Contarinia nasturtii (swede midge): 116346298
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Entry
116346298 CDS
T08003
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116346298
03036 Chromosome and associated proteins [BR:
cns03036
]
116346298
Membrane trafficking [BR:
cns04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116346298
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
116346298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_2
RhoGEF
PH_19
Beta-prop_LRRK2
SOS1_NGEF_PH
PH
Motif
Other DBs
NCBI-GeneID:
116346298
NCBI-ProteinID:
XP_031632115
LinkDB
All DBs
Position
Unknown
AA seq
1504 aa
AA seq
DB search
MFFINFSRCRSFDSADIVRNTNNNPETPDSIHEPKLNSGAWEDPLPISNATKGNNNHLHS
IGSRRSEPFSALRLNNKLNTNPLSSVAAAAAAAASLQNGNFTLNTIHQNFKNRKRLEHTP
SSRTVSSDEGWCSERGSEHDFSSDGEDEDKKSISSLTSVNTRNSHLRSTLNKAKQHLSFD
KWRSGGTSNNHSNTSSTMPPPQPEILSPGESSPGGRLSRWFSIRRGSAHQYDFGASKQSG
RDSRAGSIESEEKSKQSGTLNGTTINGYKMPLLPETDEVDGTLLGAFNGRNSQSNIDAIN
RQINLTLPATPPSGLSQQQLKRRHIFAAIVHSECSYVATLQRLVNGLKKPLEESSPSILN
SSKIATLFHRLPEILHCHTLFRIALAECVRNWDREEKVADAFISSFGKPIILEIYSGFIN
NFSVAMELAKMEAKRKSALADFFKVKQISAHDRLSFFGLMVKPVQRFPQFILFLQDLLKY
TPQGHHDRMSLQLALTQLESLAEMLNERKREAEQYQAFKEMLGNISGTFNTRALSSEGNR
NRYLLREDNVTHLEFNQSGFIVKSKQRRLLLLNDKVICVSVAPKLSNEFGATEKLSFKWM
YSVNEVEIVDNNTSATLSRILTAGLNRGGSLKSNGSGINDTLSSSSSSSSPASSQGSPTN
GADNLCSEMSNLMHDYEVISRINDLIGSLKGNYSDINTDLTKKTLAIIQSSIQKKDEEMA
WVDSCCLQLIVRTKNGKEETFTFQTEDPSVKKEWITELRLAQLSLDPNNSPAWEMPEREH
RSPSTKLPLFVKAQSVHKSHHQTEVRCGCYYTTTNHNRTSTRRRSKSQNYAWICTTDGIS
SHTTILLQHHQRAGELKEVGSFDLVETIVTSMEFVKGINNLNPQEEQNEKSLIDGDSVWM
GTTSKKIFIYSATNPEQDKQIAVCAVPAAVTQIVFHMDSTFVALIDGTVQIFRRGYDGHW
LLKEPQTVSLGVSEPITSILSINANVYAGCGQKVYVLNGCSGEIQKSFDVNREQSNGTAH
TVHYMAHSGIGLWISLKNSSVICLYHTETFKHLQDINIASNVLRVTSSQRDCANNNSSVF
VTALNASKGLLWVGTNVGISLTIPLPRLEGVPIISGAVNISYHAHFGPVTFLMPLLPKSY
YKPLPSEPLPTTTVQQQNFDEDEKLADENAVTLRKSENEDQSQKSNTRDSTQHKKTERSN
SQDMSARLKAQLVQSPVVLRRRRGKDELSRGSKTLPRGLGSAAAFTASMHSNTSSSQGSD
HSGCDVYGLYGDLIFVKEDYDNVEQGQGTLMDPSYESLRRSEPELAAIATKVTTLDRRLR
LKVSRPRSLDLSNWSVDSRSSSLYTSSGSEESMAIRQGLFSSRSVSRNSSNASHKTGTFD
LMNICENSTDIQIAPTTPSASTPPLATSTLNRPLKQLPKVEHEKVQTVAAATLKKKKNNK
NSNVSNESILGRRTVITLTGGRGYINWKHVWYNYPMDKSHKSNQTMARAPNSNDAHVVMW
EKKL
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcattaatttttcacggtgtcgctcctttgatagcgccgacatagtgagaaac
accaacaacaatccggagacacccgattcaatccatgaaccaaaattaaattccggcgct
tgggaagatccgttgcccatatcgaatgcaacaaaaggcaataacaatcatttgcattcg
atcggatcgcgtcgttcggaaccattttcagccttgcgtttaaataacaaattaaatacg
aatccattaagttcggtagcagccgctgctgctgcagcggccagtctacaaaacggcaac
ttcacattaaacacaatacatcagaattttaaaaatcgtaaaagactggaacatacacca
tcatcacgaacagtcagttccgatgaaggctggtgctcggaacgtggttcggagcatgat
ttttcatccgatggcgaagatgaggataaaaaaagtatcagtagtcttacatcagtcaac
acaagaaacagtcatttacgatcgacactaaataaggcaaaacaacatttatcatttgat
aaatggagaagtggtggcacgtccaacaatcactcaaatacatcatccacaatgccacca
ccacagccagaaatattatcgccgggcgagtcatcgcctgggggtcgattatccaggtgg
ttttccatacgtcgcggttcagcgcatcaatatgatttcggtgcaagtaaacaatccgga
cgtgatagccgagcaggtagcattgagtccgaagaaaagtcaaaacaatcaggaacatta
aatggaaccacaataaatggctataaaatgcctttattgccagagaccgacgaagtcgac
ggaacattgttaggagcatttaatggacggaatagtcaatcaaatatcgatgccattaat
cgtcaaataaatctcacattaccagccactccaccgtccggcctatcgcaacaacaattg
aaacgacgacatatctttgctgcaatcgttcatagtgaatgctcttacgttgcgactctt
caacgtctagtcaatggtttaaaaaaaccgcttgaagaaagtagtccatccatactcaat
tcgtccaagattgcaacactattccatcgtttgccggaaattttacactgtcacactcta
tttcgaattgctttagctgaatgcgttcgaaattgggatcgtgaagaaaaggtggccgat
gctttcatttcatcgtttggcaaaccgattattttggagatttatagcggtttcatcaat
aatttctctgttgccatggaacttgcgaaaatggaagcaaagcgaaaatcggctctagca
gatttctttaaagtcaaacagatcagcgctcacgatcggctttctttctttggattgatg
gtgaaaccagtgcaacgttttccacaattcattttatttttacaagacttattaaaatat
acaccacaaggtcatcatgatcgtatgtcgttacaattagcattaacacaattagaatca
ctggccgagatgctaaatgaacgaaaacgtgaagccgaacaataccaagcgttcaaagaa
atgttgggcaatattagtggcacattcaacacccgtgcgttatcatcagaaggaaatcgc
aatcgatatctcttgcgcgaagataatgttacccatttggaatttaatcaatccggtttt
atagtgaaatcaaaacaacgtcgattacttctactgaatgacaaagtcatttgtgtatca
gttgcacccaaactatcgaatgaatttggcgcgacggaaaaactctctttcaaatggatg
tattcggtaaatgaagttgaaattgttgacaataacacatcagcaacattatcaagaatt
ttaactgccggtttgaatcgtggaggaagtttgaaatcaaatggttctggaataaatgat
acactgtcatcatcatcgtcatcatcctctccagcttcaagtcaaggatcaccaacaaac
ggagccgataatttatgcagtgaaatgagcaatttaatgcatgactacgaagttatatca
cgtataaatgatttgattggatcgctgaaaggcaattatagtgatataaatacggattta
acaaaaaagactctcgccataatacaaagttcgatacaaaagaaagatgaagaaatggct
tgggttgattcttgttgtctccaattgattgtacgtaccaaaaatggcaaagaagaaacg
tttacatttcaaacggaagatccttctgttaaaaaagaatggataacggaacttcgtttg
gcacaattgtctctggacccaaacaattcaccagcatgggaaatgccagaacgcgaacat
cgatcaccatcgacaaaattaccgttgtttgtaaaagcacagtctgttcacaaatcacat
catcaaaccgaggtccgatgtggctgctattacacaacaacgaatcacaatcgaacatca
acacgtcgccgctcaaaaagccaaaactatgcctggatatgtacaaccgatggaataagt
agtcatacaacaattttattgcaacatcatcaacgtgctggtgaattaaaagaagttggc
tcatttgatctggttgagacgatcgtcacttcgatggaatttgtaaaagggataaataat
ctgaatccacaagaagagcaaaatgaaaaatcattgatcgatggtgattcagtgtggatg
ggaacaacgtcaaagaaaatcttcatttactcagcgacaaatccagaacaggataaacaa
attgctgtttgtgctgtgcctgctgctgttacacaaatcgtatttcatatggatagtact
tttgttgcattaatcgatggaaccgttcaaatatttcgtcgaggctatgatggtcattgg
ctactcaaggaaccgcaaactgtttcgttaggtgtgtccgaaccaatcacaagtattctg
tcgataaatgcaaacgtctacgctggttgtggacaaaaggtctatgtacttaatggctgt
tcgggtgaaattcaaaaatctttcgatgtaaatcgtgaacaaagtaatgggacagctcat
actgttcattatatggcacattctggaatcggtttatggatttcgttaaagaattccagt
gtgatctgtttatatcataccgaaacatttaagcatctccaagacatcaatatagcaagc
aatgtgcttcgtgtaacatcatcacaacgcgactgtgctaataacaattcttctgtcttt
gtaacagctttaaatgcatcgaaaggacttttatgggttggcacaaatgttggcatctca
ttgactatacctttgccacgacttgaaggtgtgccaatcattagtggtgctgtgaatata
tcataccacgctcattttggtccggtcacatttttgatgccacttttgccgaaatcatac
tacaagcccttgccatctgaacctttaccaacaacaacagtacaacagcagaattttgac
gaagacgaaaaattagctgatgaaaatgcggtcacactgcggaaaagtgaaaatgaagat
caaagccaaaaatcaaatacaagagattcaacacaacacaaaaaaaccgaaagaagtaat
tcgcaagacatgtcggccagattgaaagcacaacttgtccaaagtcctgttgtattgcgt
agacgtcgcggaaaagacgaactatcacgtggatcaaaaaccctaccaagaggactcgga
tcagcggcagcttttactgcttcgatgcattcgaatacgtcatcttctcaaggttctgat
cacagtggttgtgatgtttatggactttatggtgatttgatttttgtcaaagaagactat
gacaatgttgaacaaggccaaggaacattgatggatccgtcatacgaaagccttcgaaga
agtgaaccagaacttgcagcaattgccacaaaagtaacgacattagatcgacgtttacgc
ttgaaagtaagccgcccacgatcattagatctatccaattggtcggttgattctcgatct
tctagtctatatacgtcgtctggcagcgaagaaagtatggcaatacgacaaggattgttt
tcaagccgaagtgtatctcgaaacagcagtaatgcaagccataaaactggtacatttgat
ttaatgaatatttgcgaaaacagtactgacattcaaattgctccaacgacaccatcggcc
tcaacgccaccattagccacatcgactttgaaccgaccattgaaacagttgccaaaagtg
gagcacgaaaaagtgcaaacagtcgccgcagcaactttaaagaaaaagaaaaacaacaaa
aattcgaacgtatcaaatgaatcaattttgggccgaagaacagtaattactttaactggc
ggccggggatatataaactggaaacatgtgtggtacaattatcctatggataagtcacat
aaatcgaaccaaacaatggcacgagcaccaaattcgaatgatgctcatgtggttatgtgg
gaaaagaagctttaa
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