Contarinia nasturtii (swede midge): 116346479
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Entry
116346479 CDS
T08003
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cns03021
]
116346479
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
116346479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
116346479
NCBI-ProteinID:
XP_031632412
LinkDB
All DBs
Position
Unknown
AA seq
1368 aa
AA seq
DB search
MAATATNLVEIQIESFVHKILNVTFLEEAFGCVIVHELNAATTKVQHLTEQMMKVLSGLT
ADQKENAFRSYVLLVAAENNLVHLKWLFQVVVQLVNANVITARMVCEQILSCDRLIHQNK
NFWIASFQLIRKIINLVDYKGVREIMKGCRDKIQSFPYNINSSIMPQMKAVESVIEHIFD
RNACLLPAYFIANEIQKSGPLHWKISQLTCSFVEDFRNVAQMISIIGHVHMLPIVEHFGY
TESLINPWKLDLNTLKFTHRGILPYDQELYQPQKNLLRYVLEQPYSKDMVSTMLNLPKPN
KQHIAAIEEQLVWLIISAMERTEEEPLKSNDNEDSFDSIHWLWAHISSQLIYFVLLQYAS
FPNIVSTLHEKLTVKNLRKGRDYLMWSLLQFISGSIQRNPVSNFMSVLSLFDMLYPEKEP
LPVPDCTKTYATRQMAPTFIWIHLEKKAKSDRINLHRDVPNSLKKHHEFLKHLMMTNSQL
TMGTDFTIVLLCNAYSTNPDYFTRPMAALFETINKTPGGATQPTVPLSMVTLDSLTVHAK
MSLIHSIVSHIIKAAQSKNTVPVGSNMAPALVETYSRLLVYTEIESLGIKGFLSQLLPTV
FKSQAWGILHTLLEMLSFRMHHIQSFYRVQFLSHLHSLASVPHTNQTQIHLCVESTALRL
ITGMGSAGSAEVQPQLSRYFADSKIPGSVVSTESEELNRALILTVAHAMHITGSGVEDQS
NAWCKELLSSIMQHTPHSWAPHTLQCFPPILNNFFTQNTIPKENKQLLKKCVEDEYRNWA
QMTNENDVITHFTTPGTPPLFLCVLIKMILETDSINAVAYKVLERIGARALSAHLRKLCD
YLAFDFTISGQNNLNISKLIDAVNSLMWKYNVVTLDRLVLCLAIRTQEGNEAQVCFYIIQ
LLLLKSNEFRNQVVDFVRENSPDHWKQSNWHEKHVAFHQKYREKFSPDESVTHNQLPVYF
GNLCLRFLPVLDIVIHRFLEVPINSVNKSLESILSHYGCLYKFHDRPVTYLYNTLHFYER
KLRDRPALKKYLVNAIIGSLAEIRPPNWVLSEQYQTFFQKADIEEVHWQPDISYYISHVR
RIADTISGKNVFYISDWRFNEFPNAPAHALYVTGVELLSLPVSPTIVANNIIDVIVKGYT
VIPHNEIHGWINVVGLLLTALPKCYWSVIYDRLQDVLKSEKMTEWPYRFSPFEMFNFKTV
TEAMIERKYILLLAVAHSILHHSSIGQMVTIAEFIKEKLKPHVLKEHQLIYVCHLFGPFM
LRLDHERPRLGYDLTNLLYELLEQVDRNHGSEPLKYMDSICDLLYHIKYMFVGDMLKTET
EVIIRKLRPELQMRLRFISHLSVDEISASSGHKYIPQPPVEISPPLKT
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaccgcaacaaacttggtcgaaattcaaatcgagagttttgttcataaaata
ttgaatgtcacatttttggaagaggcatttggttgcgttattgttcacgagctaaacgct
gcgactacaaaagttcagcatttgacagagcaaatgatgaaagttctgtctggtttgact
gcagatcaaaaagaaaacgctttccgaagttatgttctattagtagcggctgaaaataat
ttggtacacttgaaatggctttttcaagtggtcgtacaactggtaaatgcaaatgtaatt
acagccaggatggtgtgtgaacagattttatcgtgtgaccgattaatccaccaaaataag
aacttttggatcgcatcatttcaattgattcgaaaaattatcaatcttgtggattacaaa
ggtgttcgggaaataatgaaaggatgtcgcgataagattcaatcatttccatacaacatc
aattcaagtattatgcctcaaatgaaagctgtcgaaagcgttattgaacatatatttgat
cggaatgcatgcctgttgcctgcctacttcattgccaatgaaatacaaaaatcgggacca
ttgcattggaaaatttcacagttgacttgcagttttgtcgaagattttagaaatgttgca
caaatgatttcgattattggacacgtgcacatgctgccaattgttgaacatttcggctac
actgaatcactgatcaatccttggaaattggacttgaacacactgaaatttacacatcgc
ggaattttaccatacgatcaagaattgtatcaaccgcagaagaatcttttgagatatgtt
ttagagcaaccatattcaaaggatatggtatcgacaatgttaaacctcccaaaaccgaat
aaacaacacattgccgcaattgaagagcaattagtctggttaattatatcagcgatggaa
cgcacagaagaggaacctcttaaaagcaatgacaatgaagacagttttgacagcatacat
tggctatgggcacatatctcctcacaattaatctattttgttttgcttcaatacgcaagt
ttcccaaacattgttagcactttgcatgaaaagttgacagtgaaaaatcttcgaaaaggt
cgagactacttaatgtggtcacttttacagttcatctcaggcagtatacaacgtaatccg
gtatcaaacttcatgtcagtgttgagtttatttgatatgctctatccagaaaaggaaccg
ctgccagtacctgattgcaccaaaacttatgcaacacgacagatggctccaacatttata
tggattcatttggagaagaaggccaaatcagatcgcataaatttacatcgtgatgtacca
aattcgctgaagaaacaccatgaatttttaaagcatttaatgatgacaaatagtcaattg
acaatgggtactgattttacaattgttttactatgtaatgcatactcaacaaatccagac
tatttcacacgaccgatggccgcgttgtttgaaaccataaacaaaacacctgggggagca
acacaaccaacagtaccattatcaatggttacgcttgatagcttgacagttcatgcaaaa
atgtcactcattcacagcattgtgtcacacataataaaggctgcacagtcgaagaacaca
gttccggttggttcaaatatggcaccagcattggttgaaacatattcacgattacttgta
tatactgaaattgagtcgcttggcatcaaaggatttttaagtcaactgttgccgacagta
ttcaaatcacaagcatggggaattttacatactttgcttgaaatgctatcatttcgaatg
caccatattcaatcattttatcgtgttcaatttttgagtcatttacattcattagcatct
gtaccgcacacaaatcaaacacaaattcacctatgcgtagaatcaacggcattgcgtttg
attacgggcatgggttcagcaggttcggcagaagtgcaacctcaactctcccgatatttt
gctgattcaaaaatacccggtagtgttgtatcgacagaaagtgaagaattgaatcgtgct
ctcattttaactgttgcacatgcaatgcacattaccggttcaggtgttgaagatcaatcg
aatgcttggtgcaaagagttactttcatcgattatgcagcatacaccgcattcatgggcg
ccacacacattgcaatgttttccaccaatcttaaacaatttcttcacacaaaacaccatt
ccaaaagagaacaaacaattattgaagaaatgtgtcgaagatgaatatcgtaattgggcc
caaatgaccaatgaaaatgatgtcatcacacatttcactacaccaggaacaccaccccta
ttcctatgcgttctcattaaaatgattttggaaaccgacagtattaacgcggtggcatat
aaagtattggaacgaattggtgctagagcattatcagcccatcttcgaaagttatgcgat
tatttggcgttcgatttcacaatatctggacaaaacaacttaaacattagcaaacttatt
gatgcagttaatagtttaatgtggaaatacaatgtggttacacttgatcgacttgttttg
tgtttggccataagaacgcaggaagggaacgaagcacaagtttgtttctatatcattcaa
ctgttattgttgaaatcaaacgaatttcgtaatcaagtggttgattttgtaagagaaaat
tctcccgatcattggaaacaaagtaactggcatgagaagcatgttgcattccatcagaaa
taccgtgaaaaattctcacctgatgaatcagttacgcataatcaattgccagtgtatttc
gggaatttgtgtctacgctttttgcctgttctcgatattgtaattcatcgttttctggaa
gtaccaataaatagcgtaaataaatctctagagagcattttaagtcattatggttgtctg
tacaaatttcatgatcgacccgttacttatttgtataatacattgcacttttacgagcgt
aagctccgtgaccgacctgcattgaaaaaatatttggttaatgcaatcattggttctttg
gctgaaatacgtccaccaaattgggtactgagtgaacagtatcaaacttttttccaaaaa
gctgatatcgaagaggtgcattggcaaccagacatttcttactatatttctcatgtgcga
cgtatagctgacacaatttctggaaaaaatgtattctacataagtgattggcgttttaat
gaatttccaaatgcaccagcgcatgcattgtatgtaacgggtgtggagttgctgagtttg
ccggtgagtccaacgattgtggcaaacaatatcattgatgtaattgtgaaaggatacaca
gtaattccgcacaatgaaatacatggctggatcaatgtagttggattgctgttgacagcg
ttaccaaaatgctattggagtgtcatttatgatcgattacaagacgttttaaagtcagag
aaaatgaccgaatggccgtaccgcttttcaccattcgaaatgttcaattttaaaacagtg
actgaagcaatgatcgaacggaaatatattctactcttggcagtggctcattcaattttg
catcattcaagcatcgggcaaatggtcacaatcgctgaatttatcaaggaaaagttgaaa
ccacacgtgttgaaagagcatcaattaatatatgtttgccatttatttggacctttcatg
ctccggctggatcatgaacgcccacgacttggttacgatttgacgaatttattatacgaa
ctgcttgagcaagttgacagaaatcatgggtccgaaccattaaaatacatggattcgatt
tgtgatttattatatcacataaaatatatgtttgtcggtgatatgctaaagacggagacc
gaagtaatcattcgcaaattacgcccagaacttcagatgcggttaagattcatcagtcat
ttgagtgttgacgaaatttcagcttcgtctggacataagtatattccacaacctccggta
gagatttcaccaccactcaagacttaa
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