Contarinia nasturtii (swede midge): 116346997
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Entry
116346997 CDS
T08003
Name
(RefSeq) ribosomal RNA processing protein 1 homolog isoform X1
KO
K14849
ribosomal RNA-processing protein 1
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cns01009
]
116346997
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116346997
Protein phosphatases and associated proteins [BR:
cns01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116346997
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116346997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop52
Lock_Gag1-like
Motif
Other DBs
NCBI-GeneID:
116346997
NCBI-ProteinID:
XP_031633222
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MKPIDDSVEQMENLRVNLLTQEIKFAKMLAGNTFDGALKEKHIDKLAIWLKNRAACTEAF
TDKDCMRIWKGLFYSMWMSDKPIPQENLANKISALLHTFDRFEVSLQFFAAFLRTMANEW
NGIDQWRIDKFLMLVRKVTRELLRSVQNNKWNDESIEKLNETLKKTVLGSEFHVPRGLFM
HLTELYFEEVAKVSAGELATEVITKLLKPFMFYVASQSDYKLIQFVVRSVFNHLLFQSES
GREYKEKFDAWKSMNFPGKTINDLVREELDENGEDENGVEENGEEDGDDDIDEQIQETGA
LDPRAGRVDVVMHEIKFDPLEIVGHLEELKYKKFTRVRNRKCIDRIVTTYRKFAGGVFPI
GIQKLKVNRDELELPDVDEKAEELAEFENELYGKQRELKQLNKRKRKKIVSDADLFNEFQ
LKSNKVAKIKHEANVWKEEDMSVENSVCTPAKKAKKAKKAKKNELKESNDNIAETPKKLK
KHKISDWEKPLENGEVEYFIPSKKQQLNGVPRVTKTVDTTTAHVITPAGNDKSKVNGTEE
NVTPKKSSHLKVKKSKPNNETTPIVANVISTEMTPESIKSPKTLKSTEKKVKSTSKLAQS
KTSTPNIFVDKAAGTPSSEKRVKIALKMNKSQEVIEYIRQLKQSPYPYDSAKKPSKGVLK
PNLAPSPINPFYKRLIGLE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgatcgatgatagtgttgaacaaatggagaatctccgtgttaatttactgacg
caggagataaaatttgccaaaatgttggcaggcaatacgttcgatggtgctctcaaggaa
aaacacattgataaattggccatttggctgaaaaaccgagcagcctgtacagaagcgttt
accgataaagactgtatgcgaatttggaagggattgttttacagcatgtggatgtcggac
aaaccaataccacaagaaaatttggcaaacaaaatctccgcattactacataccttcgat
cgatttgaagtaagccttcagttctttgccgcgtttttaagaaccatggcaaatgaatgg
aatggcatcgatcaatggcgtatcgataagttcttgatgttggtacgtaaagtaacgcgt
gaattattgcgcagcgtacaaaataataaatggaacgatgaatcgatcgaaaaattgaat
gaaactcttaagaaaacggtgctcggttcagaatttcatgtgccaagaggtttattcatg
catttaactgaactttacttcgaggaagtagccaaggtttcagcgggcgaattggcaacc
gaagtgataacaaaacttttgaaaccattcatgttctacgttgcatcacagagtgattac
aaactcattcagtttgtggttcgttcggttttcaatcatcttctgtttcaaagtgaaagt
ggtcgcgaatacaaagaaaaattcgatgcatggaaatcgatgaatttcccgggaaaaacg
atcaacgatttggttcgtgaggaattggacgaaaatggcgaagacgaaaatggtgtagag
gaaaatggcgaagaagacggtgatgacgatatcgatgaacaaatccaagaaaccggtgca
ctagatcctcgagctggccgagtcgatgttgtaatgcatgagatcaaatttgatccgctt
gaaattgttggccaccttgaagagttaaaatacaaaaaattcacgcgtgtacgaaatcgt
aaatgcatcgatcgcattgtaacaacgtaccgaaaattcgctggcggtgtatttccaatc
ggtattcaaaaattaaaagtcaacagagatgagttggagcttccagatgttgatgaaaag
gccgaagaactagctgaatttgaaaatgaattatacggcaaacaacgtgaattgaaacaa
ttgaataagcgaaaacgaaagaagatcgtttcggatgcggatttattcaatgaatttcaa
ttaaaatcgaataaagtggcgaaaattaagcacgaggccaatgtatggaaagaagaagat
atgagtgttgagaattcggtatgtacaccggcaaagaaagcgaaaaaagcgaaaaaagcg
aaaaagaatgaattgaaagaatccaatgacaatatcgctgagacgccaaaaaaattaaaa
aaacataagatttcagactgggaaaagccattggagaacggtgaagtggaatatttcatt
ccatcgaaaaaacaacaattgaatggtgttccacgagtgacaaaaactgttgacacgact
acagcacatgtaatcacaccagccggtaatgataaatcgaaagttaatggcaccgaagaa
aatgtaacgccgaaaaaatcatcgcatttaaaagtgaaaaaatcaaaaccaaacaatgaa
acaacaccaattgtcgccaatgttatttcaaccgaaatgacaccggaatcaatcaaatca
ccgaaaacattgaaatcaacggaaaaaaaggtaaaatccacttcgaagttagcacaatca
aaaacctcgactccaaatatttttgtagacaaagccgccggcacgccatcatccgaaaaa
agggtcaaaatcgcattaaaaatgaataaatcacaagaggttatcgaatacatacgacaa
cttaaacaatcgccgtatccatatgattcggctaaaaaaccttcgaaaggtgttttaaaa
ccgaacttagcgccaagcccaattaatccattttataaacgattaattggcttagaatag
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