Contarinia nasturtii (swede midge): 116346284
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Entry
116346284 CDS
T08003
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
116346284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cns03400
]
116346284
DNA repair and recombination proteins [BR:
cns03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
116346284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Hemocyanin_N
Motif
Other DBs
NCBI-GeneID:
116346284
NCBI-ProteinID:
XP_031632089
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MAKPRDAICIIFDVGVNTNVYDKLKEKTFYDEAKICIESIVRNKIFTKPTDEISLFLMGT
ETTDNDLNAADPTSFHNISHAFDLKPMSWDILKYVQTSIDPPSAYTADWVDAIIVAMDFF
RKQSGDDVKDTIVKGLMDLDIELIVVSKNIDSAKASFIRTPDADANQIQSERFAEDIVRE
NLGVLCNISEAVETLSYVDKKKRRRTPWKAELTIGSNLEIKIAAYIYVRDEKELDAWKNR
FGESVQQLGALGVSTSSSMIAATSKTEYKHNDTVIEKEAAAEALIKGYMYGGEPIIFEDT
KFENGGKQLKLIGFTEIASIKLVYLVGDTIWLVVPQYGADVSTKKFAALLKAMEKSKLAI
IARYAYRAGVAPKLMALFPDEDKMLMYELNYNDSYVDLQFPTLTSNAYAPSDEQRECMDK
FIDSMDLSGEDQMNVDDIEPLGMFDKLLDPGLQYTYRAMAHRAINPGEPMLKLDDDIKAL
ITAPKKPDVEQLKTVFPLKEAKLTGKDAILQKILKADKQEPESEVKPDLEQKKYSDVHEV
GTIKPADDFNSLLDQGEPFNVLSEQIEKVIVAIVIKSMVAMDDKVLKALMVYRETAKLKG
PFKYNSWIPTFKEELKQREKIQLWQSLINEKLGLISANESEISTVTEDEVKEFYKFDDFN
TIQSHTNNNDVLESGADLFDDM
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaccacgggatgcaatttgcatcatttttgatgttggagtcaacaccaacgtg
tacgataaattaaaagagaaaacgttctacgacgaagcaaaaatatgcatcgaatcgatt
gttcgaaacaagattttcaccaagcccaccgatgaaatatcattgtttttgatgggaacc
gaaacgactgacaatgatttgaatgcagctgatccaacaagcttccataatatcagccat
gccttcgatctgaagccaatgtcatgggacattttgaaatacgttcaaactagcattgat
ccgccgagtgcatacacagccgattgggtcgatgcgatcattgttgcaatggatttcttc
agaaagcaatcgggtgacgatgtgaaagatactattgtcaaaggtttgatggatctcgac
attgaattgattgtcgtctccaaaaatatagattcggcgaaagcaagtttcattcgaaca
cccgatgcagatgcaaatcaaattcaaagcgaacgattcgccgaggacattgtgagagaa
aaccttggtgttttgtgcaacataagtgaagctgttgaaacattaagctatgttgacaag
aaaaaacgccgacgaacgccatggaaagctgaattaaccattggaagtaatctggaaatt
aaaattgccgcgtatatttatgtccgtgatgaaaaagaattggatgcttggaaaaatcgt
ttcggcgaaagtgtgcaacaactcggtgcactcggtgtatctacttcatcaagcatgatt
gctgctacctcgaaaactgaatataaacacaatgatacagttattgaaaaagaggctgct
gctgaagctttgatcaaaggatatatgtatggtggtgagccgattatattcgaagacacc
aagtttgaaaatggtggaaaacaattgaaattaatcggattcaccgagattgcttcaatt
aaactggtttatttggttggcgatacgatttggctggttgtaccacaatacggtgccgac
gtttcaacaaaaaagtttgccgctctattaaaagcaatggagaaatcaaaactggcaatc
attgctcgatatgcatatagagctggcgtagccccaaaactcatggcattattccccgat
gaagataaaatgctcatgtacgagctgaactacaatgacagctacgttgatctacagttt
ccgacacttacgtccaatgcatatgcaccgagtgacgagcaacgtgaatgtatggataaa
ttcattgactcaatggatttgtcgggtgaagatcaaatgaatgtcgacgatattgaacca
ttgggaatgtttgacaaattattggatccaggtttgcagtacacatatcgtgcgatggca
caccgtgctatcaatccaggtgaaccgatgttgaagttggacgatgatattaaggcgttg
ataactgcaccgaaaaagccggatgttgaacaattgaaaacggtgttcccattaaaggag
gccaaattaacaggcaaagatgcaatcttgcaaaaaatcctcaaagcggataaacaggaa
cccgaatcggaagtcaaaccagatcttgagcagaagaaatacagtgatgtccatgaagtt
ggcaccattaaaccggcagatgatttcaatagtttgctggaccaaggtgaaccgttcaat
gtgctttcggaacaaatcgaaaaggtaatcgttgccattgtgattaaatcaatggtcgcc
atggatgataaggtgctcaaagctctaatggtatatcgcgagacggccaaattgaaagga
ccattcaaatacaattcgtggataccaacattcaaagaggaattgaaacaacgcgaaaag
attcaattgtggcaatcacttatcaacgaaaaattgggcttgatctcggcaaatgaaagc
gaaatcagtacagtgacagaagacgaagtaaaggaattctacaaatttgatgatttcaac
accatacaaagccacacaaacaataacgatgtacttgaatcgggcgccgacctatttgat
gacatgtaa
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