Contarinia nasturtii (swede midge): 116348594
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Entry
116348594 CDS
T08003
Name
(RefSeq) regulator of nonsense transcripts 1 homolog
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116348594
03036 Chromosome and associated proteins [BR:
cns03036
]
116348594
Enzymes [BR:
cns01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
116348594
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
116348594
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
116348594
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
UvrD_C
Motif
Other DBs
NCBI-GeneID:
116348594
NCBI-ProteinID:
XP_031635504
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
TLENIMQDMTLCENSQSDNKHDSKIEKLPSIFLVSHSNENTSKDPSNELSENHDNQSISM
TSSNIVGLTSQKNDETSKCSPTKDIVQIFSNEKEKSLVEIKSTIKSSGTTAMDYTASNEI
KISEGLPDEIMSPAWSPVETTSTKLNSKTEKQHPAKRKQTRLDGISLGISTRPAKLAAKC
AISSSMETLQPTNLQSTNEALRPINWRIPKLNHNTTPKIDQITTTLATNDLSVPFGKYDY
DVPKEIELNVEKDVRSTESTYFSGFTNLIHLEEIAHIEELEYFNLKTVTLRVDGLYEDTL
FVDFTSTFVDRYEFRVLICTLATTDFLATSRNQDRDFNPKHFSHLFIDEAACMQEPLSFI
PIAGLCSTYQNIHCKIILSGDPKQLDTVIKAQIASNMGLKRSWMENLLQKPIYQHHNGEF
NYNCIVQLTKNYRSHPHILHLANDLYYDNKLEPFAGKENCNMFIGTEILPNQDFPVIFHN
VQGICKYINNSAFNLKEIDLVMYYIDKLADGVWNGEQIQQEDIGVISPYKQQFNAIKAQC
ESKGYSRILIGSAESFQGQEKSVIIISIARTSGKFEFVADPKRVNVMVTRAKCFLIIIGD
LTYLDNDKDWNKILNYCKDNQCLIGMKHPRILPPY
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
acattggaaaatatcatgcaagatatgacgttatgcgaaaatagtcaatctgacaataaa
cacgatagcaaaattgaaaaacttccatccatatttttagtgtctcattcaaatgaaaat
acatcgaaagatccatccaatgaattgagcgaaaatcatgataatcaatccatttccatg
acatcatccaatattgtgggacttacaagtcagaaaaatgatgaaacatcgaaatgttct
ccaacaaaggacatcgttcaaatattttcaaatgaaaaagaaaaatcgctagttgaaatt
aaatcgaccataaaatcaagtggaaccacggcaatggactatacggcaagcaacgaaata
aaaatatctgaaggattacccgacgaaattatgtcgccggcatggtcaccagttgaaacg
acatcaactaaactaaattcaaaaacagaaaaacagcatccagcaaaacgtaaacagact
agattggatgggataagcctagggataagcacacgacctgccaaactggctgccaaatgt
gcaatatcatcttcaatggagactttgcaaccaactaacttgcaatcaacgaatgaagca
cttcggcccattaactggcgaattccaaaattaaaccacaatacaacgcccaaaatcgat
cagatcacaacgaccctagcaaccaatgatctgagcgtaccttttggaaaatatgactac
gatgttccgaaagaaatagaattgaatgtcgaaaaagatgtccggtcgacagagtccact
tacttttctggttttactaatctcattcatctggaagaaatagcccatattgaagagctt
gaatatttcaaccttaagacagttacattgagagtggatggactatatgaggatacactg
tttgttgattttactagcacatttgttgatagatatgagtttcgagtgctaatttgcact
ttagcaacaactgatttcttagcaacatcacgtaatcaagatcgcgatttcaatccaaag
catttttcacatttatttatagacgaagctgcatgtatgcaggaaccattgtcgtttatc
ccaatcgcaggcttatgttcaacatatcaaaatattcattgcaaaatcattctatctggc
gatcccaagcagctggatactgtaataaaagcacaaatcgccagcaatatgggattaaag
agatcgtggatggaaaacttgttacaaaaacctatttaccaacaccacaatggtgaattt
aattacaattgtatagtacaactcacaaaaaattatagatctcatccgcatatcttacat
ttggcgaacgatttatactacgacaacaaattggaaccatttgctggaaaagaaaattgc
aatatgtttattggaactgaaatactgccgaaccaagactttcctgtgatatttcacaac
gtccaaggaatttgtaaatacattaacaacagcgcgttcaatttgaaagaaattgatcta
gttatgtattatatcgataaactggcggatggtgtatggaatggcgaacaaattcaacaa
gaagacataggagtaatatctccatataagcaacaattcaacgctattaaagcccaatgc
gaatcaaaagggtatagccgcattcttattggatctgctgaaagttttcaaggacaggaa
aaatcggttattataatttcaattgctcgaactagcgggaaatttgaattcgtcgctgat
cctaaaagagtcaatgtcatggtaacacgggccaaatgttttctaataattattggggat
cttacctacctagacaacgacaaagattggaataaaattttgaattactgtaaggataac
caatgcttgattggaatgaagcatcctcgaatattaccaccatactag
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