Contarinia nasturtii (swede midge): 116347631 Help Entry 116347631         CDS       T08003                                  Name (RefSeq) protein similar isoform X1   KO K08268   hypoxia-inducible factor 1 alpha Organism cns  Contarinia nasturtii (swede midge) Pathway cns04137   Mitophagy - animal cns04140   Autophagy - animal cns04148   Efferocytosis Brite KEGG Orthology (KO) [BR:cns00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     116347631    04137 Mitophagy - animal     116347631    04148 Efferocytosis     116347631  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cns03000]     116347631 Transcription factors [BR:cns03000]  Eukaryotic type   Basic helix-loop-helix (bHLH)    Factors with PAS domain     116347631 SSDB OrthologParalogGFIT Motif Pfam:  PAS_3 bHLH_HIF1A PAS_11 PAS PAS_9 PAS_4 HIF-1 HLH Motif Other DBs NCBI-GeneID:  116347631 NCBI-ProteinID:  XP_031634170 LinkDB All DBs Position Unknown AA seq 1324 aa AA seqDB search MCFMDSKSQSSIGSELPNKMIEEKRAKPKEKRRNNEKRKEKSRDAARCRRSRETEIFTEL GETLPVRKDELENLDKSSVMRLAIATLKIEDMLQLFKFEDAAKQKVEDQLLNNIDENVVM KALDGFLIMLSTDGDVIYVSENIHEYIGIHQIEILGNPIWDYTHQCDHNELRDILKAHAE DHKKNSESSYRNVSIRIKCTLTSRGRSVNIKSATYKVINIEGHIVLDKAKNHHQFIGIAR LIPHPSNIEVPLDSKTFLSKHSLNMKFSYVDDKMLPILGYKPSDLLDKSLYEYHHSVDSE ALMVAFKNVINKGQTETQRYRFLGRNGGYCWCVTQATLVYDKQKPQSVVCVNYVISDLIN ENEVYSLRQLEAFNALSPSEKLELQTKAAERSAELKIAKIDPISPKQETFEARNIKLEVV DDYPLQNKTNINNNSNDQLNCAKPSDLIIVPETPIRRVLIANQLNNGAAAKSNPKAVTAS VFKAIPIGAKQPFKIIGGEQLNCNGNNGVARAPQAVTATLIQPITAVKRDSFGKIQSNIA KPSLVPRQTVVTASLFQPRNTTAGPKFSSATTVTQQASRAAETMNKSFCMLSDDLSQPTL LKAKPDDTALLGVQPPSPLSTASSSPSMTHNSINNCSGETTTTTVTTNKYATNNLNDITP LDDTTTPLFGEIFDELILPDGYCTLLSDDINPIDSQSNKMNIIDPFISYRDEMCETGDIS SPSILSPDNLSKSPAGSSSIPSLCSPNSMSHSDEFAFMSTSLDNTDIDLSMRAPYIPMNE NDDLPLLTEDLMWSAFSDELSLHKDIKEASALQQQQQQQQQQQTLHLQSTLPSQQFGPDT VEQMIIDGAISESVKGTPNASEQRLMFGTASNLASYLASKYVENDTGNDECNKQTIAHEI LKMEQHSPNYECGSNSNSTAIDDNSIKTQQMLAKSLNDDSIRSLTPNQIAGEPSKMEVID AITDGCITTYTIQMFDSDAFTKNGTNPTTLSNWTMNDLLQMNVNETKTSVASPAKRGSLR SRTQNQQQSMTETASNISQLSHKRPSPLDSSINKRLKSNSTVSTFNQTNSNRSTIQQPSL SLQNQETVQQQQQKSPHLLQHLMAPSPDRLRKYTGPANKQTANDKIDTQWKCNVGYDEPK AQSSDSVLKNLLCTMASQPEVPISTIDLLKENRKLDLGQSNFEYGPKVNDTNGMDSDEYG LVDDIFLVNELNRSFPNSNGDTSPFTSSDDDLVGLMKSSIDEKKPFESFEKQITITVPQP PPLSSDSLMVGGCLFDGITDQTNILPASLISPMGTENSSYDFNMFDRTDMGADSLLDVWA DEMK NT seq 3975 nt NT seq  +upstreamnt  +downstreamnt atgtgcttcatggacagtaaatcacagtcatcgataggcagtgaattgccaaacaaaatg atcgaggaaaaacgggccaaaccgaaagaaaaacgaaggaacaacgagaagcgcaaggag aagtctcgtgatgcggccagatgtcgtcggtctcgcgaaacggaaattttcacggagctt ggtgaaacgttgccggtacgaaaagatgaattggaaaatcttgataaatcatccgtgatg cgtttggcaattgctacattgaaaatcgaagacatgctgcaattatttaaatttgaggat gcagcaaaacaaaaggttgaagatcaactactcaacaacattgacgaaaatgttgtaatg aaagctcttgacggcttcttgattatgctctcgaccgatggtgatgttatatatgtatca gagaatattcacgaatatattggcattcatcagattgagatccttggaaacccaatttgg gattacactcatcaatgcgatcacaatgaattgcgcgatattttgaaagcgcatgcagag gaccacaagaaaaattccgaatcatcttatcgcaatgtttcgattcgtatcaagtgcacg ttgacgagccgtggtcgcagcgttaacataaagagtgcaacctacaaggtcattaacatt gagggtcatattgtattggataaagcaaaaaatcatcaccaattcattggaattgcccgt ttaataccacatccatcgaacattgaggtgccattggattcgaaaacatttctatcgaaa cattcattaaatatgaaattctcatacgtcgatgacaaaatgctgccaattttgggatat aaaccatctgatttattggataaatcattgtacgagtaccatcacagcgtcgattccgaa gcactaatggttgcatttaaaaatgtcataaacaaaggtcaaacggaaactcaacgctat cgtttcttgggacgtaacggaggatattgctggtgtgtcacacaagcaacgctcgtttat gataaacagaagccacagagtgtcgtttgcgttaattatgtcataagtgatttgataaat gaaaatgaagtgtattcattgcgccagttggaagcgttcaatgcgttatcgcccagcgag aaattagaattgcaaacaaaagctgcggaacgcagtgctgaattgaaaatcgcaaaaatc gatccaatttcaccgaaacaagagacatttgaagcgagaaacattaaattggaagtggtt gatgattatccattacaaaacaaaaccaatatcaacaacaacagcaacgaccaattgaac tgtgctaaaccatcagatttgattattgtaccggaaacaccgattcgacgtgttttaatc gcaaatcaactaaacaacggtgcagcagcaaaatccaatccaaaagccgttacagcatcg gtatttaaggcaataccgattggtgcaaagcaaccgtttaaaattattggcggcgaacaa ttgaattgtaacggaaataacggcgttgcacgtgctccacaagccgtaaccgcaacatta atacagccaattacggctgtaaaacgtgactcgtttggaaaaattcaatcgaatattgca aaaccgtcattggtaccgcgccaaactgttgtcactgcatcattatttcaaccgcgcaac acaaccgctggacccaaattttcatcggccaccactgtcactcaacaagcatcacgtgct gctgaaactatgaataaatcgttttgtatgctctccgatgatttatctcagcctacttta ttgaaagcaaaaccagatgacacagctcttttgggtgtacaaccaccttcaccgctatca actgcatcatcgtcgccgtcaatgacacacaattcaatcaataattgctcaggagagacc acgaccaccaccgtcaccaccaacaaatatgccacaaacaacttaaatgacattactcca ctcgacgacacaacaactccgttattcggtgaaatattcgacgaactcattttgcccgac ggttattgcacattactttccgatgacataaatcccatcgattcacagtcaaataaaatg aatatcatcgatccgttcattagttatcgcgatgaaatgtgcgaaacaggcgacatttca tcaccgagcattttatcgcccgataatttatcaaagagccctgcaggaagcagcagtata ccatcattatgcagcccgaattcgatgagccacagcgatgaatttgcatttatgtcgaca agcttggataatactgatatcgatttgtcaatgcgtgcaccatatattccgatgaatgaa aatgacgatttgccattgctcaccgaagacttaatgtggagcgcattttccgatgaatta agtttgcacaaagatataaaagaagcgagtgcgcttcaacagcaacagcagcagcaacaa caacaacaaacactgcatttgcaatcaacgcttccatcacaacaatttgggcccgatacc gttgaacaaatgattattgacggtgcaatcagtgaaagtgttaaaggtacaccaaatgct agcgaacaacgtttaatgtttggcacggccagtaatttggcctcatatttggcaagcaaa tacgttgaaaatgacaccggcaatgatgaatgcaataaacaaacgattgctcatgaaatt ttaaaaatggaacaacattcaccgaattatgaatgcggttcaaatagcaatagcactgcc attgacgataattcgattaaaacgcaacaaatgcttgcgaaaagtttaaacgacgatagc atacgatctctgacaccaaaccagatcgctggcgaaccatcgaaaatggaagttattgat gccatcaccgacggctgtatcaccacatacaccatacaaatgtttgacagcgatgccttt acgaaaaatggcacaaatccaaccacattgtcgaattggacaatgaacgatttgcttcaa atgaatgtcaacgaaacaaaaacatcggttgcatcgcccgcaaaacgtggttcgcttcga tcacgaacacaaaaccaacaacaatcgatgaccgaaacggccagtaatatttctcaattg agtcacaagcgtccatcaccattggattcaagcataaataagcgattgaagagcaattca acggtgtcaacgttcaaccaaaccaactcgaaccgatcgaccattcaacagccatcactt tcattacagaatcaagagacagtacaacagcaacaacagaaatcaccacatttgctgcaa catttgatggcaccatcacccgatcgtctacgcaaatatactgggccggccaataaacaa acggccaacgataaaatcgacacacaatggaaatgcaatgttggatacgatgagccaaaa gctcaatcgtccgattcggttcttaagaatttactttgtaccatggcatcacaaccagaa gttccaatcagtacgattgatttgttgaaagagaatcgtaaattggacttgggacagagt aatttcgaatatggaccaaaggtgaatgacacaaatggaatggattccgatgaatatggg ctagttgacgatatattccttgtgaacgaattgaatagaagcttccccaactcaaatggt gacacatcaccattcacttcatccgatgatgatttggttgggctcatgaagtcgtccatt gacgagaagaaaccgtttgaaagttttgaaaaacagatcaccatcactgttccacagcca cctccactttcgtcggactctttaatggtcggaggatgcctctttgatggtattaccgat caaacaaacattttgcctgcatcgttgatttcgccaatgggaacagagaacagtagctat gattttaatatgttcgaccggactgatatgggtgccgatagtttgttggatgtttgggct gatgaaatgaaataa

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