Contarinia nasturtii (swede midge): 116347034
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Entry
116347034 CDS
T08003
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116347034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cns04121
]
116347034
Enzymes [BR:
cns01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116347034
Ubiquitin system [BR:
cns04121
]
Ubiquitin ligases (E3)
HECT type E3
116347034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
116347034
NCBI-ProteinID:
XP_031633288
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MFNTSESQKNDFLDKTKAAREERETKKKRDGAIIKIQSWIRVWLARINYEQRALAALDDI
LPPNTKMPEMVLKANVDVYYAVNRFLKISRENSDAYSERLQQVCRYLSKSLDSENSNLSY
IGIALNNDLDKAWTQHIELLLYKCCVQMENLRPDTHSESLTLALYLSTLISFTTPKNWGL
LKENSLMEQIPVMKQKCSNMLGTLVEKGFFQTLRKILLKGTCRKNITLKPLSFQAVLELS
IRPLTTGNFTEDLMAKFLIFILSTPALIYQIEANITNSLKTFQTESILKRSLDLLEKEQN
MKYVTSDMKATQCLALLANIVHLFHLEPIETATKFGFPTFTLVCMKLLQTISDLAKDPKQ
GSKGLLEYHELLGWTPVSSEHNENVSLIKKQLYLLWGYRTVKIILGDNLKELSVGYEKIE
FTLPQQGSGNLLKRALERTQSKSTQNKASKPWRKLGSHEISRVAIVCTMYHEALETLTQL
KLDILSGLCYHNTLLHDLFILIASLGLNCGLKPFLELLSASSNTLPPPLLMLLLFCDLMT
HYVTILDDIEMYEQQTPFELIHYIALSSFLNNFLYKAIQENIFDLKVINSTPLFVSMHSL
LLCLYRRDCRRQFAPKNHWLIYDIRPSNFLADLEKGKKHTQVLLSKMPHIIPHEDRVKLF
RKYVHNEKAVLGLTESACASPSSALITIHRDRIVEDGYRQLAMLPPAALKGVIRVRFINQ
QGLDEAGIDQDGVFKEFLEETIKKVFDPSLNLFKTTSDQRLYPSPTSHLQDNHLQLFDFV
GRMLGKAVYEGIVVDVPFAMFFLSQLLQQQALYSCIDELPSLDQELYRSLSFVKHYQGDV
SDLDLTFSVDEDQMGRIVTHELYSGGRARPVTNDNKINYIHYMAFFRMHTQIKEQTIAFI
HGFKTIVNLDWLSLFSTPELQRLISGDTAPLDLKDLRKHTQYYGGFHDSHRVVGWLWDIL
ARDFTEDERKLFLKFVTSCSKPPLLGFTHLEPPFSIRCVEVGDDEDTGDTIGSVIRGFFT
IRKKDPLNRLPTSSTCFNLLKLPNYQKKSTLRDKLRYAISSNTGFELS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatacaagtgaatcgcagaaaaatgactttttggataagacaaaggctgcacgc
gaagaacgagaaacgaaaaagaaacgggacggtgcaataatcaaaatacaatcatggatt
cgtgtatggttagcacgcattaattatgaacaaagagcactggctgcgctagacgatatt
ttaccaccaaatacaaaaatgcccgaaatggtgttgaaagcaaatgtcgacgtgtattat
gcagttaatcggtttttgaaaatatctcgtgaaaattcggacgcgtatagtgaacgcttg
caacaggtttgtcgctatttgtcgaaatcacttgattcggaaaattcaaatcttagctac
attggtattgctctaaataacgatctcgacaaggcatggacgcagcacatagaattattg
ctatacaaatgttgtgttcaaatggaaaatctacggcccgatacacactcagagagtttg
actttggcgttatatttaagtacattgatttcattcacaacgccaaaaaattggggtcta
ttgaaagaaaatagtttaatggaacaaataccagtaatgaaacaaaaatgcagcaatatg
ctcggtacactcgtagaaaagggattctttcaaacgttacggaaaatacttttaaaagga
acttgtcgaaaaaatatcacattgaagccgctctcatttcaagccgttttagaattgtca
attcgaccattaacaaccggaaattttaccgaagatttaatggcgaagtttttgatattc
atcttatcaacgcctgccctaatttatcaaattgaagcaaatataaccaattcattgaaa
actttccaaacagaatcaattctgaagcgaagccttgatttactggaaaaggaacaaaat
atgaaatatgtaacaagcgatatgaaagcaacacaatgtttagctttattggcaaatatt
gtccatttattccatttggagcccattgaaacagcaacaaaattcgggtttcctacgttt
acgcttgtctgtatgaaactgttgcaaactatttcagatttagcgaaggaccctaaacaa
ggttcaaaaggtctacttgaatatcatgaactattgggatggactccagttagttcggaa
cacaatgaaaatgtgtcacttatcaaaaaacaactatatttgttatggggatatcgaaca
gtcaaaattattttgggtgataatttaaaagagttatcagtaggctatgaaaaaatcgaa
ttcacattgccgcaacaaggatctggaaatttattaaaacgggcactggaacgaacacaa
tcgaaatcaacgcaaaataaagctagcaaaccatggcgtaaacttggatcacatgaaata
tcaagagtggccatcgtttgtaccatgtaccatgaggcattggaaacactaacacaacta
aaattagatatattgtccggcctctgttaccacaacacacttttacatgatcttttcata
ttgattgcatcgcttggtctgaattgtggcttaaaaccatttttagaactattatctgcc
tcatcgaatactttaccacctccacttttgatgttattactgttttgtgatttaatgacg
cattatgtgacaattttagacgatattgaaatgtatgagcaacaaacaccgttcgaactg
attcattatatcgctttatcaagttttctgaacaactttttgtataaagcaattcaggaa
aatatattcgatttaaaagtaatcaattcaactccgctatttgtgtcaatgcattcatta
ttattatgtttgtatcggcgtgattgtcgtcgtcagtttgcgccaaaaaatcattggctt
atttatgatattcgaccatcgaattttcttgccgatttggaaaaaggtaaaaagcataca
caagtgcttttatcaaaaatgccacacattataccacacgaagatcgtgttaaattattt
cgaaaatatgtgcacaatgaaaaagcggtactcggtttaacggagtcagcatgtgcatca
cccagttcggcattgataacaatacatcgtgatcgaatcgttgaggatggttatcgacaa
ttggcaatgttaccaccggctgcattgaaaggtgtgattcgtgttcgtttcataaatcag
caaggtcttgatgaggctggtatcgatcaggatggtgtttttaaagaatttttagaagaa
accattaaaaaagtatttgatccatcactaaatttattcaaaacaacaagtgatcaacga
ctgtatccatcgccaacgtcacatttgcaagataatcatttacagttatttgatttcgtt
ggacgcatgctgggcaaagccgtttacgaaggaattgtcgttgatgtaccgtttgctatg
tttttcttatcacaattactgcaacaacaagccctatacagttgtatagatgaactacca
agtttagaccaagaactatatcgcagtctaagttttgttaaacattatcagggtgatgtg
tctgatttggatctcactttttcggtggatgaagatcaaatggggagaattgttacacat
gaactatattctggtggaagagctcgaccggtgacaaatgataataaaatcaattatatc
cattatatggcgttttttcgaatgcacacccaaattaaagagcaaacaatagcatttatc
cacggctttaagaccattgtcaatttggactggttatcattgttttcaactccagagttg
caacgtctgatatcgggcgacacggcaccattggatctaaaagatttgcgaaagcataca
caatattatggtggattccatgattcgcatcgagttgttggctggctttgggatattcta
gctagagactttaccgaagatgaacgaaaattatttctcaagtttgttacaagctgttca
aagccaccattgcttggttttacacatttggagccgccattttcgattcgttgtgtcgaa
gttggtgacgatgaagacactggtgatacaatcggttcggtgatccgtggatttttcaca
attcgaaagaaagatccattgaatcgtttgcctacatcttcaacatgctttaatttacta
aaattgccaaattatcaaaagaaaagtactctgcgcgacaagctgaggtacgccatttca
agtaacaccggatttgaactatcttga
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