Contarinia nasturtii (swede midge): 116349051
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Entry
116349051 CDS
T08003
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cns03041
]
116349051
Enzymes [BR:
cns01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116349051
Spliceosome [BR:
cns03041
]
Complex C
Other components
Complex C specific factors
116349051
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
AAA_22
HA2_N
DEAD
ABC_tran
T2SSE
nSTAND3
AAA_7
AAA_30
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-GeneID:
116349051
NCBI-ProteinID:
XP_031636164
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MLSEYKPIFLNLEDDDSFASERDSKPTDDSVTTFVFNAHHSLAIEAQRDRLPIRKYRDQI
LYCLEQYQTLVLVGETGSGKSTQVPQYLYELGWHTKGIIGITQPRRVSAMTVADRVANER
GEVLGDTVGVSVSFIDKYSESTQIKFMTEGILLREMLADPLLQKYGVIMIDEAHERSLLT
DTVLGLLKKIMRKRESLKVIISSATIDAQFFKKFFTIESKENSAVILSVEGKMYPVDCFF
LNEPCADYVKETVATVLKIHEKEANKVGDILAFLTGQEEVLDVVQLLNEHTQQWTNNNLQ
VLPMYGTLPNADQLKVFFSAPKGTRKAIIATNIAETSVTIPGVSYVIDCGFVKMKWFDSN
SNTDTLAVIPISKAQAEQRAGRSGRMNTGKVFRLYTEEEYSKLPAQLPPEMKRSDLSTTI
LYLKALGIDNVLRFDFPTKPPAKNLLAALELLLALEALDNKGTLTQPVGYFLAELPISPM
MGKMLYNSIQMACSEEILSIIAMLQVHTVFSKPSTGQGQITARVKKREFEVAEGDLITLL
NVYTGFVAAGRTKEWCGQHYVIYKNLKRAYELREQLAKLCRNKIGMPLISCHGNVDVIRR
CITSGFFPNAAYLHHSGVYRTCRGNREMEIHPLSCLYTIRQPQYIVFCELLHTTKPFMKE
VTVIEGDWLTELAPHYYVKRGVRYEDR
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtgaatataaaccgatatttctaaatttggaagatgacgactcatttgcgtcg
gaacgtgattcaaaaccaaccgatgacagtgtaacaacttttgtgttcaacgcacaccat
tcattggccatcgaagcgcaacgtgatcgtcttccgattcgcaagtatcgagatcaaatt
ctatactgtttggaacagtatcaaacattggtgttggttggagaaactggcagcggtaaa
tcgactcaagtaccccagtatctgtacgagttgggatggcacacgaaaggaattatcggg
ataacacaacccaggcgtgtgtccgcgatgacagtggccgatcgcgttgcaaacgaacgt
ggcgaggtgcttggtgacactgtcggtgtaagtgtgagtttcatcgacaaatacagcgag
agtacgcagattaagtttatgaccgaaggaattctgctacgtgagatgctggctgatcca
ttgctacaaaagtacggtgtaataatgattgacgaagctcacgaacgtagtcttttaacc
gatacggtgttgggccttctgaagaaaatcatgagaaagcgtgaatcgttgaaagtcatc
atctcatcggctacgattgatgcgcaatttttcaagaaattttttactatcgaatctaag
gagaattccgctgtcattttgtccgtcgaaggaaagatgtatcccgttgattgtttcttt
ctgaatgaaccgtgtgccgattacgttaaagaaactgtagcaaccgtgttgaaaatacac
gaaaaagaagcaaataaagtgggagacattttggcatttttgactgggcaagaggaagtt
ttggacgttgtacaattgctgaatgaacatacacagcaatggaccaataacaatctacaa
gtgttgcccatgtatggaacattgccaaatgcagatcaattgaaagtgttcttttcggcg
ccaaagggaacacgcaaagcaatcattgccacaaatatagcggagacatctgtaaccata
ccaggggtctcgtatgtaattgattgtggatttgtaaagatgaaatggtttgattcaaac
agcaacaccgatacactggctgttattccgatttcaaaagcacaagccgaacaacgcgct
ggacgttcaggtcgaatgaatacgggaaaagtgtttcgtttgtacaccgaagaagaatat
tcaaaacttcccgcacaactaccacctgaaatgaaacgatccgatttgtccacaacgatt
ctatatcttaaagcacttggcattgacaatgttttgcgttttgattttccaacgaagcct
ccggccaaaaatttactggccgcactggaactgctcttggcgttagaggctctggataat
aaaggaacgctgacccaacccgtcggttatttcttggccgagcttccaatcagtccgatg
atgggaaaaatgctatacaattccattcaaatggcgtgctccgaagagattttaagtata
attgcaatgcttcaagtgcacacggtattttctaagccatcaacaggtcaaggtcaaata
acagcgcgggttaaaaagagagagtttgaagtggccgagggtgatctcatcacattgctt
aatgtttacacaggctttgtggccgcgggccgaacaaaagaatggtgcggtcaacattat
gtcatttacaagaacttgaaaagagcctatgagctgcgcgaacaattggctaaattgtgt
cgaaataaaattggcatgccactgatctcttgccatggaaatgtggatgtcattcggcga
tgcattacaagcggattctttccaaatgcagcgtatcttcaccattccggcgtttatcgt
acatgcagaggaaatcgtgaaatggaaattcatccgctatcgtgtctgtacaccattcga
caaccacagtacattgttttttgtgagctgctccacacgacaaagccattcatgaaggaa
gtgactgtgattgaaggggactggctgactgaattggcaccacactactatgttaaacgt
ggtgttcgatatgaagatcgttag
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