Contarinia nasturtii (swede midge): 116346292
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Entry
116346292 CDS
T08003
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116346292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cns03021
]
116346292
Enzymes [BR:
cns01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116346292
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
116346292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
116346292
NCBI-ProteinID:
XP_031632106
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MKEIPVLTNSKKEFTQKKLEQNKILLSLGAPHVDSFNYMLDEGLADCAKNIHPVEFEIPG
GDRVKLFIESISITQPQVPTSYLNARNKKIYPTECRQRAGTYTGTCTVGVGWSLNGVCQP
IVDKPMGEIPIMLRSKACNLNGLTPEQLIKRGEHENEWGGYFIMKGHEKLIRMLLMTRKN
FPIAVQRNTWKDRGQHFGDVGIMVRTVKTDQTATTNVLHYLTNGTAKFMFTYRKTFSFIP
VILLLKSLKNCTDEYIYQRLIAGYEDDQYYEGCIQKMLRSVHDETGMHIHEDCKRYLGEV
FRSKFYHLPAWKSHEEITDYMLNECILIHLDDHDDKFNLIVLMTQKLFQCAQNKYKIENS
DSVMMQEVLLGGHLYQKVIKDRIENWLEQLRFAILKQAEQTNFVLNLANFMQACKIAGSI
ERTVSNFLSTGNLVSKSGLGLMQASGLVIMAENINRMRYMSHFRAVHRGSFFVEMRTTEA
RQLLPDAWGFICPVHTPDGSPCGLLNHLTIDCVVSDTPKQSLVDNVPRVLVNLGMVPLNT
TRITYKKHFVVMLEGRVIGHINKSMAQQVCVELRLLKMDGKQVPKFMEIVLVPDIKNGQF
PGLFLFIGPARMMRPVKNLKANKIEYIGSFEQVYMNICIDAEEAYEGVTTHQEISKTAFM
SNLANLIPMPDCNQSPRNMYQCQMGKQTMGTPTHTWQLQSETKLYRLQSPATPLFRPVHH
DNIEMDDFAMGTNAIIAVISYTGYDMEDAMIINKSADERGFAHGSIYKSQFIELDGTSFF
ARNPHDKKLDKFIDNDGLPYPGRKIKPLEILYCFFDTNESVYKTKKYTGSEDCVVDNIKL
CGTLNTDSKKIVCLTLRVPRNPTVGDKFASRAGQKGILSQKWPTEDLPFTESGLIPDIVF
NPHGFPSRMTIAMMIENMAGKSAALHGFVHDATPFRFDEKNTAIDHFGRLLQAGGYNYYG
TERVYSGIDGREMSADIFLGVVHYQRLRHMVSDKWQCRSTGAIDNVTHQPVKGRKRGGGV
RFGEMERDALIAHGASFLLQDRLLHCSDKISTIICKSCGTLLGPVADIRKQDNDAINRTA
ATCRLCKDKAAIENIQIPYIFKYLVAQLSSVNINVKMNLSSI
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaattccggttttaacgaattccaaaaaggaattcacccaaaagaaattagaa
caaaataaaattttgttatctttaggagctcctcatgttgattccttcaattatatgctt
gacgagggattagcagactgtgcaaagaacattcatcccgtagaatttgaaattcctgga
ggtgatcgtgtaaaattatttattgaaagtatatccattacacagccgcaagtaccaacg
tcatatctaaatgcacgtaataaaaagatctatccaacggaatgtagacaaagagctggc
acttacactgggacatgcacagtgggcgttggttggtcattgaatggtgtttgtcaacct
atagttgacaaaccaatgggtgaaattcctattatgcttcgttcaaaagcatgtaatttg
aatggactaaccccagaacaacttattaaacgcggtgaacatgaaaatgaatggggcggc
tactttattatgaagggtcatgaaaaactcattcggatgctgttaatgacacgtaaaaat
tttccgattgctgttcaaagaaacacatggaaagatagaggtcaacactttggtgatgtt
ggtattatggtgagaaccgtgaaaactgatcaaacggcaactacaaacgtacttcattac
ctgacaaatggcacagcaaaattcatgtttacttatcgaaaaacattctcatttatccca
gtaattcttttattgaaatcgttgaaaaattgtacggacgaatacatataccaacgtcta
atcgctggttatgaagatgatcagtactacgaaggttgtatacaaaaaatgttacgaagt
gttcatgatgaaactgggatgcatatccatgaagattgtaaaagatatttgggcgaagta
tttcgttcgaaattttatcatttgccagcatggaaaagtcacgaagaaatcacagattat
atgttaaacgaatgtattctcattcatctcgacgatcatgatgacaaatttaatttaatt
gtcttaatgacacaaaaactattccaatgtgctcaaaataaatataaaatagaaaattcc
gatagcgtcatgatgcaagaagtgctacttggtggtcatttataccaaaaagtcattaaa
gatcgaatcgaaaattggctggaacaattgcgttttgcaattttgaaacaagcagagcaa
acaaacttcgtactcaacttagcaaattttatgcaggcgtgtaaaattgccggatcaatt
gaacgaactgtttcaaattttctatcaactggaaatcttgtttcaaaatcaggattggga
ttgatgcaagcatctggattagttattatggctgaaaatattaatcgaatgcgttatatg
tcacattttagagctgtccaccgcggttcattcttcgtagaaatgcgcacaaccgaagca
cggcaattactaccagatgcatggggtttcatttgtccagttcacacgcctgatggttca
ccttgtggacttttaaatcatttaaccatagactgtgtggtttccgatacaccaaaacag
tcacttgtcgataacgtaccaagagttctcgttaatttgggaatggttcctctaaataca
acacgaatcacctataagaagcatttcgttgttatgttggaaggtagagttatcggtcac
attaacaaaagtatggcacaacaagtttgcgttgagctacgtctcttaaaaatggacgga
aagcaagttcccaaatttatggaaatcgtactagtgccagatataaagaatggccaattc
cccggtttattcttattcattggtccagctcgtatgatgcgaccggttaaaaacttgaaa
gcaaataaaattgagtatattggttcatttgaacaagtttacatgaacatatgtattgac
gctgaagaagcatatgaaggtgttacaacacatcaagaaatatcaaaaaccgctttcatg
tcaaatttggctaatttgattccgatgcctgattgtaatcagtcaccccgtaatatgtac
caatgtcaaatgggaaaacaaactatgggaactccaacacacacatggcaattacaatca
gagactaaattgtatcggcttcaatctcctgcaactccactatttcgaccagttcaccac
gataatattgaaatggatgatttcgcaatgggaaccaatgcaattattgcggtgatttca
tatacaggctatgacatggaagatgccatgataattaacaaatcggcagacgaaagagga
tttgcccacggaagtatttataagtcacaattcatcgaattggacggtactagtttcttt
gcgcgaaatccacatgataaaaaactagataaattcattgataatgacggtcttccatat
cctggacgcaaaattaaaccattggaaattctatattgtttttttgatacaaatgaaagt
gtgtataaaacaaaaaaatataccggcagtgaagattgtgtggttgacaatatcaaatta
tgtggaacattaaatacggattcgaaaaaaattgtttgtttgactcttcgtgtaccgaga
aatccgacagttggtgataagtttgcgagtcgtgctggtcagaaaggaattttgtcacaa
aaatggccaactgaagatctaccatttaccgaaagtggtctcattccggatattgtattt
aatcctcatggttttccttcccgtatgacaattgcgatgatgatcgaaaatatggcggga
aaaagtgctgcactgcatggatttgtacatgatgcgacaccctttagatttgacgaaaaa
aacacagcaattgatcattttggacgacttctgcaagctggtggatacaactattatgga
actgaacgtgtatatagtggaatagatggacgcgaaatgtctgctgatattttcttaggt
gtcgttcactatcaacgactgcggcatatggtttcagataaatggcaatgtcgatcaaca
ggtgccattgataatgtgacacatcagcctgtaaaaggacgaaaacgaggtggaggtgta
cgttttggtgagatggagcgagacgcattgattgcacatggagcctcatttttattacaa
gaccgccttctacattgttccgataaaatttcgacaataatttgtaaatcatgtggcact
cttcttggacctgtagcagatataaggaaacaagacaacgatgcgatcaatcggacggcg
gccacatgtcgtttatgtaaagataaagctgctattgaaaatattcaaataccatacatc
tttaaatatcttgttgcacaacttagctcagttaacattaatgtaaaaatgaacttgtca
tcaatctaa
DBGET
integrated database retrieval system
