Contarinia nasturtii (swede midge): 116347148 Help Entry 116347148         CDS       T08003                                  Name (RefSeq) THO complex subunit 3   KO K12880   THO complex subunit 3 Organism cns  Contarinia nasturtii (swede midge) Pathway cns03013   Nucleocytoplasmic transport cns03040   Spliceosome Brite KEGG Orthology (KO) [BR:cns00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     116347148   09122 Translation    03013 Nucleocytoplasmic transport     116347148  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cns03019]     116347148    03041 Spliceosome [BR:cns03041]     116347148 Messenger RNA biogenesis [BR:cns03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      116347148 Spliceosome [BR:cns03041]  Complex C   Other components    EJC/TREX     116347148  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     116347148 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st WD40 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I ANAPC4_WD40 Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st eIF2A WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_EML Tricorn_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR35_TULP_N RMC1_N Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C NBCH_WD40 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_SCAP PD40 Peptidase_S9_N Beta-prop_DCAF12 Cytochrom_D1 Beta-prop_ELP1_1st DPPIV_N Beta-prop_Nup120_160 Motif Other DBs NCBI-GeneID:  116347148 NCBI-ProteinID:  XP_031633484 LinkDB All DBs Position Unknown AA seq 322 aa AA seqDB search MKISKNSRVEQLQDYFKGHNKCKEQKAHASKVHSVGWNCDGRRLASGSFDKSVAIFALDR DRLAKDNTYRGHTGSVDQLCWHATLPDLLSTASGDKTVRIWDVRAGKCSTTINTKGENIN ITWSPDGHTIAVGNKEDLVTFIDTRTHKIRAEEQFNFEVNEIAWNNTSDLFFLTNGQGCI HVLSYPDLELQHMLKAHPGTCICIEFDPTGKYFATGSADALVSLWDANELACLRIFSRLD WPVRTISFSHDGRLLASASEDLLIDIGDTETGEKVADISVDAATFTVAWHPKQYLLAYAC DDKDNNDRRRDAGNLRVWGFSD NT seq 969 nt NT seq  +upstreamnt  +downstreamnt atgaaaatcagtaaaaattcgcgcgttgaacaactgcaagactatttcaaaggtcataat aaatgcaaagagcaaaaagcacacgcttcaaaggttcattcggttggatggaattgtgat ggaagacgcttggcttctggctcgtttgacaaatcggtggcaatattcgcattggatcgt gatcgtttggccaaagataatacgtacagagggcacactggttcagtagatcagttgtgt tggcacgcaacactgccggacctcttgagtacggccagtggtgataaaacagtacgcata tgggatgttcgagccggaaaatgttccacaacaattaatacaaaaggtgaaaatattaat atcacatggtcaccagatggacacacaattgctgttggcaataaagaagatttagttaca ttcatcgatacacgaacgcataaaatccgtgccgaagaacaattcaattttgaggtgaac gaaatcgcatggaacaacaccagcgatttattctttttaaccaatggccaaggatgcatc catgttctcagctatcccgatttggaattacaacacatgctgaaggcacatcctggtaca tgcatttgcatcgaatttgatccaactggcaaatactttgcaaccggttcggcggatgca ttggtctcgttatgggatgcaaatgaactggcttgcctgcgcattttctcacgattggat tggcctgtgcgtaccatttcattcagtcatgatggccgactgttggcatcggcaagtgag gatctacttattgacattggcgacaccgaaacgggtgaaaaagtggccgacatttcagtt gatgcagccacattcaccgttgcatggcatccaaagcaatatctattggcctatgcatgc gacgacaaagacaacaacgatcgcagaagagacgctggcaatttacgtgtatggggcttt tccgactga

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