Contarinia nasturtii (swede midge): 116347362
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Entry
116347362 CDS
T08003
Name
(RefSeq) ATP-binding cassette sub-family A member 2
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116347362
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cns02000
]
116347362
Transporters [BR:
cns02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116347362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
SMC_N
R1_ABCA1
DUF4162
AAA_30
SRP54
RsgA_GTPase
MukB
AAA_23
CUB_CDCP1_4th
AAA_15
Motif
Other DBs
NCBI-GeneID:
116347362
NCBI-ProteinID:
XP_031633795
LinkDB
All DBs
Position
Unknown
AA seq
1628 aa
AA seq
DB search
MSNTFITTVQIFLWKHWKCFQCSWVKNIFMIIVPIAIAWFQIHVSSATVKGKEIIFDSIP
EDEIFRYFPANNDDLILYSPNTSWTFRIMENVRTRLDIIEQRVHPSDTEEELQSSFKRHK
NNRDFAVIFSQDGSNGLLNYTIRTRNNNFRTEQIFLNNIYTIGERGIDEYINSGFLALQR
SIDKAYIDLTAEQHHDEFKLEVKKLPLNARERNKFIGIKETGIFVVIIYSFTALLNMILV
PMVEEKGCGVKEFLRIASTDSYLNNMTFFFTNLLIGCIIFGATLIILACYQLLGHVASIW
LIILLFLYLTSAIAFTFLLTVAFDSVYYAKIGGFLCYIAPFLIVLFNEKMLDLILPVLNS
AVLLKGMTLIDIYGMKGLVFSFEYLLNRSNGYSMLELYGFLLAHTFGYILLYFYLSHVFP
GRCGTPKPFYFPLMPSYYCSSSKVTSSATGDNTDTVISVDTQAEIAVKIRGLTKIFKKFR
GRKNVAVNNLSLDILKNQITVLLGHNGAGKTTTMSMISGIIPKSGGTISIDGEENVDVYR
HKIGYCPQHNVYMSYFTCYDHLWFFGRLRGLTTKQVVYDANHLLKKLNLTSKAYEYGHNL
SGGMKRRLCLGIALIGNTKIAILDEPSSGLDPESRRELWNILLDMRKDHTIFITTHYMEE
AEALADKIAIISHGQLLCYGPSIQLKRRFETGYILKLLTSEPFKQVDTIELIQKFVPDMA
LKSFVKPTLLIALPYKFQSTFPELLSQLEQKQQELGISSISITNSSLEDVFLKSDSNYAS
RPKEGQDEVDGPPYNRLREEPLRVSGFEQFLAIWYKKGIFMRAQWLYWLMLSSFPIAAIA
ISFLSINYKLFNKGDTASELIDLHIDRITPSDAQILIWFDESLKDQTYFQQSLQKVIDGE
NLKSKYLTYPRELIETELLYLERANTTHYHEYFPAALVIYRDETTKGIGISVLFSGNSLH
SLAATLNLISNFELQLLTNGDNRIKTTNAPMHRNQTKISKSDLDVYAMFMPMAMFFYILF
YVSMPFNEERTEFKKMQPISPFIYWTSVFLFDAMIHALYAYFMCTIHIWCDVHHIFETKE
HVMFLSIYMLYGLSYLPIIYMVSQMFRTMSSLYSFLTYMFVIFYIIASFISSSEDNIKTY
NTLINVLLFVPDYALSHAISSLLISYVKQHEARINYNFDHQYSPTAKFIPETFSYTSIPG
PLDLTRYFYCTAAVIAATYLILINVVESIYRREKLRCFFTLRWRQKKRIDEQRSKSGDIQ
MNCCSSNSDSQVEEEKSLTRTLVREHKLKEYAVIVANLYKAYDDSNVVRGIDFAVKQGEC
FGLLGINGAGKTTTFKMLTHDTTVTHGNIYINGMSCFDQSTIYKTMFGYCPQVDALNSYM
TAYEILKYMAWIRGTPRHRINREVDKWLRRMDLVRYRHCQIKYYSGGTKRKLNTAIAMIA
VPQLILLDEPTTGVDPVSRRFMWNCIQDCQKSNKNIVLTSHSMDECEYLCNRLAIMVDGT
IRCIGPIQNLKNSFGLGFVIHIVYNERASIDNSENIIKVKESMSQMFIQCKLQEEYAGRL
TFIVKEKSLHWSEVFAKIQALQKQYKQFVTDITVNETSLEDIFLQFANTNQTSTTNQNNS
AHLEALSI
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacacatttataacgacggtgcagatttttttatggaaacactggaagtgcttt
caatgttcatgggttaaaaatatttttatgattattgtgccgattgcgattgcatggttt
caaattcatgtcagcagtgccactgtcaaaggcaaagaaatcatctttgattcaatccca
gaggatgaaattttccgatattttccggcgaacaatgacgacctgattttgtattcacca
aacacatcatggacatttcgtatcatggaaaatgtacggacgcgactggatatcatcgaa
caaagagtccacccgtctgacactgaagaagagctacagtcttcctttaagcggcacaaa
aataatcgagattttgctgtaattttctcacaagatggaagcaacggactacttaactac
accattcgaacgcgaaacaacaactttcgtaccgaacaaatattcttgaacaatatctat
acgattggtgaaagaggcattgacgagtacatcaacagtggatttttggcattacagcgc
agcattgataaggcgtatattgatttgacggctgaacagcatcacgatgaatttaagttg
gaggtcaaaaaactgcctttgaatgctcgtgagcgtaataaatttatcggaattaaggag
acaggaatctttgttgtgatcatatacagttttacagcgctgttgaatatgattttagtt
ccgatggtcgaagagaaaggatgtggtgtcaaggaatttctgcgaattgcatcgaccgac
agttatttaaataatatgacttttttctttacaaatctactgatcggttgtataatattc
ggagcaacattgataattttagcttgttatcagctactcggacatgttgcgtcaatctgg
cttattatcttactcttcttatatttgacatccgccattgcattcacatttctattaacc
gtcgcttttgattctgtttactatgcaaaaattggaggatttctctgctatattgcgcca
tttttgattgtattattcaatgagaaaatgttggacctgattttgcccgttttgaattca
gccgttctactcaagggcatgaccttgatcgatatttatggcatgaaaggcttggtcttt
tcgttcgaatacctgttgaatcgatcaaatggatattcgatgcttgaactgtatggattc
ctgttggcacatacatttggctacattctattgtatttctacttatcgcatgtgttccct
ggtagatgtggtacaccaaaaccgttttattttccattaatgccgtcttactactgtagt
agttcaaaagtaacttcatcggcgacgggtgataatacagataccgtgattagtgttgat
acccaagccgagatagcggttaaaattcgtggcttaacaaaaatattcaaaaaattccgt
ggtcgtaaaaatgtcgccgtaaataatttgtcattggatattttgaaaaatcaaatcact
gtcttgctgggtcataatggcgctgggaaaacgacaacaatgtcgatgatcagcggcatc
attccgaaatctggcggtacaattagcattgatggtgaagaaaatgttgatgtttatcga
cacaaaatcggatactgtccacagcataatgtttacatgagctacttcacatgctatgac
catttgtggttctttggacggctacgcggacttaccacaaaacaagttgtatacgatgcc
aatcacctgttgaagaagctcaatctgacttcaaaggcatatgagtacggacacaattta
tcgggcggaatgaaacggcgtctatgtttgggcattgcattgatcggaaatacaaaaatc
gccattttggatgagccatcgtctggtttggatccagagtcgcgtcgtgaattgtggaac
attttattggacatgcgaaaagatcatacgattttcataacgactcattacatggaagag
gctgaagcattggctgataagattgcaatcatatcacatggacagttgttatgctatggt
ccgtcgattcaattgaagcgtcgatttgaaacgggttacattttgaaattactaacaagc
gaaccgttcaaacaagtcgatacgattgaattaattcagaaatttgtgccggatatggca
ttgaagtcgtttgtcaaacccacattattgatcgcattaccatacaaattccaatcaaca
tttccggaactactatcgcaattggagcaaaaacaacaagaattgggcatttcatcgatt
agcatcacaaattcatcgttggaagacgtgttcttgaagagtgacagcaattatgccagc
cgaccaaaagagggacaagatgaagtcgatggaccaccgtacaaccgactgcgcgaagaa
ccactgcgagtcagtggattcgaacaatttttagccatttggtataaaaagggcattttt
atgcgcgcacagtggctgtattggttgatgttgtcatcattcccgatcgcggctatagcc
atcagtttcctgtcgatcaactataaactcttcaacaaaggtgacactgcatccgagctc
atcgatctgcacattgatcgcatcacaccaagtgatgctcaaattctaatctggtttgat
gaatccttaaaagatcaaacgtatttccagcaatcgctgcaaaaagtgattgacggtgaa
aatttgaaatcaaaatatctaacgtatcccagggaattaattgaaacagaactattgtac
ttggaacgtgcgaatacaacccattatcatgaatattttccggccgctttggttatctat
cgagacgagactaccaaaggtattggcattagtgtattattctcgggaaattcattgcac
agtttggcggcgacgctgaatcttatcagcaattttgaattgcaactacttaccaacggt
gacaatcgaattaaaacaacaaatgcaccaatgcatcgaaatcaaacaaaaatcagcaaa
tccgatttggacgtgtatgccatgttcatgccgatggcaatgttcttctacattttattc
tatgtttcgatgccattcaatgaagaacgcaccgaattcaagaagatgcagcccatttca
ccgttcatttattggacgtcagtatttttatttgatgcaatgattcatgcattatacgca
tattttatgtgcaccattcacatttggtgcgatgtacatcatatttttgaaacaaaggaa
cacgtgatgttcctgtctatttatatgctgtatggtctcagctatctaccgatcatttat
atggtcagccagatgttccgcaccatgtcgtcattgtactcgttcttaacatatatgttt
gtgattttctatataatcgcgtcgttcatttcatcatcggaggacaatataaaaacttac
aatacactgattaacgttttattatttgtacctgactacgctttatcgcacgccattagt
tccttgcttatttcttatgtgaagcaacatgaagctcgaattaactataattttgatcac
caatattcaccaaccgctaaatttattccggaaacattttcatacaccagcatacccgga
ccacttgatttaaccagatacttttactgcacagctgctgttattgctgctacttatttg
atattgatcaacgttgtggagagtatttatcgacgtgaaaaattgcgttgtttcttcact
ttaagatggcgacaaaagaagcgaatcgatgagcaacgctcaaaatcgggcgatattcaa
atgaactgttgctcatcgaacagtgattcgcaggtcgaagaggaaaagtcactgacgaga
actttagttcgtgaacataaactcaaagaatacgcagtcattgtggctaatttatacaaa
gcgtatgacgattcaaatgtggtacgcggcattgattttgccgttaaacaaggtgaatgc
tttgggttgctcggtatcaatggagctggcaaaacgacgacattcaaaatgttgacacat
gacacaacggtgacacacggcaatatttatatcaatggcatgagttgctttgatcaatca
actatttacaaaacgatgttcggctactgtccccaagtggatgcattgaattcatacatg
acagcttatgagatattgaagtatatggcttggatccgtggcaccccacggcatcgtatc
aaccgtgaagtggataaatggctgagacgaatggatttggtgcgatacagacactgtcaa
atcaaatactattccggtggaacgaaacgaaaactgaacactgccattgcaatgattgct
gttccgcagctgatattgctagacgaaccgacaactggagttgatccagtgagccgacga
ttcatgtggaattgcatacaagattgtcaaaagagtaataaaaatattgtgctaacttca
cacagtatggacgaatgtgaatacctttgcaatcgccttgcaatcatggtcgacggaaca
attcgatgcattggaccaattcaaaatctgaaaaattcatttggactgggtttcgtcatt
cacatcgtgtacaatgaacgtgcttcgatcgacaatagtgagaacataatcaaagtaaaa
gaatcgatgagtcaaatgtttatccaatgtaaattacaagaagaatatgcgggtcgttta
acattcatcgtaaaagagaagtcgttgcattggtccgaggtgtttgccaagatccaagcg
ttgcaaaagcagtacaagcaatttgtgacggatataacggtgaatgaaacatcattagaa
gacatatttctgcagtttgccaacaccaatcaaacgtcgacgacaaatcaaaataacagt
gcccatctagaggctctttcgatttaa
DBGET
integrated database retrieval system
