSFPSLH
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcaccaattttttttattattattcatcggaatagtaattttcgaacttaca
aactctctgccagacaaaaaacctggcaccacgacttcaactctaagaaatcgcaaaacc
acagccggcagcagcactagtcgcactactacaagtaccggaaatcgcaaacctttcact
accaccggaaatgcagcaactcgcaaatccacaaccacagctgctagtagcactgtaaat
cgtaaactcaaaattgatgctccaactccagataaaaaagttactagcacagtcaaaaag
actggtggtgtacgcaccacaacgcgtgacgccatttcacagtatccagcgcctgattgg
tataatgacaatgacgattcgggttcatcattttgtggttgttgtagaaaaaagaataaa
aattcgaatgtttatccatatgcatatccgagtccctttggtcaaacgggtagctttcct
ccaccatatgcacctatttcaagaaatgctccaccaaccgttactcagtcaggaactgac
aaactagcaggtatggtaggttttgcaaaagcggctaacgttactggcggctggggaggt
gaagtggtgcaggttaatacgatacaagaccttataaattacgtcggcgaaagcgttcct
cgggtgttgatgatccagcgcgacatcagagcctcatcccttaccaaagttcaaatgggt
tcggccaaatcaattgtcagtaataatggagccacattgtataatatttacttgcgtgcc
acaacagcgtcatcaaatatcgttttccaaaacttggcgtttgagcattcgccaaacaac
aagggcaacgatgatattcagttatatctgaactatggcaccggatattggatcgatcat
tgctccttcgttggacataaatggtcccccgatgatggaagtctcgataaacttctttat
atcggagaacaagccagtctagcgaccataagcaattgtttctttgccaaccacaggttt
ggattaatctttggacatccgggagatgatactaatgtagtggcagatggtgatgttcgt
ctcaccatgtgcaataaccattttgaaagcttgggcaatagagcaccgggcctgtttcgc
tatgggcactaccatgtatacaacaactacattgaaaactatggtctgggcttcacggtg
gcaacgaatggtgacgttgtttctgaatataattattttggaagtagcaccaccaagaat
ggcatgttagatgataaaggcagtggaacattttatgatatcggaagcgtgccagccatt
acgaatcaactatctccaagtgtcaattggaatcccgcgtccatttacagttatcaacct
gtaactgatgcaaatcctgaaatgatcaaatatcaaaagaaaactaccatatcggctgga
attccatcgcccatgaaaatgactctaatggcaccacccatacaacatatgatatcgcct
ccaagttttccaagtttacactga
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