Contarinia nasturtii (swede midge): 116348917
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Entry
116348917 CDS
T08003
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116348917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cns03021
]
116348917
03036 Chromosome and associated proteins [BR:
cns03036
]
116348917
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116348917
Coactivators
SAGA/TFTC/STAGA complex
116348917
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116348917
STAGA complex
116348917
TFTC complex
116348917
SAGA complex
116348917
SLIK complex
116348917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Ribophorin_II
Motif
Other DBs
NCBI-GeneID:
116348917
NCBI-ProteinID:
XP_031635986
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MSGLYGTTLSVESIKVIAESIGLNALPDDAAKELADDVSFKLKQIVQDSAKFMHHAKRQK
LLISDIDHSLKVRNIEPQYGFVSHDFIPFRFASGGGRELHFIEEKELDLNDVIQAQPPKV
PLEVSLRAHWLCVDGIQPTIPENPPPLTRDNQLQDTVNPVKKLDTNVKKDVTGKPTIGKL
QKFKNSETVHVKQLATHELSVEQQLYYKEITEACVGSDQARRDEALQSLSADPGLHEMLP
RMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNPSLYLEKYLHELIPSVASCIVSRTL
CMRPELDNHWALRDFASRLMATISKNFNTSTNNLQTRITRLFSNALQNDKTQLSSLYGAI
AGLAELGSEVIKVIIVPRLKSISDRIEPHLNGTGASNTDKIAAGHIRAMLQKLCAPVLKS
IRNPPDVVDEYKRDYGFLGITLQQAVLKSRNAPPPPPSTSSEKTYTTSIPQTTTTTTVIN
PITPSVSHVPSVRQQTTPRIAGTPSTKTIVPQRQLSTGSTLPSPQTLSNPSLPQKFVIVK
PGINIQQQAKPNIVVMNPPGSTNAQVIAPKQFVANDVQNTSYVIQETPEIDDLSHLE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtttatacggaacaacattatcggttgaatcgataaaagtaatagctgaaagc
attggtttgaatgcgcttcccgacgatgcggccaaagagctcgctgacgatgtttcattc
aaattaaaacaaattgtccaagatagcgcaaaatttatgcatcacgcgaagcgccaaaag
ttattaatatccgatattgatcattcgttgaaagtgcgtaacattgaaccgcaatacggt
tttgtatcacatgattttataccatttcgttttgcatcgggtggcggtcgtgagttgcat
ttcatcgaagaaaaagaattggacttgaatgatgttattcaggcacagcctccaaaagtt
ccgttggaagtatcgttaagggcgcattggctttgtgtggatggcattcagccgacaata
cctgaaaacccaccaccattaacacgagacaatcagctacaagatacggtaaatccagtt
aaaaaactcgatacaaatgtgaaaaaagatgttaccggcaaaccgacaatcggaaaacta
caaaaattcaaaaattccgaaactgtacatgtcaaacaattggcgacacacgaattatct
gtcgagcaacaactttattacaaggagataaccgaagcctgtgttggctctgaccaagct
cgacgagacgaggcattacagtcattgtctgctgatccaggtttacatgaaatgttgccg
agaatgtgtacatttattgctgaaggtgttaaagtgaatgtggtacaaaataatttggcg
ctattgatttaccttatgcgaatggtgaaagcacttttggataacccatctctttatttg
gagaagtatttacatgaattgattccgtcggtggcatcatgtatagtttcgcgaactctg
tgcatgagacccgaattggacaatcattgggcattgagagattttgcatcgagacttatg
gcaaccatatcaaagaattttaacacatcgacaaataatttgcaaacgcgtataacaaga
ctgtttagcaatgcactgcaaaacgataaaacccaattgtcgtcgttgtacggagcgatt
gctggcctggccgaacttggcagcgaggtgattaaagtgatcattgtgccccgcttaaag
tctatttcggataggattgagccgcatttgaatggaacaggagctagtaatactgataaa
attgcggccggccatataagagctatgcttcagaaattgtgtgcaccagttttgaaatcc
attagaaatccaccagacgttgtggacgaatacaagcgagactacggatttcttggaatt
acactacaacaagcggtcttaaaatcgcgaaatgcaccgccgccaccaccaagcacatct
agtgagaaaacttatactacgagcattcctcaaactacaaccacaactacagtcataaat
ccaataacaccttcagtgtctcacgtaccttcagtacgacaacaaactacaccgcgcatc
gcaggtactccaagtacaaaaacaattgtaccccagagacagctatcaacagggtctaca
ctgccatcgccacaaacattaagtaacccatcacttccgcaaaaattcgttattgtaaag
cccggcattaacatacagcaacaagccaagccaaacatcgttgtcatgaatccacctggt
tctaccaacgcacaagtaatagctccaaaacagtttgttgcgaatgatgttcaaaatact
tcgtatgtaatacaagagactccagaaatagatgacctttcgcatttggagtag
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integrated database retrieval system
