Contarinia nasturtii (swede midge): 116349440
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Entry
116349440 CDS
T08003
Name
(RefSeq) ribonuclease Z, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cns03016
]
116349440
Enzymes [BR:
cns01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
116349440
Transfer RNA biogenesis [BR:
cns03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
116349440
Prokaryotic type
116349440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_4
Gelsolin
Motif
Other DBs
NCBI-GeneID:
116349440
NCBI-ProteinID:
XP_031636714
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MIKLNPICCKNYYVPLKLFSRHLKVARRKNYIKPPKVQKIQAHTAYLKVIGSGAPDQPAS
VVLKTTTKTYLFNCGDGIKALAQNAKVSLENINHTFFTQSKWNCIGGMTSVIFATIANSG
YLPSIHGPNNLDNIFRRMSFLSIVGSMFKNRFTPETYKSCEPFEDNDLIIEPIQLKHWNE
TAFIYLCTLKACKGTFSVSKSVLKNVPPHLVIKLHRGEDVSLDDGTIVTANEVRNPDYPE
VHFIVVDVPHKGYLKDLATNIKLESLLHESKLPNVELIIHFTPKDVFETSRYQYFIKSIN
PKRNMILNDMNTHSCMESVYKLQEKLHTIDSKIHPLLSTQLDTSHKIFDPYDCMSEQTST
FYTKYIFRKTQDDDFLRDVGEETESFLINDDSGEKPEKQFHLCTQNVPSKLENEQFPRIL
FLGTGASDSHSLRGQSAILVHLSNTDAFLLDCGSGTCSQINRFYGKEAPEIYRRLKGVYI
SHMHLDHHIGMPEVFRYRLRYLPADREPLRIFCPVEDFKSWILFYSKNVESINHDMKLID
NDVLLYDKLNFHEKVYLNIDSLKTCAVNHFKKSYALTMNFSYRNGDNVETFRLAYSGDTG
LSDDFVKLGHKADLLIHEATFQDALTDLADKSRHSTMSMALEQSKRMEAKHTILTHFSSR
YHILPYIENIDENTGIAFDYMEITPDDLPRLGSLVAQYQNAFPGDLRYLEQKTKSYLFQR
GLDTPINE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgattaaactaaatccgatttgttgtaaaaattattatgtgccattaaagttatttagt
cgtcatttgaaagtggcaaggcgtaaaaattatatcaaaccaccgaaggtacaaaaaata
caggcacatactgcttatctgaaagtaattggatcaggtgcccctgatcaaccggcctca
gtagttctcaaaacaacaactaaaacctatctctttaattgtggtgatggaataaaagcc
ttggcacaaaatgctaaagtatcattagaaaatattaatcatacattttttacacaatca
aaatggaattgtattggcggtatgacaagtgtaatttttgcaacaattgccaactctggt
tatctaccttcaattcatggaccaaataatttagataatatcttcagaaggatgtcattt
ctgtcaatcgttggtagtatgttcaaaaatcgttttacaccagaaacatataagtcatgc
gaaccatttgaagataatgatttaattatcgaaccgattcaattgaaacattggaacgaa
actgccttcatttacttatgcacattaaaagcatgcaaaggaacattttcggtaagcaaa
tcggtattgaaaaatgttccaccacatttagtaataaaattacaccgcggagaagatgtc
agtctggacgatggtactattgtaacagcaaatgaggtgagaaatccagactatccagaa
gttcatttcattgttgttgatgtaccacataaaggttatcttaaagatttggcaacgaat
atcaaattggaaagcttattacacgaatcaaaattaccaaatgttgagcttattatccat
tttacaccaaaagatgtgtttgaaacatcacgctatcaatatttcatcaaatccattaat
ccgaaaaggaacatgatcttaaacgatatgaacacacattcttgcatggaaagtgtatac
aaattacaggaaaagctacatacgatcgattcaaaaattcatcctttgctaagcacgcaa
ctggatacgagccacaaaatatttgacccatatgattgtatgagcgaacaaacatcaaca
ttttacactaaatatatatttcgcaaaacacaagatgatgattttttgagagatgttggt
gaggaaacggaatcgtttctaataaatgacgattccggtgaaaaaccggaaaaacagttt
catttgtgcacacaaaatgttccatcaaagcttgaaaatgaacaatttccgagaatctta
tttttgggcacgggtgcatccgattcacattccttgcgtggtcaatctgcaattttagtt
catttatcgaataccgacgcatttctactagattgtggctctggaacgtgttctcaaatc
aatcgattttatggcaaagaagcgccagaaatatatcggcgtttaaaaggtgtttatata
tcacatatgcatttagatcatcacattggaatgccagaagtatttcgatatcggttgcga
tatttaccagctgaccgtgaaccattacggatattctgtccggtggaggattttaaatcg
tggattttattttattccaagaacgttgaatccataaaccacgatatgaaacttatcgat
aacgatgtcttgttgtatgataaattaaactttcatgaaaaagtgtacctgaacattgat
tcgcttaaaacgtgtgcagttaatcattttaaaaaatcatacgctttaacgatgaatttt
tcatatcgtaatggagataacgtggaaacatttcggcttgcgtacagcggtgacacaggc
ctgtctgatgattttgtgaaattgggacataaagctgatcttttaatacatgaggcaact
tttcaagacgcactaacagaccttgctgataaatctagacattccaccatgtctatggca
cttgagcaaagcaaacgaatggaggctaaacacacgatactgacacattttagcagtaga
tatcatattttaccatatattgaaaatatcgatgaaaatacgggcattgcatttgactat
atggaaattacaccggacgatttgcccagacttggctctttggtcgcacaatatcaaaat
gcctttccaggagatttgagatatcttgaacagaaaaccaaaagctatctatttcaacgt
ggtttggatacaccgataaatgaatga
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