Contarinia nasturtii (swede midge): 116346882
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Entry
116346882 CDS
T08003
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04136
Autophagy - other
cns04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116346882
04136 Autophagy - other
116346882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116346882
03029 Mitochondrial biogenesis [BR:
cns03029
]
116346882
Membrane trafficking [BR:
cns04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
116346882
Mitochondrial biogenesis [BR:
cns03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116346882
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
BCAS3_WD40
Beta-prop_IFT122_1st
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_RSE1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
MED16_beta-prop
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_HPS5
WD40_Gbeta
VID27
WDR54
Motif
Other DBs
NCBI-GeneID:
116346882
NCBI-ProteinID:
XP_031633005
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MSLSGGSQQNDSDSMGFFVNFNQDCSSLAVGCKNGFSLFSLNSIDSTLEEIYQSSGEEIT
IVERLFSSSLVAVVSLNAPRKLKVCHFKKGTEICNYSYANTILGVKLNRARLVVCLEESL
YIHNIRDMKVVHTIRDTPPNRRGLCALASDSDHCYLAYPGSPTVGQVQIFDAVTLQAKIM
IPAHDNPLAAITFSSAGTEIATASEKGTVIRVFSVEDGSKLFEFRRGVKRCVAISSLAFS
TCSKYLCCSSNTETVHVFKLERVSPEAKENNHKNEDWMGYLSKTVSSYFPTQVTDVFTQG
RDFATAVLPITGYSPISVITTIHRSLKLLVATQNGFLYVYDVSEVEGGDCKLIVKHNLRN
ISDSQPIKIADVQPNGSPLNNSPSTTSGGSNIGPSYASTVKAGTSDDDQ
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgagtggtggatctcaacaaaatgatagcgattcgatgggattttttgtaaat
ttcaaccaagattgctcatcgttggctgtgggctgtaaaaatggattctcactattttcc
cttaactcgatcgattcgacgctggaagagatctaccaaagttccggtgaagagataaca
atagttgaacgtttattcagtagttcattagtggctgttgtctctttgaatgcgcccaga
aaattgaaggtatgtcatttcaagaaaggaacggaaatatgcaactattcgtatgcgaat
acaattcttggtgtgaaattgaatcgggcccgtttggtggtgtgtttggaagaaagttta
tacatacataatattcgtgatatgaaagttgtgcatacaatacgtgatacgccgccaaat
cgtcgtggattgtgtgcacttgcatccgattcggatcattgttatttggcatatccgggt
agtccaacggttggtcaagtgcaaatatttgatgcagttacattgcaggccaaaattatg
attccagctcatgacaatccgttggcggccataacattcagttcggctggcaccgaaatc
gcaacggctagtgaaaaaggcactgtgattcgagtattttccgttgaagatggctccaaa
ctatttgaatttcgacgtggtgtcaaacgttgcgtggcaatatcatcattagcatttagc
acctgttcaaaatatttatgttgtagttcaaatacagaaacggtacacgtttttaaattg
gaacgggtctcaccagaggcaaaagaaaacaatcacaaaaacgaagattggatggggtac
ttaagtaaaacggtttccagctactttccaacacaagtcaccgatgtattcacccaaggt
cgtgactttgccacagccgttttaccgatcaccggttacagtccaattagtgtcattaca
acaattcatcgttccctaaagcttctggttgcaacacaaaatggttttctttatgtatat
gatgtgtctgaggttgaaggtggcgattgcaaattaattgttaaacataatttgcgcaat
atttcagattctcaaccgattaaaattgcagatgtgcaaccaaatggaagccccttaaat
aattccccatcgaccacttctggtggaagtaatattgggcccagttatgcatccactgtg
aaagcaggaacatcagatgatgaccaatga
DBGET
integrated database retrieval system
