Contarinia nasturtii (swede midge): 116347123
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Entry
116347123 CDS
T08003
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cns04040
]
116347123
Ion channels [BR:
cns04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116347123
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA_2
VWA_3
dCache_1
VWA
DUF444
VWA_CoxE
FtsL_2
Motif
Other DBs
NCBI-GeneID:
116347123
NCBI-ProteinID:
XP_031633432
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MLRFFYGNMLTRDQFNAMHLWRFIIFVLIILSILVGLTWETEPPKTSEPKPIKHNVVKAW
ADKLGVELWHLGNFITRKKEVQESFKNAQVVPRDGKKILETMATELESMIKSKTSAVQRI
VDAAENAAQSHDEEGCDEKFFYYDAKEMLAPGDTTTTAAPKKFDDRSLEPPNVTIARIVL
SPNRNFYNTPVNLSLSSVHVPTNVYGRACDVIKDIQWSQQLDSIFKDNYQKDPTLSFQFF
GGSNGFMRQFPASQWKLEPVDLYDCRLRPWYIEAAASPKDMVILVDISGSMRGQRKDIAK
HVVSNILETLTTNDFVNILKFSERPESVVKCFNDTLVPATLDNIRSLNAGMENIETEKIA
NYKIALENAFETLKAFRENDEGAGCNQAIMLISDGVPNDFNETFKLYNWPNETYRHVRLF
TYLIGSEVPDFQLIKEMACINQGYYVHLSVPSEVREQVLRYIPVMARPLVLGRHEHPVIW
SHVYADIIDPKMTDYNWEIMQRQTQKDLFLKFQSGENRTFERRDERDRLRLEPSDEDNNF
EYNMLTTVSMPVYDRRERANITEEILINEAHWISITRETAIANLLGVAGTDVPIRDIKKL
MMPFTLGVNGYAFIVNNNGYVLTHPDLRPSFKGILKPAYNTIDMLEVELMDDNREPRDFS
DQLLKVRDKIINQLNGSINLMVKYHMDNLKRVSRLKRWYYWTAIPNSPFTLVVTYPEPYG
SNRIQIRNEDEIHRIQLKGDVLSFFTGNRWRVHPDWLYCKHAEMSLDMTPEEELKYFLNR
TKNTRWKWKGRTIVSPEHAVHSNTSTGRTTTINDKDAYSCDRSLMQEVVADAKVTEWFSR
NVSFSSKDGPSPIAVLIGLLPRNEFDQRFGITTSFLATHSGLVRWMDFQKPNNNYVADSQ
PDDPTADILRSVDEVWYKRAVEHHYIDREGFVYSVPYHKEKDMDVNNILVTASHAIFHTE
DKKSAPIAVVGYKFQHSALRALFKNITSNCGENCARTCFSNSREPDVQCFVLDNHGYVVI
TNDPVHTGKFFGDVDGRLMQNLVAENIYEGVNITDYQGVCTQDVPEGSPANILQTPFLYI
FKLLKWTIKWIAWVLIQNSLLPASANDMSDYDAYLSQSTATPFPMDDKIKNLNRSIIKRT
RLFSCDKTIKLYTLSPTLKNRSNPRAQSCETQPFVVMPIPYSNLILLIKDLSCPIVDNTD
FKMSLIDEQYIHVYRNTCDSKEQCLTCYKATIKLNRRRPTSCISQNKNESEIQQCGHGNT
ISISLILLVLAMFIGQIL
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgttacgttttttctatggcaatatgttaaccagagatcagttcaacgccatgcattta
tggcgattcattatttttgttttgatcatattatccattttggttggattgacatgggaa
acggagccaccaaagaccagtgaaccaaaacccatcaaacacaatgttgttaaagcatgg
gctgataaattgggtgttgaattatggcatttgggcaattttataacacgaaaaaaagaa
gtacaagaaagcttcaaaaatgctcaagttgtgccaagagatggaaaaaagattctggaa
acgatggccactgagctagagtccatgattaagtcgaagaccagcgcggtccagcgtatt
gtggatgctgctgaaaatgccgctcaatcacatgacgaagaagggtgtgacgaaaagttt
ttctattacgatgcaaaggaaatgctggcaccgggtgatacaacaacaaccgccgcacca
aaaaagttcgacgacagatcccttgagccacctaacgtaaccatagcacgtatcgtgcta
tcaccgaatcgaaatttttataatactcccgtcaatctttcgttaagctccgtacatgta
cctacgaatgtgtacggaagagcttgtgatgttataaaggacattcaatggtcccaacaa
ttagatagtatattcaaagataattatcaaaaggatccaacattatcattccaatttttt
ggtggatcgaatggatttatgcgacaatttccagcgtctcaatggaaattggaaccagta
gatttatatgactgccgtttgcgcccgtggtatatagaagcggcggccagtccaaaagat
atggttattctagtcgatatatcaggttcaatgcgtggtcagcgtaaagatatcgccaaa
catgtagtttcaaatatattggaaaccctaaccacaaatgattttgtcaatatattaaaa
ttttcggagcgacctgagtcggttgtaaaatgctttaatgatacattagtgccggcaaca
ttagataatatacgaagtttaaatgccggcatggaaaacattgaaactgaaaagattgca
aattataaaattgcgttagaaaatgcctttgaaacattaaaagcttttcgagaaaatgat
gagggtgccggttgtaatcaggccattatgttaatatcggacggtgtaccgaacgatttt
aacgaaacatttaaattgtacaattggccaaatgaaacatatcgacatgttcgattgttt
acgtatttaattggtagcgaggtgcccgattttcaattgattaaagagatggcatgcatc
aatcaaggttattatgtgcatttaagcgttccatccgaagtgcgcgaacaagtcttacgt
tatataccagtaatggcacgaccgctcgtacttggccgacacgaacatcccgtcatttgg
tcacatgtgtatgctgatattattgatccaaaaatgaccgactataattgggaaattatg
caacgacaaacgcaaaaggatctatttttaaaatttcaatcaggcgaaaatagaacattt
gagagaagagatgaacgcgataggctacgccttgagccaagtgacgaggataataatttt
gaatataatatgctgactactgtttcaatgccagtgtatgatcggcgagaaagagcgaat
atcaccgaagaaattcttataaatgaggctcattggatatcaattacacgtgagacggca
atcgcaaatttattgggtgtagctggaacagatgtcccgattcgtgatatcaaaaagttg
atgatgccctttacgttgggcgttaatggttacgcgttcatagtaaataacaatggctat
gttttgacccatccagatttaagaccaagctttaaaggtattttaaagccagcatacaat
acaattgatatgctcgaagttgaacttatggatgataatcgtgaaccacgggatttctct
gatcaattgttaaaggttcgcgataaaattataaatcagttgaatgggagcatcaacttg
atggtgaaatatcacatggataatttgaaacgtgtgtcccgattaaagcgatggtattac
tggacggcgataccgaattcgccattcactctagtagtaacataccctgaaccgtatggt
tcgaatcgcatacagattcgaaatgaagatgaaattcatcggattcaattaaagggtgat
gttcttagcttttttacgggaaaccgatggagagtgcatcctgactggctatattgcaaa
catgctgaaatgagtttggacatgactcccgaggaagagctcaaatacttcctaaatcga
acgaaaaatacgcggtggaaatggaaaggacgaactatagtgtcgcccgaacatgctgtc
cattcaaacacaagtactgggcgaacaacgaccattaatgataaggatgcctattcttgc
gatcgaagtttgatgcaagaagtggttgccgacgcaaaagttaccgaatggttctcgaga
aatgtgagcttcagttcaaaagatggccctagcccaatagccgttttaattggcttactg
ccaaggaatgaatttgatcaacgattcggcataacgacttcgttcttggcaacgcacagt
ggcttagttcgttggatggactttcaaaaaccgaacaataactatgtggccgattcacaa
ccggatgacccaactgcagacattttacgatcagttgatgaagtatggtataaacgggcc
gttgaacatcattacatcgatcgggaaggtttcgtttattcggtgccatatcataaagag
aaagacatggatgttaacaatattctagttacggcgagccatgccatttttcacactgaa
gacaaaaaatctgctccaattgctgttgttggctataaattccaacactcagcactacga
gcactattcaaaaacatcacaagcaattgtggcgaaaattgtgcaagaacatgcttctca
aattcgcgagaaccagatgttcaatgcttcgtattagacaatcatggatatgttgtcatt
acaaatgatccagtgcatacgggtaaattttttggcgatgtcgatggaaggctcatgcaa
aatttagttgcggaaaacatctacgaaggagttaacataaccgactatcaaggtgtttgc
acacaagatgtacccgaaggaagtccagccaatatattacaaacgccatttttatatatc
ttcaaattactcaaatggacgatcaaatggattgcatgggtccttatacagaattctcta
ttaccggccagtgcaaacgacatgtcggactatgatgcgtatctgtctcaatcaacagcg
acaccatttccaatggatgacaaaatcaaaaatttgaatagatccataataaaacgcaca
aggctattttcgtgtgataaaacgataaaattatacacattatcaccgacattaaaaaat
agatcgaatcctcgtgcccaatcgtgcgaaacacaaccatttgttgtgatgccgatacca
tatagtaatttaatattgttaattaaagacttgagctgtcccatagtcgataacacggat
ttcaaaatgtcacttatagatgaacaatatatacacgtctatagaaacacgtgcgattca
aaggaacaatgtttaacatgttacaaagcaaccattaaacttaaccgccgacgaccaacc
agctgcattagtcagaataaaaatgaatcggaaattcaacagtgtggacacgggaacaca
atatcaatcagcttgattcttctagtcttagcaatgttcatcggtcaaattctttaa
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