Contarinia nasturtii (swede midge): 116347897
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Entry
116347897 CDS
T08003
Name
(RefSeq) homeobox protein araucan isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cns03000
]
116347897
Transcription factors [BR:
cns03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
116347897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
116347897
NCBI-ProteinID:
XP_031634559
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MASYTQFGYGYPSANQLLSASGQTPSGSAQSPVPGNSGTTSSGTLVGNANNGGPSISPGC
GSATGVQSGAISPGAQSQTSNAAAPVQSCCENGRPIMTDPVSGQTVCSCQYDSARLALSG
YSRIPATGVSVYGTPYPSTDQNPYPSIGVDSSAFYSPLSNPYGLKDSGPPGTDMGAWTSA
GLQPTTGYYPYDPALAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKI
MLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAMVSDDEKDKEDSDLDK
SREHKELHRVKSEHCKDEDDDDITDDERKVEQIIGHPGPMQSVNYHRGQHHLHHPPYHHH
HAMLSAWSASGGIKEEMVPGSKNQTSSDCGIPLPASKPKIWSLAATAASKTPPPIVQSQH
GAWINPYHHSHTHPHSSHNPHSHQSGDLSSMMMGNSPTNPIGNTVLQVSGSNTIQSSTSH
LHNTQQHQVSNPQAMTGNYANNPYSRYTGFLTYNTTNTIPHHTNNTNTHQMHPTLSNSNK
NSNTNSTNSNSNIQNLTTPQQQLQQSMGFQEAQTDFGSQISLTSLRNQNDLTSLRQIALT
PPQTPPNLKSNVTHWNDNVNNNQNSNQNGGYPDSAAFKPFFKSGQMNNGFVAPV
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttacacccaatttggttacggctatccgtcggcaaatcagttactaagtgca
agtgggcaaactccatctggaagcgctcagtcgcctgtgcctgggaacagtggaactact
tcgtcgggtacactcgttggaaatgcaaataatggtgggccttcgataagtcctggatgc
ggttcagcaacaggtgttcaaagcggggcaataagtcctggtgctcaatcacaaacatca
aatgctgcagcaccagtacaatcgtgttgcgaaaacgggagaccaattatgacagatcct
gtttccggacaaacagtttgttcgtgtcaatatgactctgcaagattggctttgtctggt
tactctcgcataccagcgactggagttagcgtttatggaacaccatatccatctacggat
caaaatccatatccatctattggtgtagatagttcagctttttattctccattgagtaat
ccatatggtttaaaagatagcggaccacctggtactgatatgggtgcttggacatcagct
ggacttcaacctacgacaggatattatccatatgatccagcgttagctgcctatggatat
ggtgccggatatgatttggccgcacgtcgaaaaaatgcgacacgtgaatcgacagcaact
ctcaaagcgtggctaaatgaacacaaaaaaaatccttatccaacaaagggcgagaagatt
atgcttgcaattattaccaaaatgacattaactcaagtttcaacttggtttgcaaatgcg
cgacgacgactcaaaaaggaaaataaaatgacatgggaaccaaaaaataaaaccgatgat
gatgatgacgcaatggtatccgacgacgaaaaggataaagaggattcagacttggataaa
agccgtgagcacaaagaattgcatcgtgtgaaatctgaacactgtaaagatgaagatgat
gatgatatcactgatgacgaacgtaaagtagaacaaataattggacatccaggcccaatg
caatctgtaaactatcacagaggtcaacatcacttacaccatccgccatatcatcatcat
catgcaatgttaagtgcatggagcgccagtggaggaattaaagaagaaatggtacctggt
tcaaaaaaccaaacaagcagcgactgtggcatcccccttccagcatcgaagccgaaaata
tggagcttagctgccaccgccgcttccaaaacacctcctccaatagtacaatctcaacac
ggcgcctggataaatccatatcaccactctcatacgcatccccacagttcgcacaatcct
cattcacatcaaagtggcgatctttcttcaatgatgatgggcaattcaccgacaaatcct
atcggcaataccgtactccaagtgagcggatcgaatacaattcagagttccaccagtcat
ctgcacaatactcaacagcaccaagtttcgaatccgcaagcaatgaccggaaattatgcc
aacaatccttattcgcggtacacggggtttctaacatacaatacgaccaatacaatacct
caccatacgaacaatacaaatacgcatcaaatgcatcccacgctcagcaattccaacaag
aacagcaataccaattcgaccaactccaactcaaatattcaaaacctgacaacaccacaa
caacagctacaacagtcgatggggtttcaagaagcccaaacagattttggaagccaaatc
agtttgacgtcccttagaaatcaaaatgatttgacatcattacgacaaatcgctttaacg
ccaccacaaacaccgccaaatctgaaaagtaatgtaacgcactggaatgataatgtgaac
aataatcaaaatagtaaccagaatggtggctacccagatagtgcggcttttaaaccattt
tttaaaagtggccaaatgaataatggatttgttgcaccggtttga
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