Contarinia nasturtii (swede midge): 116348039
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Entry
116348039 CDS
T08003
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116348039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116348039
04131 Membrane trafficking [BR:
cns04131
]
116348039
03029 Mitochondrial biogenesis [BR:
cns03029
]
116348039
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cns04812
]
116348039
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
116348039
mRNA cycle factors
P-body specific factors
116348039
Membrane trafficking [BR:
cns04131
]
Others
Actin-binding proteins
Myosins
116348039
Mitochondrial biogenesis [BR:
cns03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
116348039
Cytoskeleton proteins [BR:
cns04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
116348039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
DUF5759
AAA_16
FUSC
Erf4
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
116348039
NCBI-ProteinID:
XP_031634749
LinkDB
All DBs
Position
Unknown
AA seq
1842 aa
AA seq
DB search
MAKRHTAYTTGARVWIPNATTVWEGAQLVGDYHDGDKQLHIQTDAGMDRVIEIRSDNDLP
LLRNPTILIGQNDLTALSYLHEPDVLHTLEVRFCDRQTIYTYCGIVLVAINPYAELPLYG
PDIIRMYRGQTHQSLEPHIFAVAEEAYAKLEREKCDLSIIVSGESGAGKTVSAKYAMRYF
AAVGGNEFETQIERKILASNPIMEAIGNAKTTRNDNSSRFGKFTKLLFTNRMNVMSLTGA
TMNTYLLEKSRVVFQANGERNYHIFYQLCAARDQWQDLMLDHQQTFRYLNQGDTPNINRV
SDLDQFSETVAALDTLGFTANDVDDIVKTCAAILHLGNVNIAPKRSSKEIDQEECVVQSD
DLHLNLFADIMQVDRDQLRKWLITRQIESINEHVLIPMNHVAAEMARDALAKHIYAKLFQ
HIVNNVNKNLESGHKQHCFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNQHIFKLE
QEQYLSEGIDWTMIDFYDNQPCIELIESKLGILDLLDEECRVPRGSDESWVGKLNEKCAK
YKHFEKARFGGASFVIKHFSDTVQYQSTGFLEKNRDTISKELVNVMCESNLPICRLLMTL
DESSSSKSKDISLDGRVKINAAKHLDSKPTPKKIQPSKQHKHTVGTQFRDSLTKLISTLH
ATTPHYVRCIKPNDDKVAFKWECQKIVQQLRACGVLETVRISAAGFPSRWTYENFYSRYY
LLGKLSQCNDDERITCTHIVQNHISDEDKYRFGHTQIFFRAGQVALLEQIRTDTRKRYII
LVQSMVRRFIARKNFIRNKQLALGLQRRIRGYLARCKAEKIRRERAVVKIQKKVRGWLCR
LKYHRILRSVLLIQTYGRGLLARRSFDIKMRNYKATVIQRYCRGYLARKKYIERKRKIIL
CQSAIRRYFARREFKKLKAEARQISHIQKMYKGLENKIISLQQRIDELTKSNQQLSKQAA
EVPELQIKLEAKKQIEDELCKVRSMSSQLENQVQTLNKQLDEERDEKLSILDEKAKEEAE
FKQKFFEICTENEQLSREIEALKENQEDVETLHRSHVLSDADDNEIHQAYQKIAQEKEHL
EKENFLLSQEVDRLIKLQPNSYVHSRSVSNVSSVNVDEDFGYASAKNTLELKRDKEHNVT
GLNSNALLHVPLTDKEKLTNIANAPDVNNSPDSYEAFNASTPKRNEILTILKMKNVLQDE
MKKRKIFEKQLRHTQDKLSNLNINAEDSIRVSELEIENEKLHKDILLLRNSIDRGIAEKE
LEAQFIALEEENKRRRDECIQLRSILAQRSHGSPSKINGNIDHSDDQSLQESELLQAFEA
QKVVNRQLESELTALTEENNSKILDLSLEIDELRSERNQYQEIMHNQIRLTEFSEEFHSL
NTLDNSYTPQKQQQNIDYLMSEIRSISASYALVLEENSRMSKSIEKLMQENQILSKRLRQ
NGIDDSIERSESLDSSPMIHKRAPTYQGIFKYRAEDVTKLLQRLVDDLEPRVAKTLAPSL
PAFIVFMCIRYTDIVNDDDQVRKLLTSFINGVKNLTRTRHDKQTTEHRVMWLVNMIKLLN
LLKQYGGLEEHMKLNTPMQNEQQLKNFDLSEYRQVILTTIIVSYQQITQQIQEVIKLHIV
PAILDYDEMARGKQKGKRVSGVFYEPRSLVNQLDHFYELFKMFGLDEIFIDQIFKQFFYY
ICAISLNNLMLRRELCMWKTGMRIRYNISCLEEWARKMKMSTEITEPLTPLIQVASLLQA
RKETERDVKVILDICSTLSTAQVIKILKSYTLDDCEEPIRPAFIEKLTTALNERPIKTPT
DTFTMDEAYVHPLKVVYKYDETHLEEIDLPQILNLNQILTKI
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgacacactgcttatactacgggtgcccgtgtctggataccaaacgcgact
acagtatgggaaggtgcccaacttgtaggcgattatcatgacggcgataaacaattgcac
atacaaacggatgccggcatggatcgcgtcattgaaattcgaagcgacaacgatttgcca
ttgctacgaaatccaaccattttaattggacaaaatgatctaaccgccttatcatatcta
cacgaaccggacgttttacatacattggaagtacgattttgtgatcgtcaaacgatttac
acgtattgtggaatagttttagtggccataaatccatatgctgaattgccattgtacggt
cccgacataatccgtatgtatcgtggccaaacgcatcaaagtttggagccgcatattttc
gctgttgctgaagaagcgtacgcaaaattggagcgtgaaaaatgtgatctcagtattatt
gtatcgggtgagtcgggcgctggtaaaactgtatcagcaaaatatgcgatgcgatatttt
gccgcggttggtggtaatgaattcgaaacacaaattgagcgaaaaattttggccagtaat
ccgattatggaggcaattggtaatgcaaaaaccacacgaaatgacaatagttcgcgattc
ggtaaattcaccaaattattgtttaccaatcgcatgaatgtgatgtcgctgacgggagcc
acaatgaatacgtatttattggaaaaatctcgtgttgtgtttcaagcaaatggcgaacga
aactatcacatattttatcaattgtgtgcggcacgtgatcagtggcaagatttaatgctt
gatcatcaacaaacattccggtatttgaatcaaggtgacacaccaaacataaatcgggta
tcagacttggatcaattctctgaaacagtagccgcactcgatacgctcggttttaccgca
aatgatgtggatgatattgttaaaacgtgtgcggccattttgcatttgggaaacgttaac
attgcaccgaagcgaagttcaaaggaaatcgaccaagaagaatgtgttgtgcaaagtgat
gatttacatttaaatttgtttgccgatattatgcaagtcgatcgtgatcaactgcgaaaa
tggctcattacgcggcagattgaatcgattaatgaacatgttttgattccaatgaatcat
gtggccgctgaaatggcacgggacgccttagcaaaacatatttatgcaaaactctttcag
catatcgttaataatgtgaacaaaaatttggaaagtggccataaacaacattgttttatc
ggtgttttggatatttatggtttcgaaacatttgatatcaattcatttgaacaattttgt
ataaattatgccaatgagaagctacaacaacaattcaatcagcatatttttaaattggaa
caagaacagtatttgagcgaaggcatcgattggacgatgatcgacttttatgataatcaa
ccgtgtattgaactcattgaatcgaagctgggcatactggatctattggatgaggaatgt
cgggtgccaagagggtctgacgagtcttgggtcggcaaattgaatgaaaaatgtgccaaa
tacaagcattttgagaaggctcgctttggaggtgcatcctttgtaatcaaacacttttcg
gatacggtgcaatatcagtcgaccggtttcttggagaagaatcgtgatacaatttcaaag
gagttggtcaatgtaatgtgtgaatcaaatttgcctatttgtcgcttgctaatgaccttg
gatgaaagttcttcttcgaaaagcaaagacatcagccttgatggtcgtgttaaaattaac
gcagcaaaacacttggactcgaaacctacaccgaaaaaaattcaaccgtcaaagcaacac
aaacataccgttggaacacaatttcgagatagtctcacaaaactgatctctacattacat
gcaactacaccgcattatgttcgttgtatcaagccaaatgacgataaagtcgcattcaaa
tgggaatgtcagaaaattgtgcaacagttacgagcttgtggtgtgctagaaacggttcga
atatcagctgctggttttccgtcacgatggacctatgagaatttctacagtcgttactat
ttgttgggaaaactaagccagtgcaatgatgacgaacggattacatgcacacacatcgta
cagaatcacatcagtgatgaggataaatatcgatttggccacacccagatatttttccga
gctggtcaggtggcactgttagagcaaattcgaaccgatactcgaaagcgatacataatc
ctcgtccaatcgatggtacgtcgtttcatagcccgcaaaaacttcataagaaacaagcag
ctggcgttgggtttgcaacgcagaatccgtggctacttggcacgctgcaaagcggaaaaa
atccgtcgcgaacgtgctgtggtaaagattcaaaaaaaggtacgtggttggttgtgccgt
ctaaaataccaccgtattctgcgttcagtgctattgatccaaacctatggccgtggtttg
cttgctcgccgatcgtttgacattaaaatgcgaaactacaaagcgaccgtgattcaacgt
tattgccgtggatatttggcgcgtaaaaaatatatcgaacggaaacgcaagatcattcta
tgccaatcagccatacgtcgatacttcgcgcgacgtgaattcaaaaagttgaaggccgaa
gcacgacaaatttcacacattcaaaaaatgtacaaagggcttgagaacaaaatcatttca
ttgcaacaaagaattgatgaactcaccaaatccaatcagcagctttcgaaacaagctgcc
gaagtaccagaacttcagataaaattggaagcgaagaaacaaattgaagatgaactgtgt
aaagtaaggtcgatgtcgtcgcaacttgagaatcaagttcaaacattaaataaacaattg
gatgaagaaagagatgaaaaattgtcaattctcgatgagaaggccaaggaagaggctgaa
ttcaagcagaaattctttgaaatttgcacggaaaatgaacagttgagtcgtgaaatcgaa
gcactgaaagaaaatcaagaagatgtggagacgctacataggagtcatgtattgtccgat
gccgatgacaatgaaattcatcaagcctaccagaaaattgcacaggaaaaggaacatttg
gaaaaagagaactttttattgagccaagaagttgatcgtctcatcaaattgcaaccaaat
tcatatgttcattcgaggtcggtcagcaatgtatcgagtgttaatgttgacgaggacttt
ggatatgcatcagctaaaaatacacttgaattgaaacgggataaggagcacaatgttacc
ggacttaattcgaatgcattgcttcatgtaccgttgactgacaaagaaaaactgacaaat
attgcaaatgcacccgatgtcaacaactctccggacagctacgaagcgttcaatgcctca
actccaaagcgcaatgaaattcttacgattttgaagatgaagaatgttctacaagacgaa
atgaaaaagcgaaaaatctttgaaaaacaacttcggcacacgcaagataaactcagcaat
ttgaatatcaacgctgaagattcgattagagtctccgagcttgaaattgaaaatgagaaa
ttgcataaggacattttgttgcttcgaaatagtatcgatcgtggtattgccgaaaaagag
ctagaagctcaatttattgcattggaagaagaaaataagcgtcgacgcgacgagtgcatt
caacttcgttcgattttggcccaacgcagccacggatcgccgagcaaaatcaatggcaac
attgatcattccgacgatcaaagtttacaagaaagtgaattgttgcaagcatttgaggcg
caaaaagtggttaatcgtcaattggagtccgaattaaccgctttgaccgaagaaaataat
tcgaaaatattggatttaagtttagaaattgatgaattgcgttcggaacgaaatcaatac
caagagattatgcacaatcaaattcgattaacggaattttccgaagagtttcacagtctc
aacacattggacaatagttatacaccgcaaaaacagcaacaaaacatcgactacttgatg
tccgaaattcggtcaattagtgcgtcttatgcactagtgttggaggagaatagtcgaatg
tcaaaatcaatcgagaaactaatgcaagagaatcaaattttgtcgaaacgactacgtcaa
aatggtattgatgactcgattgagcgatcggagagtctagatagttcaccaatgatccac
aaacgggcgccaacctatcaaggcattttcaagtatcgtgcagaagatgtgacaaaactg
ctacaacgacttgtcgacgatttggagccgcgagtcgccaaaacattggctccatcacta
ccagcttttattgtttttatgtgcattaggtacaccgacattgtgaacgatgacgatcaa
gttcgcaagctattgactagtttcataaatggcgtgaaaaatctaacccgaacacgtcat
gacaaacaaactacagagcatcgggtcatgtggctagtcaatatgatcaagttattgaac
ctcttgaagcaatacggtggattggaggaacacatgaagctgaacactccaatgcaaaat
gagcagcaattgaaaaattttgatctatccgaatacagacaggtgattctcaccacaatc
attgtatcgtatcaacaaatcacccaacaaattcaagaggtcatcaaattgcacattgtt
cccgctattttggactacgacgaaatggcacgcggaaaacaaaaaggcaaacgtgtttct
ggcgttttctacgagccacgatcattagtcaatcaattggatcatttttatgagctgttc
aaaatgttcggtttggatgaaattttcatcgatcaaattttcaagcaattcttctactac
atttgcgctatatcgctgaataatttgatgttgcgccgagaactatgtatgtggaaaacc
ggcatgagaatacgatataatataagttgtttggaggagtgggcgcgcaaaatgaaaatg
agtactgaaataaccgaacctctgacaccactcatacaggttgcatcgctattgcaagcg
cgaaaggaaactgaacgagatgttaaagtgattttggacatatgctcaacattgtcaact
gctcaagtaatcaagattttgaagtcgtatacgctagatgattgcgaggagccaattcgt
ccggccttcatcgaaaagttgacgactgctttaaatgagcgaccgatcaagactcctacc
gacaccttcaccatggatgaagcatatgttcatccactaaaagtggtatataagtacgat
gagacacaccttgaagagatcgatttaccgcagattttgaatttgaatcaaattctaacc
aaaatttaa
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integrated database retrieval system
