Contarinia nasturtii (swede midge): 116347162
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Entry
116347162 CDS
T08003
Name
(RefSeq) uncharacterized protein LOC116347162
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns00040
Pentose and glucuronate interconversions
cns01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116347162
Enzymes [BR:
cns01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116347162
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
116347162
NCBI-ProteinID:
XP_031633509
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All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MKALVSLSLIALASSAYPMSKTNGMVGFAKAGGTTGGSRGSVVQINTLTDLYKNIGGSAP
KVLVINKDIKAPKITKVYMGSNKSIIGSFGQRTLFNIHLRASPSTQNVIFQNLIFKHSAQ
FQGNDDIQLYLNFGKNYWIDHCTFDGHPYSDKSVPLDKLIYIGDKADYATISNCFFANHH
YGLLLGHPADDNNKQFNGFPHLTICHNRFENLKSRAPGLMRYGFFHVYNNYINHFQNGFS
VAQNAQVYSESNYFGAALTVSKHVLTDYSNGTCTFADPTLAASLLSVKSQKSKWFPRMYY
SYKATSDKEAVNFTTKNAGSQSKALVFGS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcattggtctccttgagtttgattgctctagcgtcttcggcctacccaatgagt
aaaacgaatggtatggttggttttgcaaaagcgggtggtactaccggcggttcgaggggc
agcgtcgtacagatcaatacattgacggatctttacaaaaacattggtggcagcgcccca
aaagtgttggtcatcaacaaagatatcaaagcacccaaaataaccaaagtttatatggga
tcaaataaatctattattggctcattcggacagcgtacactgtttaatatccatttgcga
gcttcaccttcaacacaaaatgttatttttcaaaatttaattttcaaacattcggcacaa
ttccaaggtaatgatgacatccagttatatctgaactttggcaaaaattattggatcgat
cattgcacatttgatgggcatccgtattccgacaaaagtgttccactcgataagctcata
tatattggtgataaggctgattatgccaccataagcaattgttttttcgccaaccatcac
tacggactgttgctgggacatccagccgatgataataataaacaatttaatggttttcct
catttaactatttgtcataatcgattcgaaaacttgaagagtagagctcctggtctgatg
cgttatggtttctttcacgtatacaataattatatcaatcatttccaaaatgggttctcg
gttgcgcagaatgcccaagtctattcggagagtaattattttggcgctgctctaactgtt
tccaaacatgtattgaccgattatagtaatggaacgtgtacatttgccgatcccaccttg
gctgcatcccttctttcggtaaaatcacaaaagagcaaatggtttccaaggatgtactat
agctacaaggcaacttcagataaagaagctgtaaactttacgacaaagaacgcagggtct
caatctaaggcacttgtattcggtagttga
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