Contarinia nasturtii (swede midge): 116349443
Help
Entry
116349443 CDS
T08003
Name
(RefSeq) putative elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cns03016
]
116349443
Transfer RNA biogenesis [BR:
cns03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
116349443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
HB_ELP1
TPR_ELP1
Beta-prop_WDR19_1st
TPR_GEMI5
Beta-prop_WDR35_TULP_N
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
116349443
NCBI-ProteinID:
XP_031636716
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MKNLELLYSRTAQLDVNNVNYMNLNTENAGTTFIASNDELLSFDWSKKQINVITPLQNEI
VGFEHLSLNNELCVATAAGEVIVYNLHQSSDESVTFCEGGLKAMSWSNDQEVVVFVTQAN
SLVVMNSAYDPIAEVNLLDENFGDEAFINVGWGKKETQFHGTEGKQAAHKKPAEIAVEDV
RVLDQRISIVWRGDDEYFAISFVGKTERMFKVFDKEGKLKYTSEKLAGLDAVIDWRPTGN
WIAIPHVLPNKYTIALFEKNGLRHREIVLPFKKEEEVVEKLLWSGDSDILAIYTEHATGS
TIYLYTICNYHWYQKQTLHFNGKCKAIQWDNNYLEGKSLHVIEQSLQYSVYRWDHSIVRS
TGFTDDDQALVAVIDRNNLLLTNFRGAVIPPPMCGSTLVHSSPINYAGFIRQSTDSNRFF
IVDTTNTFSTFECTFERNPERNLNLLEGSKLIQSYKIAQGDHIPLFNQHWTWLNELHVIF
CYTKDNATVLSLSELREGQVNIVSTQSIDGIIGNIVVCNKSSKIIYQLTCGKFESIEILE
SKLQEPQFLFDVSSFCERIDCSTIHGEIKVIALKTQQNLYVDGEKVASDVTSFLLTEQFL
LFTTLDQLKFIRLDGKDVINERRIERGGRLVTSVPHDSRTVLQMPRGNLETIQPRVLSLV
IIAELLDAHSYRKAFDLLRKQRINLNLLADHNPIKFLSHIPEFIADIDNIQWLNLFLSDL
LNEDVTVTMYASNYRHLKNRTFATVYAYKVDVICEQFCNVFEQDSTVKYLLPMITAHVKR
KNLEKALEILWAVRQIELNPVDGRKTTVTAQEALKYLLYLVNVNDLYDVALGMYDFDLVL
FVAQKSQKDPKEYLPFLNELKQLEENYRKYRIDNHLKRYSKALEHIVKCGVEKLEECLEL
IEKHNLYTQALRLFKPSDECYNDIVIQYADFLRSKGAFYEATLMYERGGDSTADFKQAVL
SAKHTLDWKKCLRLARKSSYSKEETENLCRSLLPALKENNRFADAAELVRFFNPNSIEYI
QVLCDGKFYQKAILESSGLPESQDEFIRNHLFDFARKTIEKIHGDQLQFSKFVARLQTIR
KEKAEKLLNGDVDDDDCDMFSDTTSMNSSRFTGGSRGTAKSFRSSRSKRKHERKLLSLKE
GNPFEDIALIDVIYTMVLNIFAQQQHIHELLKSLVDCQLDGIGIEVQKIFNELLEDIKRS
LDVIWLPEMMVSGEIKVEEYMDYVRVQKEQHYAMIKPHQRAKPILTLIDWQLEILK
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcttgagctactttacagccgaacggctcaattagacgtgaacaatgtgaat
tacatgaatttgaatacagaaaatgctggcacaacatttattgcatcaaacgatgaattg
ttaagttttgattggtcgaaaaaacaaataaacgtaataacaccgcttcaaaatgaaatt
gttggtttcgaacatctatcgctaaacaatgaattgtgtgtggcaacagcggctggtgaa
gttattgtttataatttgcatcagtcaagtgatgagtcggtaacattttgtgaaggtggc
ttgaaggcgatgtcatggtcgaatgatcaagaggtggttgtatttgtaacacaagccaat
tcacttgttgtcatgaacagtgcatatgatccaattgctgaggtgaatctattggatgag
aatttcggcgatgaggcttttatcaatgttggatggggtaagaaagaaacacaatttcat
ggcactgaaggtaaacaagctgcacataaaaaaccagctgaaattgctgtcgaagatgtt
cgcgtactcgatcaacgtatttcgattgtgtggcgtggtgacgatgaatattttgccatt
agttttgtcggtaaaacggaacgaatgttcaaggtatttgacaaagaaggtaaattgaaa
tatacctcggaaaaattggccggtcttgatgcagtcatcgattggagaccaactggtaat
tggattgcgataccgcatgttcttccaaataaatacacaattgcattgtttgagaaaaat
ggattgagacatcgagagattgtgctgccgtttaaaaaagaagaagaggtggtcgaaaaa
ttactctggagtggcgattcagacattttggccatttacacagaacatgcaaccggttcg
acgatttatttgtacaccatttgcaactatcattggtaccaaaaacaaacattgcatttt
aatggtaaatgcaaagcgattcaatgggataacaattatttggaaggaaaatcattacat
gtgatcgaacaaagtctacagtattcagtttatcgttgggatcattcaattgtacgctca
actggcttcacagatgatgatcaagctcttgttgctgttatcgatcgtaataatctcttg
ttaacaaacttccgtggtgctgtgattcctccaccaatgtgtggatctactttggttcat
tcatcacctataaattatgccggattcatacgtcagtcaaccgattcaaatcgattcttt
atcgttgacactacgaatacattttcaacatttgaatgtacatttgagcgtaatcccgag
cgtaatcttaatttacttgagggcagcaaacttattcaaagctataaaatcgcacagggc
gaccatattccattattcaatcagcattggacttggttgaatgaattacatgtcatattt
tgttataccaaagataacgcaacagttttgtcactttctgagttgcgtgaaggacaagtc
aacatcgtaagcacacagtcaatcgatggtatcattggaaacatagttgtatgtaacaaa
agttcaaaaatcatttaccaattaacttgtggtaaatttgaatccatcgaaattttggaa
tcaaaacttcaggaaccacaattcctgtttgatgtgagcagtttctgtgaaagaatcgac
tgtagcacgatacatggtgaaataaaagtgattgcattgaaaacgcagcaaaatctttat
gtagatggagagaaagttgcttcagatgttacgtcatttttgttaaccgaacagttcctg
ctctttaccacgcttgatcaattgaaattcattcgattggatgggaaggatgtgatcaac
gaacgtcgtattgaacgaggtggtcgattggtgacatcggtaccacatgattcacgtacc
gtcttgcaaatgcctcgtggaaatttggaaacaatacaacctcgagtactttcattagtt
attattgctgaactccttgatgcacattcctatcgcaaagcctttgatttgttgcgtaaa
caacgtatcaacttaaatcttttggctgatcacaatcccattaaatttttgtctcacata
cccgaatttattgcagacattgataatattcaatggctcaatctatttttgtcggatctt
ttgaacgaagacgtcactgtcacaatgtatgccagtaactatcgacatctcaagaatcga
acatttgcaacagtatatgcatataaagtggatgtcatttgtgaacagttctgtaatgtg
tttgaacaggattcgacggtaaaatatttacttccaatgataacagcacacgttaagcga
aagaatctcgaaaaagctttggaaattctatgggccgtgcgacaaattgaactcaatcca
gttgatggtcgaaagacaacagttactgcacaagaagcattgaaatacttactgtatttg
gtcaatgtgaatgatttgtatgatgtagcattgggaatgtatgattttgatttggtacta
tttgttgcgcaaaaatcacaaaaagatccaaaagaatatttaccatttttgaatgaactg
aaacaattggaggaaaattatcgcaaatatcgaattgacaatcatctaaagagatacagt
aaagcattggaacatatcgtgaaatgtggcgttgaaaagctagaagaatgtctggagttg
attgaaaaacataatctctacacacaagcactacgactatttaaaccatctgacgaatgt
tacaatgatattgtgattcaatatgccgactttttgcgatcgaaaggcgcattctacgaa
gccactttgatgtacgaacgaggaggagattcgacggcagattttaaacaagccgtttta
tcagccaaacacacattggattggaagaaatgcttacggttggccagaaaatcttcgtat
tcgaaggaagaaacggaaaatctgtgcaggtcactattgccagctctcaaggagaacaat
agatttgctgatgcagctgaattggtgcgtttctttaatccaaatagtatcgaatacata
caagttctttgcgatggaaaattttatcaaaaagcaatcttggaatcaagtggcttaccc
gaatcacaggatgaattcattcgaaatcatttatttgactttgcacgtaaaacaattgaa
aaaatccatggcgatcaattgcaattcagcaaatttgttgctcgattgcaaacaattcgc
aaggaaaaagctgaaaaattgttgaatggcgatgtagacgatgatgactgcgatatgttt
tcagacacaacaagtatgaactcatcgcgatttacgggtggttcaagaggcacagcaaaa
tcgtttagatcgagcagaagcaaacgaaagcatgaacgaaaactactgagtttgaaagaa
ggcaatccttttgaagatattgccttgatcgatgttatttatacaatggttctcaacata
ttcgcacaacaacaacacattcatgaactccttaagtctttggtcgattgtcagttggat
ggtattggcatcgaagtccagaaaatattcaatgagctgttggaagatattaaacgatca
ttggatgtgatttggttacctgaaatgatggtatctggtgaaataaaagtcgaagaatat
atggattatgttcgagttcaaaaggaacaacactatgccatgataaaaccgcatcaaaga
gcaaaaccaatattaacactcattgactggcaattagaaattctcaaataa
DBGET
integrated database retrieval system
