Contarinia nasturtii (swede midge): 116346931
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Entry
116346931 CDS
T08003
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116346931
04121 Ubiquitin system [BR:
cns04121
]
116346931
Enzymes [BR:
cns01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116346931
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
116346931
Ubiquitin system [BR:
cns04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116346931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ltn1_1st
UBC_like
LTN1_E3_ligase_6th
zf-RING_2
zf-ANAPC11
zf-rbx1
FANCL_C
RINGv
ARM_TBCD_2nd
Motif
Other DBs
NCBI-GeneID:
116346931
NCBI-ProteinID:
XP_031633107
LinkDB
All DBs
Position
Unknown
AA seq
1779 aa
AA seq
DB search
MGGKTKHQQRTKNNTKPSSSGRSAELLASSTIPTVGFANVTQFGFLPTMLQDFSAVATDT
SNGIEDMDSSLDTNYQLVFRKMTKKDPITKVKALQEFSELILKTEPNIIKTILPFWPRLY
NNLSTDVEHRVREAAQQAQSALMTQAGKNIAPYLKQIAPAWITSQYDTYAPAASIATQSF
QKSFPAHKLQDVFNFCQNEILDYITKNLIVYTATTLSNPQSNTLEECEAKYQRVLICSLK
GYAMYLTKISDEHMQEASNKNTALIENQKFWSYQKHKNPGIRAAWFETMNVLLQSNVDLT
KYEKQLTVAALQNIDETETVVLPHLWTTVLLVMQRFVEWPTYINMEKALLPKLWKILKCG
GGGSAETIFPHFLPLLSKLNRDILGEKVLTFYGNFFENLNIGLCARLAYQANSRSDITAI
SNAYYECLQYIVIQVQGFSPEMFEDGQNASEYSLNLLQQHVIDVIGYLLTNHATINGKYV
LVRMVELIQFWNQNGGNNQIYSALLARFWTELYPTIENSFDKRTFEDQHLRSKLELVHDL
VQLLRSKSSNVNKIKSSKVKFNIDTDAEANDQIDGIAKKVSNDEITFFKDEISDLIVKLC
KFYMKKTSNSISDYYVRPLECLLHEFGTSATFFEQLCGSQEDIPKLYDKFASWLLLKEIR
SESVLDITLKLYPHLNATEKSKMLNKLLKFPNENVKNWTLTRLLSHPLCAEAEVIRLLSQ
PIVTEQIIKNARELITENANETINLMHKCFFQMESGHILIDNHTCESIIEILCNALIDPN
VDDNVLDTCVSFLSQVMPVICGDTKKVDIRNKMFVKLFDLCVDKNRLAMLNEDTLWEAVT
SWQDALSSNDIELTDDLLETCSNIIKDSLVAAISDQSTTINHIDTISEIVSKLILCSIER
FDDNDEQKYQHADKIIANLFAKFDTEYNMYLNGCLQACTFIELLNGNMTAVPSILSQLDN
DLGTLDVYKNANALLKLATFKFRTIFKITCTVPKSRKNSENETENEDDDDAEVDVVKPLD
EEHTEDFFDLNESLLKKWSDKIFAEIHGAIYIGGIFNSFLDNFNLSSTFEEFILYFQETV
HLFLTHIAEEKVDLIVKYWINAERLDDPFAVNSTLLLQEIGPYKSQENCLALLHNDLNKV
CNGTENLQQYINVLLTYTQKLSLRQLSISANIFDSSIEPHLRAIGLRCLLRNYFTSDSNE
IGDQQVVNECLNLIEELYVQSKTNKEFLLYNENILTVSDEKVLQITEYVRFLADVIQLFP
GNITEKGWDFIRIAISSWVLTLSKSSDHWKSPKIAVFTSAIYKMFEVLYGFIGEERAKSS
TRVVSQVIDEWEHVFAKDVNLILLKCFIRFIQANAAASDNRQEYFLKILSQAINHVDFKY
VEVAHKIDSKTSIDDLIQFCLTNLSHEYHIVRVGCATIIKRMMKYLIQSDTEQLSKRQEK
QTTLDDSTDSIEWHLLHKFRNILTAQNEWTQNFIEEFNFKLTELDDFSEIPCECSIPFML
LWHCILTICDDASSELRSIYASYLVEEKFDQTFLQMLFRMMPADEVLRSQEIKTTGSAYF
TAVTWQQIANDEITSERYACYLYTLALKYLPAVVRRWWTNSHPRQKSLVDKITTAFVSTQ
LCNDEFRALLDKNEKHDSFQITVHSTTREVHATYVIDEACMELIIQLPVNYPLGVVKVNC
GQQIGDKLQSRQVVMQLSIFLTHQNGSIWNGLSLWKRNLDRKFDGVEECYVCYSVIHQET
CQLPKLTCKTCKKKFHGQCLYKWFNTSNKSTCPICRNMF
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaaaaacgaagcatcaacagcgtacgaaaaataacacaaaaccatcgagtagt
gggcgatcagctgaattattagcatcatcaacgataccaaccgttggttttgcgaatgtg
acacagttcggttttttgcccacaatgttacaagacttttcagctgtggcaaccgataca
agcaatggcatcgaagacatggactcatcattggacacaaattatcaattggtttttcgt
aagatgacaaaaaaggatccaatcaccaaggttaaagcgttacaagaattcagtgagctc
attttgaaaaccgaaccaaacattatcaaaacaattttaccattttggccacgtttgtac
aataatctatcgaccgatgttgagcatcgggttcgtgaagccgcccaacaggcacaatcc
gcattgatgacacaagctggaaaaaatattgcaccatatttaaaacaaattgcacccgct
tggataaccagtcaatatgatacatatgcaccggccgccagtattgcaacgcaaagtttc
caaaaatcatttcccgctcataagctgcaggacgttttcaatttttgccaaaacgaaata
ctcgactatatcaccaaaaatttaatcgtttacacagcaacaactctatcaaatccacaa
tccaatacactggaagaatgtgaagcgaaatatcaacgtgtactgatttgtagtttaaaa
ggatatgcaatgtatttaacaaaaatttcggacgaacatatgcaagaagcgtccaacaaa
aatactgcgttgattgaaaatcaaaaattttggtcatatcaaaagcataagaatcccggc
attcgagctgcatggtttgaaacgatgaatgtattattgcaatcaaatgtggacttaaca
aaatatgaaaagcaattgacagtggctgccttacaaaatatcgacgagactgaaactgtt
gtgttgcctcacctttggacgacagtattattggtgatgcaacggttcgttgaatggccc
acctacataaatatggaaaaagcgttgttaccgaaattgtggaaaattttgaaatgtggc
ggcggtggtagcgccgaaacaatttttccacactttttgccattgttatcaaaattgaat
cgtgatattcttggcgaaaaggtacttacattctatggcaatttctttgaaaatctaaac
attggtttgtgtgcacgtttggcttatcaagccaacagtcgatcagatattacggctata
tcgaacgcatactatgaatgtctacaatacattgtgattcaagtgcaaggcttttcaccc
gaaatgtttgaagatggccaaaacgcaagtgaatacagcttaaatttactgcaacaacat
gtgatcgatgttattggttatctgttgaccaatcacgcgacaataaatggtaaatacgtt
ttggtacgtatggtcgaactgatacaattttggaatcaaaatggtggcaataatcaaatt
tatagcgctctattggctcgattctggacagagttatatccaacgattgaaaattccttt
gataaaagaacatttgaggatcaacaccttcgttcaaaacttgagctggtacatgatttg
gttcaattgttgcgatcaaaatcatcgaatgtaaataaaatcaaatcgtccaaagtgaaa
ttcaacatcgacaccgatgcggaggcaaacgatcaaattgatggcatcgcgaaaaaagtg
tccaacgatgaaatcacattcttcaaagacgaaatatccgatttaattgtaaaattgtgt
aaattttatatgaaaaagacatcgaatagtataagcgattattatgtacgaccattggag
tgtttgctgcatgaatttggcacaagtgcaacatttttcgaacaactttgtggttcgcaa
gaggacataccaaaattatatgataaatttgccagttggttgctcctcaaggaaatacgc
tccgaaagtgtactcgatattacattgaaattgtatccacatttgaatgcaaccgaaaag
tcaaaaatgttgaataaactattgaaattcccaaatgaaaatgtaaaaaattggacccta
acacgattgctgagtcatccgttgtgcgctgaagcagaagtgatacgtcttctttcgcag
ccaattgttaccgaacaaataattaaaaatgccagagagttgatcaccgaaaatgccaac
gaaaccataaatttgatgcataaatgcttctttcaaatggaaagcggtcatattttgatt
gataaccatacatgcgaaagtatcattgagattctctgtaatgcattgatcgatccaaat
gtcgatgacaatgtattggatacgtgcgtaagtttcttgtcacaggtgatgccagtcatt
tgtggtgacacgaaaaaagttgacattcgcaataaaatgtttgtaaaattgttcgatttg
tgcgttgacaaaaatcgcctggccatgttaaatgaagatacactctgggaagcggttacc
tcatggcaagatgcattgtccagcaacgatatcgaattaaccgatgatctattggaaaca
tgttcgaacataatcaaagatagcctagtggcggctatttcagatcaaagcaccaccatc
aatcacattgatacgatttctgaaattgtatcaaaattgattttatgttcaattgaacgg
tttgatgataacgatgaacaaaaataccaacatgccgacaaaataattgcaaacttattt
gccaaattcgataccgaatacaatatgtatttgaatggttgccttcaagcgtgcacattt
attgaattattaaatggtaatatgacggccgttccatcgatactgtcacaattggacaac
gatttaggtacgctggatgtgtataaaaatgcaaatgctttactaaaattggcaacattc
aagtttcgtacgatattcaaaatcacatgtaccgtgcccaaaagccgcaaaaatagcgaa
aatgagactgaaaacgaagacgatgatgacgccgaagtggatgttgtaaaaccattggat
gaagagcacaccgaagactttttcgatttgaatgaatcattgttgaagaaatggtcggac
aaaatctttgcagaaattcacggtgcaatttatataggcggaatattcaatagctttttg
gataatttcaatttgtcatcgacattcgaagaatttatcctttacttccaagagacagtt
cacctatttttgacccacattgccgaagaaaaagttgatcttattgttaagtattggatc
aatgccgaacgacttgatgatccatttgcggtgaatagcacgttacttttacaagaaatc
ggaccgtataaaagccaggagaattgtttggccttacttcacaatgatctaaataaagtt
tgcaatggcaccgaaaatttacagcaatacatcaatgttttgttgacgtatacacagaaa
ttgtcgctgcgacaattatcgatcagtgctaatatctttgacagttcaatcgaaccacat
ttaagagcaattggtttgcgatgcttgttgaggaactacttcacatccgatagcaatgag
attggcgatcaacaagttgtcaacgaatgtctgaatcttattgaagagctttacgtacaa
tcaaaaacaaataaggagtttttactttataacgaaaatatattgacggttagcgacgaa
aaagtgcttcaaatcaccgaatatgtacgatttttggctgatgttattcaattattccct
ggtaacatcaccgaaaagggatgggatttcattcgtattgcaattagctcttgggtttta
acactgtcgaagagcagtgatcattggaaaagtccaaagatcgctgtgtttacatcagca
atttacaaaatgttcgaggtgctgtatggattcatcggagaagaacgtgccaagagttca
acaagagtcgtgtcccaagtgattgacgaatgggaacacgttttcgcaaaggatgttaat
ttgattctattaaaatgtttcataagattcattcaggcaaatgccgcagctagtgacaat
cgtcaagagtatttcttgaaaatattgagccaagcaataaatcatgtagactttaagtac
gttgaagtggcgcataagatcgattcaaagacgagcatcgacgacttgatacaattttgt
ttaacaaatttatcacatgaataccatattgttcgcgttggatgtgcaacaatcataaaa
cgaatgatgaaatatctcattcaaagtgacaccgaacagttaagcaagcggcaggaaaaa
caaacaacgctcgacgactcaaccgattcaattgaatggcatcttttacataaattccga
aacatattaaccgcccaaaatgagtggacgcagaatttcattgaagaattcaactttaaa
ttaaccgagttggacgatttcagtgagattccatgcgaatgttcaattccatttatgttg
ctttggcattgtattttaaccatttgtgatgatgcatcgtctgaattacgttcgatttac
gcttcatatttggtggaagagaaattcgatcaaacatttttgcaaatgctgttccgtatg
atgcccgccgatgaagtgctacgaagtcaagagattaagacaaccggaagtgcatacttt
accgcagttacatggcaacaaattgccaatgatgaaattacatcggaacgttatgcatgc
tatttgtatacattggcattgaaatacttaccggcagtcgtacgacgttggtggaccaat
tcgcatccacgtcaaaaatcgctggttgataaaatcacaacggcatttgtatccacacaa
ttgtgtaacgatgaattccgtgcattgctcgataaaaatgaaaagcacgattcatttcaa
ataaccgtacactcgacaacacgtgaagtgcatgcaacatatgttattgacgaggcttgc
atggagttgatcatacaattaccagtaaattatccgcttggcgttgtgaaagtgaattgt
ggccaacaaattggcgataaacttcaatcacgtcaggttgttatgcaattgtccatcttt
ttgacacatcaaaatggttccatttggaatggtctgtcgttgtggaagaggaatcttgat
cgaaaattcgatggcgttgaagagtgctacgtgtgttacagtgttatacatcaagaaact
tgtcaattaccaaaacttacatgcaaaacatgcaaaaagaaattccatggtcaatgtttg
tacaaatggttcaacacaagcaataagtcaacttgccctatctgcaggaatatgttttaa
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integrated database retrieval system
