KEGG   Contarinia nasturtii (swede midge): 116346450
Entry
116346450         CDS       T08003                                 
Name
(RefSeq) probable tyrosyl-DNA phosphodiesterase
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
cns  Contarinia nasturtii (swede midge)
Pathway
cns03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cns00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    116346450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cns03400]
    116346450
DNA repair and recombination proteins [BR:cns03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     116346450
SSDB
Motif
Pfam: Tyr-DNA_phospho zf-CCHH K_trans_C
Other DBs
NCBI-GeneID: 116346450
NCBI-ProteinID: XP_031632365
LinkDB
Position
Unknown
AA seq 581 aa
MEKLTSKQRTKPTFVCQYGKNCYRKNPHHFMEYTHEHLEKIMKQNTTHHLEQFKIPDELI
SHKELIIDQIKIIEELFPTNKSNEEPLAKKNKPDKALAISSHSNESNGVDKISLNSASTS
QQSASVSKFDIHQYIKVVTPKGKMKEKLDAAQPFNFFLTSITSSPPTHNEPLSITFQEIL
DSSLGELESSVQINFMVEIGWLLGQYYFAGCLSKKLLILYGTKSPDLENIHKTKPQVTAI
EIKMPTPFATHHTKMMLLGYKDGSMRVVISTANLYEDDWHNRTQGIWISHALHPLHEGSD
TAAGESPTEFRNELLKYLSSYKLPQLQPWLVRIRKTNFSEVNVFLVTSIPGAYQSTNGHF
AHGHGKVSWLLSKHAAPIEDSSPIVAQSSSLGSFGASPDSWLTSEFVNSFRRDTREIGLR
KIPSVRIIYPSFNNVANSHDHLIGGGCLPYGNQTHQKQLWLNDFFYQWRADCRYRTKAMP
HIKTYCRWTDKKLFWFILTSANLSKAAWGQKNKSLTNPSLRISNYEAGVLFLPKFVTNTR
YFSMDESDCSTPMFPPVYDVPLTKFVVDDTPFLSDILFPTN
NT seq 1746 nt   +upstreamnt  +downstreamnt
atggaaaaattaacgagtaaacaacgtacaaaacctacttttgtttgtcagtatggtaaa
aattgttatcgcaagaacccgcatcatttcatggaatacactcacgaacatctggagaaa
ataatgaaacaaaatacaacgcatcatctcgaacaattcaagattccagacgaattgatt
tcacacaaagaactaattatagatcaaataaagataatcgaagaattatttccaacgaat
aaatcaaatgaagaaccacttgcaaagaaaaataaacccgataaagcgctggcaatctca
tcacattccaatgaatctaatggagtagataagatttcgttgaattctgcctcaacatca
caacaaagtgcttcagtgtctaaatttgacatccatcaatatatcaaagtcgttacgccc
aaaggaaaaatgaaagagaaattagacgcagcgcaaccatttaatttctttctcacttca
attacatcatcgccaccgacacataatgagccgctttcaattacttttcaagaaattcta
gattcttcactcggtgaacttgagtctagtgtgcaaattaattttatggtggagattggt
tggttgcttgggcaatactattttgcagggtgcttgtctaaaaaattgctaatattgtat
ggaactaagtcacctgacttagagaacatccacaaaaccaaaccacaagttactgcaata
gaaatcaaaatgcccacaccgtttgctactcatcatacaaaaatgatgctactgggttac
aaagatggatcgatgcgtgtagttatctcaaccgctaatctatacgaagatgattggcat
aatcgaacacagggaatttggatttctcatgcattacatccattacacgaaggcagtgat
acggctgctggtgaaagtccaactgaattcagaaacgaacttttaaaatatctttcgtct
tacaaattgccccaactacagccttggctagttcgcattcgtaaaacaaacttttcggag
gtaaacgtatttttagtgacatctataccaggtgcatatcagtcaaccaatggacacttc
gctcacgggcatggtaaagtttcttggttactatcaaagcacgctgcaccgattgaagat
agttcacctattgttgcacaaagctcttcacttggaagctttggtgcgagcccagattca
tggctgacatctgagtttgtaaatagttttcggcgagatacaagggaaattggattaaga
aaaataccgagcgttcgaattatttatccttcatttaacaatgttgcaaattctcatgac
cacctcattggtggtggatgtttaccttatggaaatcaaacacatcagaaacaactatgg
ttgaacgattttttttaccaatggcgagctgattgtcgttatagaacaaaagcaatgccg
cacattaaaacatattgtcgatggacagataaaaaattattttggtttattttgacatca
gctaacctctccaaagcagcatggggacaaaaaaataagtcattaactaacccaagtcta
cgaatcagtaactacgaagccggtgttttgtttcttccaaaatttgttacgaatacacgc
tatttttcaatggatgaatctgattgcagtacaccaatgtttccaccagtttatgatgtt
cctctcacaaagtttgttgtagatgacactccttttttgagtgatattttgtttccaacc
aattaa

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