Contarinia nasturtii (swede midge): 116348009 Help Entry 116348009         CDS       T08003                                  Name (RefSeq) protein sprint isoform X1   KO K23687   Ras and Rab interactor 2/3 Organism cns  Contarinia nasturtii (swede midge) Brite KEGG Orthology (KO) [BR:cns00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cns04131]     116348009 Membrane trafficking [BR:cns04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     116348009 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RIN1 VPS9 RA SH2 RA_2 Lpg0393_VPS9 FERM_f0 DUF5570 Motif Other DBs NCBI-GeneID:  116348009 NCBI-ProteinID:  XP_031634713 LinkDB All DBs Position Unknown AA seq 1693 aa AA seqDB search MLPPIASPTSPQDVQMTDLNILTVSPGSMSSQQKLLTSPVENRPLNNHSPLSISSVKSTN TLRNNIDMKNELYKKRTSLNLHENGNGEMFNSCDTSSTSSSSSSSSSSSMGQQPLKLATV KRCSRNLDNIRYRFELQNNNSNNDNVNNNNSDSRRFNRSSSDSDGAEPQKQQQQHIDTVA VVINENGKMRRTRRKTADKSQNGNAQNNETDDDDDNNNEFSDRQNGNASDRSTQKRSDSI TSKESGSVGSDDYFLCEKFKNTLNAKLCDAVVDGAVVLDENGTAYRRLSLELLSPHEGPL GRRYAEIAPSKNNANNKWTDAPHFLRPRRMPLGSVDSEDGNALVDDELHNLLPGTREVSA DDLSQSRASLVSSSDGGILAEGETSSSEASGDSTSPPCDLGLYERLLLTHPVWFLPGIQR AGAVHLLQGKEEGNFVVRGSSQANTMAVSVRLPPDTGPYIEHYLILSENGVLSLESSRFE FNSIPALIDHYAKCCDELPVQLTLPRAFREASNRQQLGSLALLGQEFWRYPMANPRPSAN TSPTPASIASKTESSGLGTTMFSANQHKIVTNSQHTILSGTVFSPGTPSDTASSLSSFTS TGQQMLSPESIDSVMLSPVDQTGIIGKTSTFKTQNRKSLDLEKITTFSNRSSPPNTGNDS NSNNNNINNNVFNEQHNGNNIRSVRPTPPSTLNVIPLRIPPAPPPRWTKPSSQSPTDSIT PTASEHISSTNFTITTTVTEISNNIHKQCSPFTEILSPNANTAFQTISKRMSPEGECKTS ADTLSSQGSKRWQSQSSKDSSQNNRKVVSPTSQAAGNRTKRGRVRKESTHYQKSDILESP QVYCRSNLGDKISDYEDLWTPENGGSNTSFNKGPALSSFRSEHRPDLLPETPTVTSLSEN ILSPVGSISSSASHYNAQKSMKTPSEHSASPAFDDENGVILRHNAKNQMEQNNNDCQKLN DVLSPTMEINRLQIAADFNQESMLQQPRNRLGLLLTPTTEFPSPINESTPIQTPSQTHCK RDSPFYAEPADALAGNVVRRSQRSNLLPKSQRHSEPPKAQSRFNNNTQFCQVLSPIDSEK SHHISGSLDELKKKPRNKPIRSGRLDPWPLDSSWEFQLGDGNDEQNDYDTDANWKNQTNG ELLKKSPSLNGIQSNNVRHENRLTINQIIAQKLPELKILELLQKTTLPFSASPDLSRNDA TMTSFGKSSRLSAYDNVERAAHSGYGTSMMCHDSAHSDDGTVFSEPWDSSQWDSFLPHDD TISESIHLSKCQPAISEDDTIMDENYSHRNHQPQKIATILRSRSCRDREVLSHPRNKITT NGPGDSIAAYALTLAKDPTSTFARNIENFIECTKESRESSPQIIMRNMRQFMSGMKNYLV KHGEGDFQQEVLRARSMLKPDEFLNLDTILEGVMHQLVVLPLREHLYGLFVDYYTGTGDI QLLVDNVKASVGKSPTDFGLRPCIQTPSPTAMQRISLLILRLQEAELPLAKLDILLSIVT SIIEATTNTQSHALGADDFLPLLVYIVAKCGFIGAEIEAEFMWCLLQPSLLNGEAGYYLT ALCSAVHVLKSFITNEQDGTGSLDFRSSSLPACSSVLRVIIPDEYNGSLQTRTLPIRPHT TTREVCRTIAHKARVTNPQDYALFKLVDGEETLLLDSDCPQEARLAARGKPCMLAYKRID AKIAWPTTSQAFQ NT seq 5082 nt NT seq  +upstreamnt  +downstreamnt atgctgccgccgatcgcgtcaccaacatcaccgcaagatgttcaaatgactgatttaaat attttgacggtgtcccccggttcgatgtcatcacagcagaaattgttgacatcgcctgtt gaaaatcggccattaaacaaccattcaccattatcaatatcatcagtcaagtcaaccaat acgctgcgcaacaacattgacatgaaaaatgaattgtacaaaaaacgaacatcgctgaat ttgcacgaaaacggaaatggtgaaatgttcaatagttgcgacacatcgtcgacatcatca tcgtcgtcgtcgtcttcgtcatcgtcgatgggtcaacagccattgaaattagcgaccgtt aaacgttgttcgcgtaatttagataacattcgctatcgattcgaattacaaaacaataat tcgaataacgataatgtcaacaataataatagtgattcgcgacgatttaaccgaagtagt tcggatagtgatggggccgaaccacaaaaacaacaacaacagcacattgatacagttgct gtggtcataaatgagaatggaaaaatgcgacgcaccagacgaaaaacagcagacaaatca caaaatggcaatgcacaaaacaacgaaaccgatgatgatgacgataacaacaacgagttt agcgatcgacaaaatggcaatgcaagtgatagaagtactcaaaaacgtagcgattcgatc acaagcaaagaatccggtagtgttggcagtgatgattattttttgtgtgaaaaatttaaa aacacattaaatgcaaaactctgcgatgctgttgtcgatggcgccgttgtattggacgag aatgggacggcctaccgacgtttatcattggaattgctgagtccacacgaaggcccattg ggtcgacgctacgctgaaattgcaccgagcaaaaacaatgcaaacaataaatggactgat gcgccacattttttgcgaccgcgtcgtatgccacttggatccgttgattcggaagatgga aatgcacttgtcgacgatgagctacacaatctattgccgggcacacgagaggtatcagcc gatgatttgagtcagtcacgtgcatcgttggtgtcaagttcagatggcggaattttggcc gagggcgaaacatcgtcgagtgaagcctctggagactcaacaagtccaccatgtgattta ggtctatacgaacgtttgctattaacacatccagtttggtttctgccaggaatacaacgg gccggtgctgttcatttgctacaaggcaaagaagaagggaatttcgttgtacgtggctca agtcaagcgaatacaatggctgtttcggtacgtttgccaccagacaccggaccctatatt gaacactatttgatattatcggaaaatggtgtactgagtttggagagttcacgttttgaa tttaattcaataccggctttgattgatcactatgcaaaatgctgtgatgaattaccggtg caattgacgttgccgcgagcattccgtgaagcatcgaatcgtcagcaacttggatctctt gcattgcttggccaggaattttggcgttatccaatggcgaatccacgtccatcagcaaat acaagcccaacaccagcatcgattgcatcaaaaacagaatccagcggcttgggtacaaca atgttcagcgcaaatcagcataaaatcgtgaccaacagtcaacatacgattctgagtggc actgtgtttagtccgggcacaccatccgacaccgcatctagtctaagtagttttaccagc actggccagcaaatgttaagtcctgaatcgatcgatagtgttatgttatcgccagtcgat caaaccggtatcattggtaaaacgagtacattcaaaacacagaatcgtaaatcattggat ttggaaaaaattacaacgttttcaaatcgatcatcgccaccaaacaccggcaacgattca aacagcaataataataatatcaataataatgtattcaatgaacaacataacggtaataat attcgcagtgtacgaccaacaccgccgagtacattgaatgtaattccattgcgaatacca ccagccccaccacccagatggacaaaaccatcatcacaaagcccaaccgattcaattaca ccaactgccagcgaacacatttcatcaactaatttcacaatcaccacaactgtaacagaa atctcgaacaatattcacaaacaatgctcaccattcaccgagattttatcaccaaatgca aacacagcgttccaaacgatttcaaagcgtatgtcaccagaaggtgaatgcaagacatcg gccgatacattatcatcacagggttcaaaacgttggcaaagccaatcaagcaaagattcc agtcaaaataatcgaaaagttgtatcgccaacgtcacaagcggccggcaatcgaacgaaa cgtggccgtgtacgcaaagaatccacacattatcaaaaatcagatattttggaatcgcca caagtgtattgtcgcagcaatcttggcgataaaataagcgactacgaagatttgtggaca ccagaaaatggtggcagcaacacaagtttcaacaaaggaccagcgctctcaagttttcgt tctgaacatcgacccgatttgcttccggaaactcccacggtcacatcgttatctgaaaat attttgtctcccgttggttcgatttcatcgtctgctagtcattataatgcgcaaaaatct atgaaaacgccaagcgaacacagcgcatcgccagcatttgatgatgaaaatggtgtaatt ttgcgacataatgccaaaaatcaaatggaacaaaataataacgattgtcaaaaattgaac gacgtattgagtccaacgatggaaataaatcgtttgcaaatcgcagccgatttcaatcaa gaatcaatgttgcaacagccacgaaatcgtttgggtttattgttaacgccaaccactgaa ttcccatcgccaataaatgaatcgacacccattcaaacgccatcgcaaacacattgcaaa cgtgatagtccgttttatgcggaaccagccgatgctcttgccggaaatgttgtgcgacgt tcacaacgttcaaatttactaccgaaatctcaacgccattcggaaccaccgaaagcacaa tcgcgattcaataataatacacagttttgtcaagtactttcacccattgattccgagaag agtcatcacatatctggctcactggacgaactgaaaaagaaaccacgtaacaaaccgata cgcagtggtcgtcttgatccatggcccctagattcgagctgggaatttcaattgggtgac ggaaacgatgaacaaaatgattatgatacagacgcaaattggaaaaatcaaacaaatggc gaactcttgaaaaaatcacccagtttaaatggaattcaatcgaataatgtacgacatgag aatcgtttgacaatcaatcaaataatcgcacagaaattgcccgaattaaaaattctggaa ctattgcaaaagactacattaccgttcagtgcatcgcccgatttatcgagaaatgatgca accatgacaagttttggtaaaagcagtcgattgtctgcttacgataatgttgaaagagct gcacattctggctatggcacttcgatgatgtgccatgacagtgcacattcagatgatgga acagtcttttcagaaccatgggatagctcacaatgggactcatttttgccacatgatgat acgatatccgagtcgatacacctttccaaatgccaaccagccatttctgaagatgataca atcatggatgaaaattattcgcatagaaatcatcaaccgcaaaaaattgcgacgattctg cgttctcgcagttgtcgtgaccgcgaagtgctgagtcacccacgaaacaaaataacaaca aatggtcccggagattcgattgctgcttatgcgcttacattggcaaaagatccaacgtca acgtttgcccgaaacattgaaaatttcattgaatgcacaaaggaatcgcgtgaatcatcg ccccaaattataatgcgaaatatgcgacaatttatgagcggtatgaaaaattacttggtg aaacatggtgaaggcgattttcaacaagaagtactacgggctagatcaatgctcaaacct gatgaattccttaatttggacactattttggaaggagtcatgcatcaattggttgtgtta cctctacgcgaacatctttacggtttgttcgttgattattatactggcaccggcgatatt cagcttctcgttgacaatgtcaaggcttcagtcggaaagtcacccaccgattttggcctt cggccttgcattcagaccccatcaccgactgcaatgcaacgaatctcgttgctcatctta cgtttacaagaagccgaattgccacttgccaaattagacattctgctgtcgattgtcaca tcgattattgaggccacaacaaatacccaaagtcatgcgctgggtgccgatgactttttg ccattgctcgtgtacattgttgccaaatgcggttttattggtgctgaaatcgaagcagaa tttatgtggtgtctattacaaccatcgttacttaacggagaagctggatactacctaacg gctctatgtagtgctgttcatgtacttaaaagttttataacaaatgagcaagacggtacc ggttcattagattttcggtcatcttcgttacccgcctgctcatctgtattacgtgtgata atacccgacgaatacaatggctcattgcaaacgcgcacgttaccaattcggccacacact acaacgcgtgaagtttgccgaactattgctcacaaggcacgcgttacgaatcctcaagat tatgctctattcaaactagtcgatggagaagaaacgttgcttctggattcagactgtcca caagaggctcgtcttgctgcgcgcggaaagccctgtatgctagcatacaaacgaatcgat gcgaaaattgcatggccaacaacatctcaggcatttcaataa

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