Contarinia nasturtii (swede midge): 116346650
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Entry
116346650 CDS
T08003
Name
(RefSeq) dynein intermediate chain 3, ciliary
KO
K11143
dynein axonemal intermediate chain 2
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116346650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cns03037
]
116346650
04812 Cytoskeleton proteins [BR:
cns04812
]
116346650
Cilium and associated proteins [BR:
cns03037
]
Motile cilia and associated proteins
Dynein arm
116346650
Cytoskeleton proteins [BR:
cns04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
116346650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_SPT8
Beta-prop_VPS8
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
116346650
NCBI-ProteinID:
XP_031632676
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MSSTPDSQYVYYKQRREFGQQLFAFTEKDEIMVSIPPDEEIAKQYKLRDPVSRGTQFAKQ
MSCSEVNTERATYESHGINHTEGGWPKDICLSDPEQTTRYRRKIEKDELFISQVMNLTKP
MEHCIFQNNAINIYETFFENCEQAPLLEPCSSRTLNVYRDPCNPKRPVTHLSWSPDGGTK
LAIAHADTTFQTDANDNACDSFIWEVENPNTPLLNLKPPSPIICLEYNPKDATTLASGFL
SGQVGVWDTRADKSLVAISEREVCHHEAVNSVLWINSKTGTEFFSGSFDGRVIWWDTRKL
NEPLEKLLMDPIKTDEQVASRSYGVTVLEYETTMPTKFMCGTDVGMVFVCNRKGKSPMEK
INFRINTHLGPVCSIARNPSFLKNFLTVGDWTARIWSEDCRESSIMWTSYQPALLTNGIW
SPTKCSMFYISRMDGILDAWDLLQQHNEPVLSIKVCDEPLLCMKAFENGRFIASGSKNGA
TFLIEVSDNMTVSQKNDKQLLTNMFERENRREKILEAKSREIKLRVKTAQVAHDDNGESK
MNKSSAIDAACKQAEEEYLNAVRKAKEKFCPRKFKHKENADKGTKVDGDQSFSDGDLPES
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcactcccgatagccaatatgtttactataaacagcgtcgtgaattcggtcaa
cagttatttgctttcaccgaaaaagatgaaattatggtgtcaattccgcccgatgaagag
attgccaaacagtataaattgcgtgacccagtttcgcgcggcactcaatttgccaaacaa
atgagttgtagtgaagtgaacacagaacgagccacatatgaaagtcatggaattaatcac
acagaagggggttggccaaaagatatttgcctttccgatcccgagcaaacaacacgctat
cgacgaaaaattgaaaaagatgaattgtttattagtcaagtgatgaatctgacaaaacca
atggaacattgcatttttcaaaacaatgccatcaatatttatgaaacatttttcgagaat
tgtgaacaggcaccattgcttgagccatgctcatcgcgaacgctcaatgtttatcgcgat
ccatgcaatccgaaacgacccgtcacacatttatcatggtcgcccgatggcggcacaaaa
cttgccatcgcacacgctgacaccacatttcaaacggacgcaaatgacaacgcttgcgat
tcatttatttgggaagttgaaaatccaaacacaccacttttgaatttgaaaccgccaagc
ccaattatttgcttggaatataatccaaaagatgcgacgactttggcgagtggatttctt
tcggggcaagtaggtgtttgggatacaagggccgacaagagtttggttgcaattagcgaa
cgagaagtgtgccatcacgaggctgtcaactcggttttgtggataaattccaaaacggga
accgaatttttctccggatcgtttgacggacgcgttatttggtgggatacgagaaaatta
aatgaaccattggaaaaactactaatggatccgatcaaaactgatgaacaggtagcatca
cggtcatatggtgtaaccgttttagaatatgagactacaatgcccacgaaatttatgtgc
ggcactgacgttggaatggtttttgtatgtaatcgcaaaggaaaatcaccgatggaaaaa
atcaattttcggataaatactcatttgggtccagtgtgttcaattgcacgaaatccaagt
tttctcaaaaatttcttaaccgttggcgattggacagcacgaatttggtcggaggattgt
cgtgaaagttcaataatgtggacatcatatcaaccagccctattaactaatggcatttgg
agcccaacaaagtgttcaatgttttatatcagtcgaatggatggcattcttgatgcttgg
gacttattgcaacagcacaacgaacccgttttaagcatcaaagtatgtgatgagccgttg
ctatgcatgaaagcctttgaaaatggccgatttatagccagtggaagtaaaaacggtgca
acatttctaatcgaagtgtccgataacatgacagtaagccaaaagaatgataagcagctg
ctaacgaatatgtttgaacgcgagaacagaagagaaaagattttggaggcgaaatccaga
gaaatcaaattgagagtgaaaactgcacaggttgcccacgacgataacggcgaatcaaaa
atgaataagagcagtgcaattgatgcagcatgtaaacaggccgaagaagaatatttgaac
gccgtcagaaaggcgaaagaaaagttttgcccaagaaaatttaaacacaaagaaaatgcc
gataaaggcactaaagttgatggcgatcagagtttttcagatggagatttaccagaatcg
gattaa
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