Contarinia nasturtii (swede midge): 116347075
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Entry
116347075 CDS
T08003
Name
(RefSeq) homeobox protein Nkx-2.1 isoform X1
KO
K09342
homeobox protein Nkx-2.1
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cns03000
]
116347075
Transcription factors [BR:
cns03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
116347075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
SWI-SNF_Ssr4_C
FAM163
Motif
Other DBs
NCBI-GeneID:
116347075
NCBI-ProteinID:
XP_031633341
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MSTILAINSGTFTEDPQEHNLLQDLNGVDFVMSLSPKSSNSHNLASLQHLQSLQQQNSLH
NHSTPFSVTDILSPIEESYRKLELSSTNPPSPYRFVHFESNSSGSSVNSPSALGNSSSMA
NPYAMTPLYHSPGVQSYCGPSDNLSLAGHYTDMRSSAAGWYGSTANDPRFAISRLMGGSA
SGSMGHMSNMGGLAACSVSDTKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPE
REHLASVIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQSASSPRRVAVPVLVKDG
KPCSNNSNNSSQPTQAQNQHAQQQQQQQQQQQQQQQQLNSNTTPSNNNNVIVVGDVSNTH
SPDTSSTLLSSYNGVQHSQMLQQPCNNSLMSSSLAMAYRNQNNFMGNSHQQQCGSYIPMQ
GRAW
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactatactggcaatcaattctggaacctttacggaggatcctcaggagcataat
cttcttcaagatttaaatggcgttgatttcgttatgagcttatcgccaaaatcatcgaac
agtcataatttagctagtttacaacacttacaaagtctacagcaacaaaactcattgcat
aaccattcgacgccattcagcgtcaccgacatactcagtccaattgaagaatcataccgc
aaattggaattaagtagcacgaatccgccgtcgccttacaggttcgttcattttgaatca
aattcaagtggtagtagtgtaaattcgccaagtgctttaggaaacagttccagtatggca
aatccatatgcaatgactccactttatcacagtccgggtgttcaaagctactgtggacca
tccgataatttatcgttagccggtcattatacagatatgcgcagttcggcggctggatgg
tatggatcgacagcaaacgatccacgatttgcaatatcgcgattgatgggaggctcagca
agcggatctatgggtcatatgagtaatatgggtggtttggctgcttgtagcgtctctgat
acaaaaccaatgcagttccccttggcacaaagacgaaaaaggcgtgtactatttactcaa
gctcaggtttatgaattagagagacgtttcaaacagcaaaagtacctttcagcaccggaa
cgtgagcatttggcgagcgtcatccatctaacaccaacacaggtgaaaatttggtttcaa
aatcatcgatacaaatgcaaacgtcaggccaaagagaaagcgatggctgagcaaaaccaa
cataatcagtcagccagttcacctcgacgtgttgccgtacccgtattagttaaggatggt
aaaccatgctcgaataattcgaacaatagtagccaaccaacgcaggcacaaaatcaacat
gcacaacagcaacaacagcaacagcaacaacaacaacaacaacaacaacaattgaacagt
aataccacaccgtcaaacaataataatgttatcgttgttggcgatgtatccaatacacat
tcaccagatacatcatcgacattattgtccagctataatggtgtacagcattcgcaaatg
ttacagcaaccttgcaacaattcattgatgtcgagcagcttagcgatggcatatcgaaat
caaaacaatttcatgggaaacagccatcaacaacaatgcggcagctacatacccatgcaa
ggacgagcttggtaa
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