Contarinia nasturtii (swede midge): 116348721
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Entry
116348721 CDS
T08003
Name
(RefSeq) protein fem-1 homolog CG6966
KO
K25805
protein fem-1 homolog A/C
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cns04121
]
116348721
Ubiquitin system [BR:
cns04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
116348721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Ank_KRIT1
TPR_12
TPR_NPHP3
TPR_10
TPR_2
DUF802
Motif
Other DBs
NCBI-GeneID:
116348721
NCBI-ProteinID:
XP_031635658
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MLDGAMVDQKIFVYNAARDNNLAALKRYLHGRTPEDVKLLVSAKTTGATPLVIAARNGHY
DIVHYLLTHTNADVEETGSVMFDGETIEGAPPLWCAAAAGYLKIVKLLVNKGARVNSTTR
TNSTPLRAACFDGHYDIVKYLVKNKADIEVANRHGHTCLMIACYKGHYRIAEYLLKLNAD
VNRRSVKGNTALHDCAESGSLDILRLLLAKGAAMDVDHYGMTPLLAASVTGHLPIVEHLI
SLDFVSREDRIAALELIGATFVDKKRDMVSALAMWRRAMEERYMQEPYLPKPISRIQVPA
YDNAVEVTDIDALDELVMDPDAMRMQALLVRERILGPAHPDTSYYIRYRGAIYADTGRFD
RCIELWTYALTMQQQVLESLNPMTQSSLLSFAELFSFMLGEAGRPVTRGRVVPPIEACDM
LTVFDKAIKEVELGQRMLNKIPEAQQDPLAICRALVSALHLACLLARLLDDEDCEPVIKK
QVLKALHDLVSLKIVIRSGRTALHLACYREAALVGRYPACQFPSPQLVKALLAVGADPNV
KDEAGNTALHLAALARPCPPTLVQTLVEHGAHLDTRNHDGDTFETLLHDQKLHELVNPVK
YTRLTCLAARTIQKYGIQYKDEVPRSLHEFIDSH
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacggtgcaatggtggatcaaaaaatatttgtttataacgctgccagagacaat
aatttggctgcattaaaaagatatttgcatggaagaacgccggaagatgtgaagctattg
gtctcggcaaaaacaacaggtgcgacacctttggtaattgcagctcgaaatggccactat
gatatcgtacactatttactaacacacacaaatgccgatgttgaagaaaccggttcggtg
atgttcgatggcgaaacaattgaaggagctccaccactgtggtgtgcagccgctgcagga
tatttaaaaatagtaaaattattggtgaacaaaggtgccagagtcaacagtacaacacgt
acaaattcaacgccgttacgtgcagcctgtttcgatggacactatgacattgtcaaatac
ttagtaaaaaacaaagccgatattgaagtagccaatcgacatggtcacacctgcctgatg
attgcttgctataagggacactatcgcattgccgaatatttactcaagctaaatgcagat
gtgaatcgacgtagtgttaaagggaatacagccttgcatgattgtgccgaatccggttca
ttggatattcttcgtctcttgttggcaaaaggtgctgcaatggatgttgatcactatggc
atgaccccgttgttagcagcctcagtaaccggccatcttccaattgtggagcatttaatt
agcttagattttgtgtcgcgcgaagaccgtattgctgcattggaattgattggagcgaca
tttgtagacaaaaaacgtgatatggtttcagcattggcaatgtggagacgcgccatggaa
gaacgttatatgcaagaaccatatttaccaaagcccatttcaagaattcaagtgccagca
tatgacaatgccgttgaagtgaccgacatagatgcgctggacgaattggttatggatccg
gacgcaatgcgaatgcaggcacttttagttcgtgaacgaattttgggacccgcacatcca
gacacaagctattacattcgttatcgaggcgctatttacgctgatactggacgatttgat
cgttgtattgaactatggacatacgcattgacaatgcaacagcaagtgctcgaatcgctt
aatccaatgacacaatcatctcttctcagtttcgcggaactcttcagctttatgttgggc
gaagctgggcgacctgtcacacgtggacgtgtggtaccaccgatagaggcctgtgacatg
cttactgtatttgataaggcaattaaagaagtcgaactaggtcaaagaatgctcaacaaa
attccagaagcacaacaagacccactagctatatgcagagcattggtgagcgcattgcat
ttggcttgtttgcttgcacgacttttagacgatgaagactgtgaacctgtgatcaagaaa
caagtattaaaagcgctccatgatttagttagtttgaaaattgtgatcagatcaggacgt
actgcattacacttagcatgttatcgagaggcagctttagttggccgttatccagcctgt
caattcccatcaccacaattagttaaggccttgttagcagttggtgctgatccaaatgtt
aaagatgaagcaggaaatacagctttacatcttgctgcattggcccggccttgcccaccc
accctcgtacagacattagtcgaacacggagcgcatttagatactcgaaatcatgacggt
gatacctttgaaacgttattacatgatcagaaattgcacgagctcgtgaatccagtcaaa
tatacccgcttaacatgtttagctgcccgcacaattcaaaaatatggcatccaatacaaa
gatgaagttccacgaagtttgcacgaatttatcgactcacattaa
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