Contarinia nasturtii (swede midge): 116349461
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Entry
116349461 CDS
T08003
Name
(RefSeq) uncharacterized protein LOC116349461
KO
K03440
acid-sensing ion channel, other
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cns04040
]
116349461
Ion channels [BR:
cns04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
116349461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASC
DUF4834
Motif
Other DBs
NCBI-GeneID:
116349461
NCBI-ProteinID:
XP_031636741
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MSKAARNGKDFNFHQEVEKSSKYQGIKHRMGESQDSFLTQETMTTEKGAQKKCCQWNQKT
MTITITVCIALVLSLVVLIIRFHANVRPDEKYASVGTIPFPAITICPGIRSGYPKNNFNR
TLFLMQTEAQPKLRPRKKIALETLFQLCDWDIFRRVRNWDILERFVDEDDQIEAFNSIAC
DIDENAKFCAWHRRTSCDEYFRPIITDEGRCYTFNLLNSYEIFTQSMSFPLIRNWKNSLN
ATHWNREIGYTDTETASEHYPFRVFDTDSKIYPYRVSGAGPDNALNISIYFPRDELDPLC
NRSARDIKFYLHSPDELPEREHYFHIPIGKRVSVSVKPNIIVTSNDLRSFSPWRRQCYFN
DERKLRFFKIYTQRHCEIECLANFTKTRCGCVKFSMPRDNSTRICGVAKMRCYHDAEWRL
ADNFGWQSSYLKKCNCLPACASIKYNVEIKAKGLKVNKNLIKGKLGFQTPRREDEERSQL
LISFKDEKFIPNVRIQFTVLDFLKSFYVVFFVILAIILVVVFEAILYCIFRLGRAFGGGR
KPQTREGNDRYVPETVSKAVSRGSDYDISGDNDDERRGKKERCQWCGNHIKTTIILGGLF
ILCLASGLLTHLFFYWSKYLVKVRPDDKVMSIGAIPFPAVTICPGTRAGYPPLNFTHLLR
LMQVYREPQLKLDEKYAMETLFQIYPEDIVGSVRSPEFLERFSREEYQFGIFGLISNRIT
EYTKGCKWLNDKIACNANFRPIITEEGKCFSFNLLSSYEIFTQHMASPLVRRASREDDYD
ENDRDPEAYPYRVLRKGQNNGLAISIFFDKDQLDIFSRRWVQEPKFILHSPDEMPRTTNF
FRIPMGKDVKVLVKPQMITTSEKLRNFNPKRRQCTYDSERKLRYFKTYTQHHCDMECAAN
FTYWRCGCVKFNLPRGEEMSICGAGRMQCYRDAEAELLRRSTMEECNCLPACTSTDYKVE
ISEREFDEFNRINADLNYQRRDESKVSRVTIYFKDDLFKTLRREEAFYTAEFLIEFGGLH
ILALGVILLLFMWWIVHLVERKQRNVN
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggcagcaagaaatggaaaagacttcaattttcatcaggaagttgaaaaaagc
agcaaatatcaaggaataaaacatcgaatgggtgagagtcaggactcatttttgacacaa
gaaacaatgacgacggaaaaaggtgcgcaaaaaaaatgttgtcagtggaatcaaaaaacg
atgacgataaccataaccgtatgcattgcgttggtgttgtctttggtggtgctaatcata
cgttttcatgcaaatgttcgtcccgatgaaaaatatgcgtcggttggaacaattccattc
ccggccatcacgatatgcccgggaataagaagtggctatccgaaaaataatttcaatcgc
acattatttctcatgcaaactgaagcacagcccaaattacgaccaagaaagaaaattgca
ttggaaacgctatttcaactatgcgactgggatatctttcgacgggtacggaattgggac
atactcgagcgcttcgttgatgaagacgatcaaattgaagcttttaattcgattgcatgc
gatatcgatgaaaatgcaaaattttgtgcttggcatcgacgcacctcatgcgatgaatat
tttcgaccaattatcaccgacgagggacgatgttacacatttaatcttctaaattcctac
gaaatattcacacaaagtatgtcgttcccgctgattcgcaattggaaaaacagtttgaat
gcaacgcattggaatcgagaaattggttatactgatactgaaacggcttctgaacattat
ccattccgtgttttcgatacggactcaaaaatctatccgtatcgtgtgtctggtgcggga
cccgataatgcattgaacatctcaatttattttccacgagatgaattggatcctctatgt
aatcggtcggcacgagacataaaattttatctgcattcgcccgatgaattgccagaacga
gagcattatttccatatcccaattggcaaacgagtttcagtatcggttaagccaaacatc
attgttacatcgaacgatttacgaagctttagcccatggcgacgacaatgttatttcaat
gacgaacgcaaacttcgattcttcaaaatttacacacagcgtcactgtgaaattgagtgt
ttagccaattttactaaaaccagatgcggatgtgtcaaattcagcatgccaagagataac
agtacaagaatatgcggtgtagcaaaaatgcgttgctaccatgatgccgaatggagatta
gctgacaattttggttggcaatcgtcttacttgaaaaagtgcaattgtcttcctgcatgc
gcttcgattaaatacaatgtcgaaatcaaagcgaaaggtttgaaagtaaataaaaattta
attaaaggtaaactcggttttcagactccaaggcgtgaagatgaagaaaggagtcaacta
ttaatatcattcaaggatgaaaagtttataccgaacgttcgaatacagttcacggtgtta
gattttttgaaaagcttttatgtggtctttttcgttatattggccattattctggtggta
gttttcgaggcaatattgtattgtattttccgtttgggtcgagcctttgggggaggacgt
aaaccacaaactcgtgaaggtaatgacagatatgttcccgaaaccgtatcaaaagcagtc
agccgaggaagtgattatgatataagcggtgacaacgatgatgaacgtcgcggaaagaaa
gaacgatgccaatggtgtggtaatcatataaaaacaacaattatcttaggcggtttgttt
attttatgcttggcatccggtttgttaacccacctctttttctattggtccaaatacttg
gtaaaagttcgaccagatgacaaagtgatgtctattggcgcaattccattcccggctgtg
accatttgcccaggaaccagagccggctatccaccactcaatttcacacatctacttcgt
ttgatgcaagtttatcgcgagccacaacttaaactggacgaaaaatatgccatggaaacg
ttattccaaatttatcccgaagatattgttggatcggtacgaagtcccgaatttctggag
cgattcagtcgcgaagaatatcaatttggaatttttggtttgatttcaaaccgaattacc
gaatatacgaaaggatgtaaatggctcaacgataaaattgcatgcaatgccaatttccga
cctatcattacggaagagggaaaatgtttctcatttaatctattgagttcatacgagata
tttacacaacacatggcatcgccacttgtacgacgtgccagtcgtgaagatgattacgac
gaaaatgatcgagacccagaagcatatccataccgggttttacgcaaaggacaaaacaat
ggattggccatttccattttctttgataaagatcaattggatatattctcacgacgttgg
gtacaagagccaaaattcatacttcattcacccgatgaaatgccacgcacaacaaacttc
ttccgcatcccaatgggaaaggatgttaaagttttagtcaaaccacaaatgatcaccaca
tcggaaaaattacgcaatttcaatccgaaacggagacaatgcacttacgattcggaacgg
aaattgcgctatttcaaaacatacactcaacatcactgcgacatggaatgcgccgccaat
ttcacatactggcgttgtggatgcgttaaattcaacttgccaagaggtgaagagatgagc
atttgtggtgctggcagaatgcaatgctatcgcgatgctgaagccgaattgctcagaaga
agtacaatggaagaatgcaattgtctaccagcttgtacatctactgattataaggtggag
atatctgaacgagaatttgatgaattcaatagaattaatgcagatttgaattaccaaaga
cgcgacgagagcaaagtcagccgtgttacaatttacttcaaagatgatctatttaaaaca
ttgagacgcgaggaggcgttttatacggccgaatttttgattgaatttggtggtttgcat
attttggcattgggtgttattcttctattgttcatgtggtggattgtgcatttggttgag
cgtaagcaacgaaacgtcaattaa
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integrated database retrieval system
