Contarinia nasturtii (swede midge): 116347935
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Entry
116347935 CDS
T08003
Name
(RefSeq) uncharacterized protein LOC116347935 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cns03000
]
116347935
Transcription factors [BR:
cns03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116347935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-met
zf-C2H2_6
STL11_N
DUF4428
zf-C2HE
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
116347935
NCBI-ProteinID:
XP_031634608
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MCIDAFTNMAVNSQPRSITPEGQQEYDVTRMREEDFERLAVYIVPDVPCERGTIGRAEKT
LPRSLTLKPSLVLSTPSVKTEGVWSTGVIPRGTRFGPFEGIPTPNYPSDKSSWRYFWRVQ
GTCHVTYGNIKIFKDNDYYYLDGSDTRQANWMRFVASAYSLQVMNLVACQHQDNIYFYTI
RDIMPNEELMVWYCRDFAKRLGYDVDPERTTYSICKEEAMKKLPAKTSPVAPEIAFNHVK
YVMGFALPPRSSPSPSPPLQTIVQPQLQAQALAQQTQQSLLLKNGRPLHQTVVHLRETQE
VRNMLPVQVLLRDQSPIREGSKEKDAHSPISHKDTHYEHQLTPNDGSVRSDEGYQSNEHF
EDGLTPPEDYSDSEDENNYVLDCSKKAIEPKETVLCKSEDKNEYRKVKMKMPLKYEFKKK
SIKLEQMSKDSPSTDDELMPLQSKEPSSPRRVITPATSTVIVLENSSAHTIVPLTKPYYE
ATASETVSPPIMGYTPPSSSILETILTGNRVISGTRQPNATPPPTSPTEMAYSYKKSHRY
GNACSPDSSSNYTPNCQSISAPETIETRDMPKERSPTPPTVPSLAYASQTSTPASMTYEQ
HRTSPFSYMLSSANNVISHVPSSTYSPPLSNGHYERISNHSLSPSGSLLSLQGQLLSHPI
MTPLTPLQRLSPSMRASPPCSLSPDGSCTRSGSPLSPGGTSRGYRSLPYPLKKKDGKMHY
ECNVCCKTFGQLSNLKVHLRTHSGERPFQCGVCTKSFTQLAHLQKHHLVHTGEKPHQCNI
CKKRFSSTSNLKTHLRLHSGQKPYACDLCPQKFTQFVHLKLHKRLHTNDRPYVCQGCDKK
YISASGLRTHWKTTSCKPNNIEEELALAAAATNECLDKEHENDPKDMYEVQQQIHMRNID
HHHSSNSPSRLLSIHSQAHPLQSNPPMHQPQKNHHMQHQQTQQQPQSQSVQQQPSTAQQT
QSNGHYTHHSHQQSNGERPSVIESNQALIIECT
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgtgcattgatgcatttaccaatatggcggttaatagtcaaccgcgaagtattacacct
gaaggtcaacaggagtatgatgtgactcgtatgcgagaagaggactttgagcgattggcg
gtttatattgtgcccgatgttccatgcgaacggggaactattggtcgagccgaaaaaact
ctgccaagaagcttaacattaaaaccatcactcgttttatctacgccaagtgtaaagact
gaaggtgtgtggagcacaggtgttattccacgtggaacacgttttggaccgttcgaagga
attccaacaccaaactatccaagtgataaaagttcatggagatatttctggcgggtgcag
ggaacatgtcatgtaacatacggaaatattaagatattcaaggacaacgattactattat
cttgatggttctgatacgagacaggcaaattggatgcgatttgttgcgtccgcctacagt
ttacaagtgatgaatttggttgcctgtcagcatcaggataacatttatttttacacaatt
cgcgacattatgccgaatgaagagctaatggtgtggtattgtcgtgattttgccaaacga
ttgggctatgatgttgaccccgaacgcacaacatattccatatgtaaggaagaggcaatg
aaaaaattaccggctaaaacatcaccggtcgctccagaaattgcatttaatcatgttaaa
tacgtaatgggatttgcattgccgccacgttcatcgcccagcccatcgccaccgttgcaa
acaatcgttcaaccacaattacaagctcaagctttggctcaacaaacacaacaaagctta
ttgctcaaaaatggacgtccgcttcatcaaactgttgttcatttacgtgaaacacaagag
gtacgaaatatgttgcccgtacaggtgctattacgtgatcaatcaccaattcgcgaaggt
agcaaagaaaaagatgcacattcaccaatctcacacaaagatacacactatgaacatcaa
ttgacaccaaacgatggctcggtacgatcggacgaaggctatcaaagtaatgaacatttt
gaagatggcctcacaccaccggaagattatagtgacagcgaagatgaaaataactacgtt
ttggactgttcgaaaaaagcaattgaaccgaaagagacggtactatgtaaatcggaagat
aaaaatgaatatcgcaaagttaaaatgaagatgccattgaagtatgaattcaaaaagaag
tccatcaaattggagcaaatgagcaaagactcaccgtcaaccgatgatgaactaatgcca
ctacagtccaaagaaccatcttcgccacgtcgagtgataacgccagccacaagcacagtg
attgtgctagaaaactcatcagcacatacaattgttcctcttacgaaaccatattatgaa
gcaaccgcttcagaaacggtatctccaccaataatgggttacacaccccccagctctagt
attttagaaactattttaaccggaaatcgtgtaatttctggaacgcgacaaccgaatgca
acaccaccaccaacgtcaccgactgaaatggcttattcctataaaaaatctcaccgatat
ggcaacgcatgcagtccagattcgagctcaaattatactccaaattgtcaatcaatcagt
gcgccagagacaatcgaaacgagagacatgccaaaggaacgatcaccaactcctccaact
gtaccatcattagcttatgcaagtcaaactagcacaccagcttcaatgacgtacgaacag
catcgaacatcaccattctcgtacatgctttcatcggcaaacaatgtcatttcgcatgta
ccaagttctacatattcgccaccattgagcaatggtcactatgaacgcatttccaatcat
tcactatctccatcgggcagtttgctctcattacaaggtcaacttctttcccatccgata
atgacgccgctaactccattgcaacggctgtcaccgagcatgcgagcatcacctccatgc
agtcttagcccagatggatcgtgcaccagaagtggtagcccactaagtcccggcggtaca
tcacgtggctatcgcagtttgccttatccattgaaaaagaaagatggtaaaatgcattac
gaatgcaatgtgtgttgcaaaacatttggacaattatcgaatttgaaagtgcatttgcgt
acgcattccggtgaacggccttttcaatgtggtgtctgtacgaaatcgttcacacagctt
gcccacctacaaaagcatcatcttgttcacacaggcgaaaagccccatcaatgcaatatt
tgtaaaaaacgattctcatcaacatcaaatctcaaaactcaccttcgtttgcacagtggt
caaaagccgtatgcatgcgatttatgtccgcaaaaattcacacaatttgtgcatttaaag
cttcacaaacgattacacaccaacgatagaccatatgtatgtcaaggttgcgataaaaaa
tacattagcgcatcgggacttcgaacacattggaaaacgactagttgcaaaccaaataat
attgaagaagaattggcacttgcagccgccgctaccaacgaatgcttagataaggaacac
gaaaacgatccgaaggacatgtatgaagtacaacaacaaattcatatgcgaaacattgat
catcatcattcgtctaattcaccgtcgcgtttattgagtattcactctcaagcgcatcca
cttcaatcgaacccaccaatgcatcaaccccaaaagaatcatcacatgcaacaccaacaa
acacaacagcagcctcaaagccaatctgttcaacagcaaccatctacagctcaacagaca
caatcgaatggacattatacgcatcattcacaccaacaatcaaatggcgaacgtcctagc
gtcattgaatccaatcaagcattaataattgaatgcacgtaa
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