Contarinia nasturtii (swede midge): 116349074
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Entry
116349074 CDS
T08003
Name
(RefSeq) putative transcription factor capicua isoform X1
KO
K20225
capicua transcriptional repressor
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04013
MAPK signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
116349074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cns03000
]
116349074
Transcription factors [BR:
cns03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116349074
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
116349074
NCBI-ProteinID:
XP_031636189
LinkDB
All DBs
Position
Unknown
AA seq
2034 aa
AA seq
DB search
MKLFMHDEVKSHNTASQIQINSMNPEKLLSQHLQSSSQIISSNASATIATSYNSDGTAFG
DNRNTTTTISNITVTLSPNQSISSAMNATSMQSGAVTTTSTVSAMTVMAGCSNNGGGGNV
SENKCANTTSNACQPRQHPKKRKFNIADLEELDQTVHSNSHNSNNNNNNTINTNKNNGNQ
NGMDGNFGNGGGGGNGGVSVSISVPITNSAPIHSDITDKTNNNVNLSISNDNGLRTSNAI
IVNVGTMPQTITHPNEHAMVVSSNSHLNSVVSTAIVHEMKGSHSQFSQNSRKTDNGPTKT
DNGSLMITVHNEYPVIASHDHTTSINSSNVTPNIHHRSPRSNETLKYGVQSSSIIRIAGP
ATLAGAGIATVQQSLPPPPHASAITTTANEQSQLDLSEWCNHRVLARQEDIYVAGIIRSV
DPSNTILVEFDYPEGTQQSYYDVLGSGRFDIISDASPSVGDIELGTRVVCLQTNRQGHTT
FIEGEIRQILNDTKQFIVRSIASDEAKTVKRAQIRLLRPPWWDELNDNDTNNLGDTASTA
RAISGQIKSLHAMEPSNMYQNTLAGAVAAAASSNTLNPNGAINATKYVPVHHILPTIQTN
EEHYRTASTSPFTLSNSISVDAVQNVSNLHQINESQIPQIIVSQQTTNTPILTTAPIAAT
LDRGITVTEAEMRRSHQRYCDDESDDELKREDISFPMDGEKVLSGSSKRSSVQSRGSTSS
LVDNRLTPRSHAATPRSQAATPHKFNKGDVVQSETGVRKKFNGKQWRRLCSNPQCTKESQ
RRGYCSRHLNQRGNTLRSSTGPSFPSRSSSNTQADEDTSRESETSPNYRVTGRFDQEETD
VANMLVSLSSSRSATPSFSSPTNHVSSPLNANQSPVTVGNRQNLFMPIGSPAAQQPQQQY
STTPSPISYSLNSSQVIRPESLRPQIVTQSHHSQHYQQQQQVAQIAAPPQINATTRNIIS
TGQIKAPQAHVTANLNSTPNAHTTSVIRISPASSASSITNNTVHTAYQPFHPEHVPIVTN
SGAVILTTATIPYNNGNGATEHATIPKNGINSGSVHHWTTLLPIIDAPNKNQKATTITTS
HVKPESANVPVSHEDGDDDQGDDDVFEQPTPNDTNHLSSRQASANFHYPHQSQHYQPPSN
IDVDRRNNLNTDERMDTSETNFSPQVMTSMNNVNNMPANSMITHSNGNNSDGSSDATNNS
GSNQIIVGNVMIPNSPVILKSSNETMAAAKRRTQSCGALHQGVNGPPSAKEPQSPATKQK
EPKIRRPMNAFMIFSKRHRAMVHQKHPNQDNRTVSKILGEWWYALKPEEKNRYHELASEV
KEAHFRTYPEWKWCSKDRRKSSSSGKDGRGRTDSIDGMDEISPTTPLDPYHGVDLLPVSS
LALPSNHDDNDAAMDTSEPHTFAIPVSTSGPIVNTVHIKSITEASNEPQDESMSDDEQMV
IAEEEAPSAKESHDIDLKCAEKVTDSDNEENTDASESKVKKEPSSETQQQDGNGARDFTC
KPKAIKAQRQNIDSPLNYQQVPMYLNAYSPKNPSGILPFQPTGGAFKTMPISPKDTKPIV
TAGGVVVSEIENQGEVKPSPPTVFTFSNASLASGGDIKQEVVDSKSDVKPNIQLSKETTA
GIVTLTSTTGSTANRDINDDNGKNNNQQVLSNRNLPATPKSMTEPQQGAETYSSTIVRQE
NENAMDEEPTGDDEKTEYEYSEDYDDSTSADNQQRFILAPTPAQLGRAPLQRRLGSLVGG
DANCQSQIVSNEATLPNTQQIIPTATSVPSALPTPNSAAMDDSQQLSPGMQKKTLFKKVK
GEDLNNVLRQVDFEKKFQTLPRFKPEDCQSPSAISVPSSPRVFSQNYRKKTQPQHQPPHS
AKSFYEEEQQQPNSAISTATPPAVVGNRFFGPDFNIEQVKDLNTNEDRSPRTPIGSANNP
APRSSQDSAAEKGHRKTLEQRRQLVMELFNTSGMFPSSKDTTEFQIKHSDIFPNKQSLQL
KIREVRQKSMSQSGFTPGPTTPSESSIVTATSTTLSTTNAIDDQQIQKQQNQQQ
NT seq
6105 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtttatgcacgatgaagtcaagtcgcataacacagccagtcaaatacaaata
aactcaatgaacccagaaaaattattatcacaacatttacaatcatcatcacaaattata
tcatccaatgcaagtgcaacaatagccacatcgtacaatagcgatggcacagcgtttggc
gataatagaaatacaacaactacgatctcgaatattactgtaacactgagtccaaatcaa
tcgatctcaagtgcaatgaatgcaacatcaatgcaaagcggtgcggtgacaacgacatca
acggtatcagcgatgacggtgatggccggttgtagtaataatggcggcggcggcaatgtc
agtgaaaataaatgtgcgaatacaacttcaaatgcatgtcaaccgcgtcaacatccaaaa
aagcgaaaatttaatatcgccgatttggaagaattagatcaaacagtgcattcgaacagt
cacaatagtaataataataataacaacacgattaatacgaataagaacaatggcaatcaa
aatgggatggatggaaatttcggtaatggcggcggcggaggtaatggaggcgtcagtgtc
agtatatccgtgccaatcacaaattcagcgcctatacatagtgatattacggataaaaca
aataacaatgtgaacttgtcaatttcgaatgataacggtttgagaacaagcaacgcgatc
attgtaaatgtcggcacaatgccacaaacaataacacacccaaatgagcatgcgatggtt
gtttcatcgaattctcatttaaattcagtcgtttcgacagcaattgtacacgaaatgaaa
ggatctcatagtcaatttagtcaaaatagtcgcaagaccgacaatggcccaacgaaaact
gataacggttcattaatgataacagtgcataatgagtatccagtcattgcatcacatgac
catacaacgtctataaattcatcaaatgtcacaccgaatatacatcaccgttcgcctcgt
tcgaatgaaacactcaagtatggtgtgcaatcatcgtcgataatacgaattgctgggcca
gcaacattggccggtgctggaatagcgactgtacaacaatcattgccaccacccccgcat
gcatctgcaataacaacaactgccaacgaacaatctcaactcgatttgagtgaatggtgc
aatcaccgtgtgctcgcccgtcaagaagatatttatgttgcgggcattatacggtcggtc
gatccatcgaacacaattctggtggaattcgattatccggaaggtacacaacaatcgtac
tatgatgttttgggcagtggacgctttgatataatcagcgacgcaagcccatcggttggt
gatattgagcttggcacaagagtcgtatgccttcaaaccaatcgtcagggacacacaaca
tttattgaaggcgaaattagacaaatattaaatgatacaaaacaatttattgtgcgttcg
attgcgagtgatgaagcaaaaacggtgaaacgtgcacaaatccgtcttttgcgaccacca
tggtgggatgaactcaatgataatgatacaaataacttgggtgatacagcatcaactgct
cgagctatatccggtcaaattaaatcactgcatgccatggaaccatcaaatatgtatcag
aatacattggccggtgctgttgctgcggccgcctctagcaatacactcaatccaaatggc
gcaataaatgcaacgaaatatgtgccagttcatcatattcttccaactatacagacaaat
gaagaacattatagaaccgcatcaacgtcaccgtttacactatctaactcgatttcggtc
gatgccgtacaaaatgtctccaacttacatcaaataaatgaaagtcaaattccacagata
atcgtttcacagcaaacgaccaatacaccgattttaacgacagcaccgattgctgcaacc
ttagatcgaggtataacagtgactgaagctgaaatgcgaaggtcacaccaacgttattgc
gatgacgaaagtgatgatgagctaaaacgcgaagatattagctttccaatggacggagaa
aaagtactatccggtagtagtaaacgtagcagcgtacaaagcagagggagtacatcaagt
cttgttgacaatcgactgacaccacgatctcatgcagcaaccccacgttcacaagcagca
acaccacacaaattcaataaaggcgatgtggtacagtcggaaacgggcgttcgtaagaaa
tttaatggcaaacaatggcgtcgcttgtgttcaaatcctcaatgcacaaaagaatcacaa
cgtcgaggctattgttcacgccatttgaatcagcgtggcaataccttgagatcatcgaca
ggaccatcgtttccaagtcgctcaagtagcaatacacaagctgatgaagatacatctaga
gaatcggaaacatctccaaactatcgagtcactggtcgtttcgatcaagaagaaacagat
gtggcaaatatgctggtctcattgagcagttcacgttcggcaacgccatcattttcatcg
cccacaaatcatgtatcatcgccattgaatgcaaatcaatcgccggtaacggttggaaat
cgacaaaatctatttatgccaattggcagcccagctgctcagcaaccgcagcaacagtac
agtacgacgccgagtccgatttcgtatagtttaaattcgtcgcaggtaattcgaccagag
tcacttcgtccacaaattgtgactcaatcacatcactctcagcactatcagcagcagcag
caggtggctcaaattgcggcaccaccgcaaatcaacgcaacaacaagaaacataataagc
actggacaaattaaagcaccacaagcacatgtgacagccaatttgaattcaacgccaaat
gcccatacaacaagtgtgattcgaatttcaccagcatcgtcggcatcttccataacaaat
aatacggtgcacacagcgtatcagccctttcatccggagcacgtgccaattgtgacaaat
tcgggcgccgttattttaacaacagcaacaattccgtacaataatggaaatggagcaacc
gaacatgcaaccattccaaaaaacggaattaattcggggtcagttcatcattggacaaca
ttattgcccataattgacgccccgaataaaaatcaaaaagctacaaccatcacaacgtca
catgtgaaacccgaatcagcaaacgtgccagtatcgcatgaagatggtgatgatgatcaa
ggcgatgatgatgtgttcgagcaaccgacaccaaacgatacaaatcatttgtcatcgcgt
caagcatcggcaaattttcattatccccatcaaagccaacattatcagccaccatcaaac
atcgacgtcgatagacgaaataacttgaatacggatgaacgaatggatacatctgaaaca
aatttctcgccacaagtcatgacatcaatgaataatgtcaacaatatgccggccaattca
atgataacacattcaaacggaaataatagcgatggcagctctgatgcaacaaacaattcg
ggatcgaatcaaataattgtgggcaatgttatgataccaaacagtccggttatattgaaa
agtagcaatgaaacaatggctgctgcaaaacgtcgtacacaatcatgcggtgcattgcat
caaggtgtcaatgggccaccatcagcaaaagaaccacaaagtccggcaacaaaacaaaaa
gagccaaaaattcgtcgtccaatgaatgcgtttatgattttttcgaaaagacatcgtgcg
atggttcatcaaaagcatccgaatcaagacaatcgtaccgtgagcaaaatacttggcgaa
tggtggtatgcattgaagccagaagaaaagaatcgataccatgagctggcaagcgaagtg
aaagaggcacattttcgcacatatccagaatggaaatggtgctcaaaagatcgacgaaaa
tcatcgagctcgggcaaagatggtcgcggccgaacggattcaattgatggaatggatgaa
attagcccaactacaccgttggatccatatcatggtgtcgatttgctaccggtgagctca
ctcgcattaccatcaaatcatgatgacaacgacgcagccatggacacatctgaaccacac
acttttgcaattccagtttcaacatctggtccaattgtcaatactgttcatataaaatca
ataactgaagcgagcaatgagccacaagatgaatccatgtcggatgatgaacagatggta
attgctgaagaagaagcaccaagtgccaaggagtctcatgacatcgatttaaaatgtgcc
gaaaaagtaaccgattccgacaatgaagagaatacggatgcaagcgagagtaaagtaaag
aaggaaccatcaagtgaaacacagcaacaagatggaaatggtgctcgtgatttcacatgt
aaaccgaaagcgataaaagcacaacgacaaaacatcgatagtccactgaactatcaacag
gttccaatgtatttgaatgcatactcgccgaaaaatccgtctggaattctaccatttcaa
cctaccggcggtgcttttaaaacgatgccaataagcccaaaagatacaaaaccaatagta
acggctggcggagttgttgtatcggaaattgaaaatcaaggtgaagtaaaaccgtcaccg
cccacggtattcactttttcaaatgcgtcattagcgagcggcggtgatataaaacaagag
gtcgtcgatagtaaaagtgacgtgaaacctaatatccaattgagtaaagaaacaacagcc
ggtattgtaacattaacatcgacaactggatcaactgccaatcgagatataaacgatgat
aatggaaaaaataacaatcaacaggttttatccaaccgaaatttgccagcaactccgaaa
tcaatgacggaaccacaacaaggtgcagagacctactcgtcgacaattgtccggcaagaa
aatgaaaatgccatggatgaagaaccaactggagacgatgaaaaaactgaatacgaatac
agcgaagattatgatgattcgacgtcggcagacaatcagcaaagatttatactggcacca
acgccagcgcaattgggacgagctccattacaaagacgtttgggcagtttggttggcgga
gatgcaaattgtcaatcacaaattgttagcaatgaagccacactaccaaatacacagcaa
attattccaacggcaacgtctgtaccatccgcattgccaacgccaaattcagctgctatg
gacgattcgcaacaattatcaccagggatgcaaaagaaaacattgtttaagaaagtaaaa
ggcgaagatttaaataatgttttacggcaagtggattttgagaaaaagttccaaacgttg
ccacgtttcaagccagaagattgtcaatcgccaagtgctatatcagtgccatcttcaccg
cgtgttttttcgcaaaactatcgcaaaaaaactcaaccacaacaccagccaccacattca
gccaaatcattttatgaagaagaacaacaacaaccaaacagtgcaatatccacagccaca
ccgcctgctgtggttggtaatcgattttttggtcccgattttaatattgaacaagtcaaa
gatttgaataccaatgaggatcgttcgccgcgcacaccgattggcagtgcaaacaatcca
gcgccacgatcatcacaagattcggctgctgaaaaaggtcatcgcaaaacattggaacaa
cgtcgacaacttgttatggaacttttcaatacatctggaatgtttcctagctcaaaagac
acaaccgaattccagataaaacacagtgatatatttccgaataagcaaagtttgcagctg
aaaattcgtgaggttcgccagaagtcaatgagtcagtcaggttttacgcctggcccaaca
acgccaagtgaatcaagcatagtcacagcaacatcaaccacattatcaaccacaaatgca
atagatgatcaacaaatccaaaagcaacaaaaccaacaacaatag
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