KEGG   Contarinia nasturtii (swede midge): 116348242
Entry
116348242         CDS       T08003                                 
Name
(RefSeq) protein SMG9
  KO
K18735  protein SMG9
Organism
cns  Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:cns00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cns03019]
    116348242
Messenger RNA biogenesis [BR:cns03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     116348242
SSDB
Motif
Pfam: Sigma54_activ_2
Other DBs
NCBI-GeneID: 116348242
NCBI-ProteinID: XP_031635014
LinkDB
Position
Unknown
AA seq 444 aa
MSENKRNRKSNQNKEPKRPIILAKKSEEKSSATSDKPRILLKPKDTSDQRHNNVTSTTQI
SIASRPIESGSCNIESSKSRLQSGLTPASSSSSSSTPTTAKDSKESSNTNENATTETKLP
SMKKPFLIISDHYQIQSHAQDFLIETNSDFVVVGVIGTQGSGKSFCLNLLNDDEANYDDI
AHVNRLIKGETGIFRMRNQMKEMLSNLICTEGIQMYVTKHRTILLDCSAVLCNPYKKEAI
FNELDDLKMLIFLLNVCNTVVVVEDCGFNLHLMRLLAMAESMKIDVYENVNDLHERRKHS
PNIILFKNKCQNHDFLVENKLRTNNLYRTFFQYSGLKTIPSIRSQEKKSNNEDDDMDVFY
FPWIELNEKNHYQAHPDLDIVIAAFRERVFMTPGTPFTVSNQQATVFTEKHWFHLALAVW
ESYKTSYFLRKFESLKEKEWALRV
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgtcggagaataaacggaatcgaaaatccaatcaaaataaggagccgaagcgtccaatt
attttggcgaaaaaaagtgaagaaaaatcatcggcgacatcggataaaccgcgaatttta
ctcaaaccaaaagatacatcagatcaaaggcacaacaatgttacatctaccacacaaatt
agcattgcatcgcgaccgattgaatctggttcgtgcaatattgaatcaagtaaatcaaga
ttacagtcgggactgacacctgcatcatcatcatcatcatcgtcaacaccaacaacagct
aaagacagcaaagaatcatcaaatacaaatgagaatgcgaccactgaaaccaaattgcca
tcgatgaaaaagccatttttaatcatttccgatcattatcaaattcagagtcatgcacaa
gattttctcatcgaaacgaattcggactttgttgtagttggtgtgattggaacgcaagga
agtggaaaatcattttgtttaaatttactgaacgatgatgaggcaaactatgatgacatt
gcacacgtgaatcgattgataaaaggcgaaaccggcatatttcgaatgcgaaatcaaatg
aaagaaatgctatccaatttaatttgtaccgaaggcattcaaatgtatgtaacaaaacat
cgtacaattctgctcgattgcagcgcagtactgtgcaatccatacaaaaaagaagccatt
ttcaacgaactggacgatttgaaaatgcttattttcctattgaatgtatgcaatacggtt
gtggttgtcgaagactgtggtttcaatttacatttaatgcgtttactagcgatggcggaa
agtatgaaaattgacgtttatgaaaatgttaacgatttgcatgaacgacgaaaacattcg
ccaaatataattttgttcaagaataaatgtcaaaaccatgattttcttgttgaaaataaa
ttgagaacgaacaatttgtatcgcacatttttccagtacagcggcttgaaaaccattcca
tcgattcgaagccaagagaaaaagtccaacaacgaagatgatgacatggatgtattttat
tttccgtggattgaattgaatgagaaaaaccactatcaagcacatcctgacctagatatt
gttatagctgcgtttcgtgagcgtgttttcatgacaccagggacaccgttcaccgtttca
aatcaacaagcaactgtattcactgagaaacattggtttcatttggcgttagccgtctgg
gaatcgtataaaacaagctattttctgcgaaaattcgagtcactcaaagaaaaagaatgg
gctttaagagtttaa

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