Contarinia nasturtii (swede midge): 116348357
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Entry
116348357 CDS
T08003
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116348357
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cns01007
]
116348357
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cns03016
]
116348357
Enzymes [BR:
cns01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
116348357
Amino acid related enzymes [BR:
cns01007
]
Aminoacyl-tRNA synthetase
Class II (U)
116348357
Transfer RNA biogenesis [BR:
cns03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116348357
Prokaryotic type
116348357
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
116348357
NCBI-ProteinID:
XP_031635196
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MPTINIKRDLLFEALGKTYTDDEFQTLCFAFGLELDEVTTEKQMLTKEQGAVEATESASE
EIIYRIDIPANRYDLLCLEGLVSALLVFQGTKQPERYLRVDPPAGKAAEKLIILGDTAKI
RPFAVAAVLRDVTLNKNAYDSFIELQDKLHQNICRKRKLVAMGTHDLDTIEGPFYYNAKP
PTDIKFIPLNQTKEMNGVELMECYSTHAQLKHYLPIIRDSPVYPVIYDSKDRVLSLPPII
NGDHSKISVNTKNIFIECTATDLTKAKVVLDTLVSIFSVYCAKPGHVEYCEVVNSNGETI
VYPELEYRMETILPEATNKYIGIQLTPEEIANNLTRMCLKSTLKADDKLEVEIPPTRHDV
IHACDIYEDVAISYGFNNINRTLPSFMHFGRQYPLNKLTEQLREQVAQAGFTEALTFSLC
SREDISTKLGKKIEDIPAVHISNPKTLEFQVARTCLLSGVLKTVAANKRMPLPLKMFEIS
DVVLADETTEVGARNERRLVAVNCNKSAGFEVVHGLLDRVMQLLEVPWKGENGYVLDATE
DPAYFPGRCANIKYKGVNIGKIGVLHPNVLQAYELTNPCSVFEINIEPFV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaattaacataaaacgagatttattatttgaggcattgggtaaaacttatacc
gacgatgagtttcaaactttgtgctttgcttttggcctggaattggacgaagtgacgacg
gaaaagcaaatgctgacgaaagaacaaggtgcagttgaagcaaccgaatcagcatccgaa
gagataatttatcgtattgatattccggcaaatcgatatgatttattgtgtttggaaggt
cttgtatccgctttactggtgttccaaggtacaaaacagccagaacgttatttacgtgtc
gatccaccggctggcaaggcggcagaaaaattaatcattcttggcgatacggcaaaaatt
cgtccatttgctgtggcagcagttttgcgtgatgtcactcttaataagaatgcatacgat
agtttcattgaacttcaagataaattgcatcaaaacatatgccgtaaaagaaaactggtc
gcaatgggaacccatgatttggataccatcgaaggtccgttttattataacgcaaaacca
ccgaccgatataaaattcattccgttgaatcaaacaaaagagatgaatggcgttgaatta
atggaatgctattcaacgcacgcacaattgaaacattatttgccaatcattcgtgattca
ccagtgtatccggtgatttatgattcaaaagaccgagttttatcattaccaccaattatc
aatggtgatcactcgaagatctcagtcaatacgaaaaatattttcatcgaatgtacggcc
accgatttgacaaaagcaaaggtagtcttggacacattagtctcaattttttcggtgtat
tgcgcaaaacccggccacgttgagtattgtgaagttgtcaattcaaatggtgaaacaatt
gtttatccagagcttgaatatcgtatggaaacgattctaccagaagcgaccaacaaatat
atcggtattcaattgacaccggaagaaattgccaataatttgacgagaatgtgcttgaaa
tcgacacttaaggccgatgacaaattggaagtggaaattccaccaacacgtcatgatgtc
atccatgcatgcgatatatacgaagatgttgccattagttacggattcaataatatcaac
cgaacactgccatcattcatgcactttggacgtcaatatccgttgaataaattgaccgaa
caattgcgtgaacaagttgctcaggccggttttaccgaagcgcttaccttttcactttgt
tcgcgcgaagacatttcaacgaaacttggcaagaaaattgaagacatcccagctgtacac
atttccaatccgaaaacgcttgaattccaagtggcacgtacatgcctattgtcgggtgtt
ctaaaaacagttgcggccaataaaagaatgccattgccattgaagatgtttgaaatctca
gatgtcgttcttgctgatgaaacaactgaagttggagcgagaaatgaaagacgacttgtt
gctgttaactgcaacaaatcagccggttttgaagttgtacacggactattggatcgggtt
atgcagttacttgaggttccatggaaaggtgaaaatggatatgttttagatgctacagaa
gatccagcctatttccccggaagatgtgccaatatcaaatacaaaggtgttaatattgga
aaaattggcgttcttcatccaaacgttttacaagcatatgaactgaccaatccatgcagt
gttttcgaaattaatatcgaaccattcgtctaa
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