Contarinia nasturtii (swede midge): 116348019
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Entry
116348019 CDS
T08003
Name
(RefSeq) uncharacterized protein LOC116348019
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116348019
Membrane trafficking [BR:
cns04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
116348019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
116348019
NCBI-ProteinID:
XP_031634727
LinkDB
All DBs
Position
Unknown
AA seq
1349 aa
AA seq
DB search
MVRVFSIYQFDGQSIHRIPDDILSASLIDANHLALAKSDHVIEIVSLQRSDELNSRRFTS
IDSTDENNIHTKYAFPTVDEVAKMVYCKFGNFIATVECKTSNSGVEHSFLRVYTNWTNCK
TASNDNITDSMNFMTCNVTIRARIAGRVTPSTNNMNCLEVIEIPTIVHSCSQSQSSHPYE
LAVCQRTGTIVCANDRFLKIYKFDECVNENTHFKYIDFLEVPFEVELDFIPTQLSIDEHI
VGTANSEYMCVFKISEHSYFNTANSLTTSSSLSVMAPMPVCPYVDTSTDSVFDYQNASKK
FLTSITSNISSTFDHQSMEMNGKMCRDRSIELKPNNIDSAIPLCTLRHFSATNDDAYKDY
MLRILVQVKQHDANDPFQCLVLSPIYSRKQKESETSNLFRTHNGSAFIGISVLLATVNEG
YLYQFSNNEKWTINENDAQTNGLIATYSFTSPIINVCVTDYVIHALTDHGIETYTHSIGH
KLFNNIYEYSVNDEQYNSDAAPRLEEQICLIGLRPFLGVQRMFHTPENLILLARSLNSPL
NADKSKLKTKTDSMSSWTLYSLKMSPPDVLYKDFIELAANHKTGLTELITSQNSDKVRIY
SLLLSEGHVILRIAKDIYTSELNKFTPSYSKAIDLLFLESCHQLADFYVMSQNRDQYCLA
YPYYVMGDLKLNQVYNRIMTIIGDIPQDSKSMVGAVHTLKTLILKSTDEHEELARRLTST
VETSTNRNFGEKLMEFFAKYAPNELAAIGLNSIIFRDTMGGKMCEIILQTNTSDQLTKED
KLILILDAIRCDRKDRALDLLDSFNAVDLHHLLMSNWSLLFETTTVKKTGKSITTFSEVT
ESYLLPASIKNHAIRSALLATFRNLLIDSNVLNIELILKLFMDFLATNFGQINLYMSVQS
ILEHLLEAYFHRLYVVRRYSDTLSSASQDMLTTKNMPEFQSRSGNNNDSLGSTSSDNATT
SIGLNSINSGHKMNDSTQSEMRGSSTNGANDFTSGRKHPQNLFSSSFNAEALKILTRIYL
SSLKSHTNDLEMNTDEKSIYIKYVKFLRENFNRVYSHHISQNTNCDGRSLTIDETRFCTD
FTNNDAKNDIKLTKIPILFLLQRPSYLNAMPPIGQLEATASSLNGKEDGFEKTEKGSKAI
GVVLKLQSLLSSGILTRDILKEVLHFIESNIPFFGVDSFLALLMPFEMCIDYLIEMRPEY
LLDYAKCASTDEQKWQYVLTHITMQFDRISQNRSQTFYETLLKDHLDYLVHTKRLPEVLN
IVPMKYFDDGIAQMISRAQEKIDNGENVENAEIFPENNNNALITNFLKSAIDTDRSERLN
EMIKTTGFQLYNTFIGGNHPDTTRSAADN
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagtgttttcaatttatcagttcgatggtcaaagcatacatcgaattccggat
gatattctgtcggccagtttaattgatgcaaatcatttggctctggccaaatcggatcat
gttattgaaattgtctcgttgcaaagatcggatgaactgaattcgagacgtttcaccagc
attgattcgaccgatgaaaataatattcatacaaagtatgcatttccaacggttgatgaa
gtggccaaaatggtctactgtaaatttggtaatttcatcgcaacagtcgaatgtaaaaca
tcaaattccggtgtggaacattcctttttacgcgtttacacaaattggacgaactgtaag
actgcatcgaatgacaatattacagatagcatgaattttatgacatgcaacgtaacgatt
cgtgcacgaattgctggtcgcgttacaccatccactaacaatatgaactgtctcgaagtg
attgaaataccaacaatcgttcatagttgcagtcaaagtcagagcagtcacccttacgaa
ttggctgtatgccaacgcaccggcactattgtctgtgcaaatgatcgatttttaaaaatc
tacaaatttgacgagtgtgtgaatgaaaatacgcatttcaagtacattgactttctcgag
gtaccgtttgaggtcgaattggactttattccaacgcaattgagcatcgatgagcacatt
gttggcactgccaattcagagtatatgtgtgtgtttaagatttccgagcacagttatttt
aatacggcaaatagtttgaccacatcgtcaagcttaagtgttatggcaccgatgccagtc
tgtccatatgtggacacatccacagactctgtatttgattatcaaaatgcgtcgaagaaa
tttttaacatcgatcacatcgaatatttcatcgacattcgaccaccaatcgatggaaatg
aatggaaaaatgtgcagagatcggagcattgaattgaaaccaaataatattgatagtgca
attcctttgtgcactctgagacatttttcggcgacaaatgatgatgcatacaaagactat
atgctccgaattctggtacaagtaaaacagcacgatgcaaacgatccattccagtgtttg
gtcttatcgccaatttatagtcgaaaacaaaaggaatcggaaacgtcaaacttgtttcga
actcataatggcagtgcttttattggaatttctgtgctgcttgcaactgtgaatgaaggc
tatttatatcagttcagtaacaatgaaaaatggacgataaatgaaaatgatgcgcaaaca
aatggtttgatagcaacatactccttcacttcgcccataatcaacgtttgtgttacggat
tatgtcatacacgcattgaccgaccatggcatcgaaacctatactcatagcattggacat
aaactcttcaacaatatttacgaatatagtgtgaatgacgaacagtataattccgacgct
gcaccacgtttggaggagcaaatttgtttgattggccttcggccatttttgggtgttcaa
cgaatgtttcacacgcccgaaaatctcattttattggcacgaagtcttaattcaccgttg
aatgctgacaaatcaaagttaaaaacaaaaactgactcgatgtccagttggactttgtac
agtttgaaaatgtcaccaccggatgtgctttataaggatttcattgaattggcagccaat
cacaagactggcttaaccgagttgataaccagtcaaaattcggataaagttcgaatctat
tcactgttactaagcgaagggcacgtaattttacgtattgcaaaagatatttataccagt
gaattgaacaaattcacgccaagttattcaaaagcgattgatcttttatttcttgaatca
tgccatcagttggccgatttttatgtgatgtcacaaaatcgagatcagtattgtttagca
tatccatactatgtaatgggcgatttgaaattgaatcaagtatataatcgtattatgacg
atcatcggtgacattccacaggattcaaagtcgatggttggtgctgtgcacaccctgaag
acattgattctaaaatcaaccgatgaacatgaagaactggcacgacgtttgacgtcgact
gttgaaacgagcacaaatcgaaattttggcgagaaactcatggaatttttcgcaaaatac
gcaccaaacgagttggccgcaattggactgaattccattatattccgcgacaccatgggt
ggcaaaatgtgtgaaatcattttacaaacaaacaccagtgaccaattgaccaaagaggat
aaattgattttaattctggatgcgattcgttgtgatagaaaagatcgtgcactggatctt
ctggatagtttcaatgccgttgatttgcatcatttgctcatgtcaaattggtcgctttta
ttcgaaactacaacggttaagaaaaccggaaaatcgataacaacattttccgaagtaacg
gaatcatatctgttaccagcgagcattaaaaatcatgcgattcgaagtgcactattggca
acatttcgaaatttattgatcgattcgaatgtcttgaatattgaattgattttaaaattg
ttcatggattttcttgccacgaatttcggtcaaattaatttgtacatgagtgtacaatcg
attctggagcatttgcttgaggcatactttcatcgtttatacgtagttagacgatacagt
gatacattgagcagtgccagtcaggatatgctcacaacaaaaaatatgccggaatttcaa
tcaaggtcgggcaacaataatgacagtcttggtagtacatcgagtgacaatgcaaccact
tcaattggattgaatagcatcaatagtggccacaaaatgaacgattcaacgcaatcggaa
atgaggggctcatcaacgaatggggctaatgattttacatccggacgaaaacatccacaa
aatctattcagttcatcgtttaatgctgaagcgctgaaaattttgacgcgcatttatttg
agctcattaaaatcacatacgaatgatttggaaatgaataccgatgaaaaatccatttat
attaagtatgtgaaatttttgcgagaaaattttaatcgtgtatattcacatcacatatca
caaaatacaaactgtgatggccgaagtttaaccattgatgagaccagattttgcacggat
ttcactaataacgatgcgaaaaatgacattaaattaactaaaattccgatcttgttcttg
ttgcaacgaccgtcgtatttgaatgcaatgccacctattggacagctggaagcaacggct
agtagtttgaacgggaaagaagatggttttgaaaaaaccgaaaaaggatcgaaagcaatt
ggtgttgttttgaaattgcagtccttgctctcaagcggaattttaacgcgtgatattcta
aaggaagttcttcacttcattgagtcaaacattccatttttcggtgttgatagttttctc
gcacttttgatgccatttgaaatgtgtatcgattatctcatcgagatgcgacccgaatat
ttgctagattacgccaagtgtgctagcaccgacgaacaaaaatggcaatacgttcttaca
catattacgatgcaatttgatcgcatttcacaaaatcgatcacaaacattttatgaaaca
ctattgaaagatcatctggactatttggtgcacacgaaacgtttgcccgaagttctcaac
atcgttccgatgaaatactttgatgatggcattgcacaaatgatatccagagcacaagag
aaaattgataacggtgaaaatgtcgaaaatgctgaaatatttccggaaaacaataacaat
gcgctgattacaaatttcttgaaatcggccattgataccgatcgttccgagcgactcaac
gaaatgattaaaacgacgggatttcaactgtacaatactttcatcggtggaaatcatccg
gacaccaccagatcggccgctgacaattaa
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integrated database retrieval system
