Contarinia nasturtii (swede midge): 116348255
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Entry
116348255 CDS
T08003
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116348255
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
116348255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_22
RsgA_GTPase
AAA_16
Fer4_6
AAA
AAA_29
VapE-like_dom
NACHT
nSTAND3
AAA_23
AAA_15
Fer4_21
Fer4_9
Rad17
Fer4_2
TsaE
Fer4_10
Fer4_4
NPHP3_N
AAA_24
Fer4_7
ORC-CDC6-like
Fer4_16
SRP54
AAA_7
Fer4_3
Fer4_17
AAA_19
DLIC
Fer4_8
Motif
Other DBs
NCBI-GeneID:
116348255
NCBI-ProteinID:
XP_031635030
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MSRSKGTEETDKQTRIAIVSDDKCKPKRCRQECKKSCPVVRMGKLCIEVSPNSKIASLSE
ELCIGCGICVKKCPFDAIMIINVPSNLEKQTTHRYSKNSFKLHRLPIPRPGEVLGLVGQN
GIGKSTALKILAGKQKPNLGRFSDPPDWTEILTYFRGSELQNYFTKILEDDLKALIKPQY
VDQIPKAVKGPVGDMLDRKDDRKNQTEICEMLDLTHIRDREVAALSGGELQRFAIAMVCI
QNGDIFMFDEPSSYLDVKQRLNAALTIRHMIHPSKFIIVVEHDLSVLDYLSDFICCLYGV
PGCYGVVTMPFSVREGINIFLDGFVPTENMRFRTESLTFKVSESATEEEIKRMNHYVYPT
MKKSLGKFELTVMEGQFSDSEILVLLGENGTGKTTFIRMLAGNLKPDDGSGDLPVLNISY
KPQKISPKHQGTVRQLLHDKIRDAYVHPQFIADVMKPMKIEEIIDQEVQNLSGGELQRVA
LVLCLGKPADVYLIDEPSAYLDSEQRLIAAKVIKRYILHAKKTGFVVEHDFIMATYLADR
VIVFEGTPSMNTTANSPQSLLNGMNRFLELLGITFRRDPNNFRPRINKLESVKDVDQKRA
GQYFFLEDN
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgaagtaaaggtaccgaagaaaccgataagcaaactcgtattgccatcgttagc
gatgataagtgcaaaccaaaacgatgccgtcaggaatgcaaaaaatcgtgtccagttgtc
cgtatgggcaagctgtgtatcgaagtcagtcccaattcgaaaattgccagcttatctgaa
gaactgtgtatcggttgcggtatctgtgtgaagaaatgcccattcgatgctatcatgatc
attaatgttccaagcaatttggaaaaacaaacaacccatcgttattcgaagaattcgttc
aagctacatcgtttaccaataccacggccaggtgaagttcttggattggtcggccaaaat
ggaattggtaaatcgacggcattgaaaattttggctggcaaacaaaagccaaatttagga
cgtttttcagatccaccagattggaccgaaattttaacctatttccgtggctctgaattg
caaaactatttcacaaaaattcttgaagacgatcttaaagcattgattaagccacagtat
gtcgaccaaattccgaaagctgttaaaggtccggttggagacatgcttgatcgaaaggat
gatcgaaaaaatcaaactgaaatatgtgagatgttggatttgacgcatattcgtgatcgt
gaggtggctgcgttgtcaggtggtgaattgcaacgttttgccattgcaatggtgtgcatt
caaaatggtgatattttcatgttcgacgaaccatcatcatatttggatgtaaaacagcgt
cttaatgctgccttaaccattcgccatatgattcatccatcgaaatttatcattgtggtt
gagcacgatttatccgtattggattatttgtccgattttatctgttgtttgtacggtgtc
cccggttgctatggtgttgtgactatgccattttcggtgcgtgaaggtattaacattttc
ttggatggttttgtgccaaccgaaaatatgcgtttccgtaccgaatcgttgacattcaaa
gtgagtgaatcagctaccgaagaagaaatcaaacgtatgaatcactatgtatatccaacg
atgaaaaagagcttaggtaaattcgaattgacggttatggaaggtcagttcagtgattcg
gaaattttggtattgctcggtgaaaatggtacgggcaaaacgacatttattcgtatgctt
gctggaaatttgaaaccagacgatggctctggtgatttaccggttttgaatatttcatat
aaaccacagaaaatttcaccaaaacatcaaggcaccgttcgacaattgttgcatgacaaa
attcgtgatgcatatgtgcatccgcaatttatagccgatgttatgaaaccaatgaaaatc
gaagagatcatagaccaagaagtacaaaatctatccggtggagaattgcaacgtgttgct
ctagtattgtgcttgggcaaaccggccgatgtctatttgatcgatgaaccgtcggcgtat
cttgactcagaacaacgtttgatcgctgctaaagtcattaagagatatattttgcatgcc
aagaaaactggttttgtggtagagcacgatttcatcatggccacatatttggctgatcgt
gtcattgtattcgaaggtacaccatcaatgaacacaaccgcaaatagtccacaatcgttg
ctgaacggtatgaatcgtttcttggaattacttggcattacattccgtcgtgatccaaac
aacttccggccacgtatcaacaaactcgaatcggtgaaagacgttgaccagaaacgggct
ggccaatatttcttcttggaagataactaa
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