Contarinia nasturtii (swede midge): 116350528
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Entry
116350528 CDS
T08003
Name
(RefSeq) uncharacterized protein LOC116350528
KO
K20227
female sterile (1) M3, polehole
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04013
MAPK signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
116350528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tsr0524-like
Motif
Other DBs
NCBI-GeneID:
116350528
NCBI-ProteinID:
XP_031638196
LinkDB
All DBs
Position
Unknown
AA seq
1254 aa
AA seq
DB search
MSQNMFQFFKFVIFSSILIKYALVNSAGLDKNANNAVHQTPGADVNIHDVKLNHIAQTLT
EMKGHLTDHQVHYIEPIQRKINGLVKILDVFRLFHAGAPINGIIIANNVKIKPNKNNVIA
RIFLNGWIQSNETSISTLIERLKAANFNLRCRIVFEHQIKKRSTAETNTWSGHSLHINKL
KLIGQAEKNFKPKILNERNAVHRLHGKLSTKYLVVKHLERIANGMANWHMNGRTKRSTTL
SSLDHSKIVLNSINNIKWSEFVNTVYRKGMNTTIVGNIVFEKPAHTTFLNTAETNGIRVF
ELMTMATDQVIQSNAFIRMIFANHVNVRIFNDMRNFADNVVLLGTDAVIESRVKVNECHI
RDSLHLSDDESEHITDHIVGTHLDDLVQIYHGRVLVRGSVNTNNISVSNPDQEETIRSQI
LINGILFDLPHLSHQYWMKTVNQDIPHANFNEPITSPQATINRINGFSRTEYFILDDQID
FLPLNVDFQDVKIKGNLFTDKNSMTTLQKLNSDSIARLGNTQVIMNSSIIFKDRLLVNHM
TLQIDSKNLVRKSLNGIVSNSFLADTPIRKQFKQNLHVTNNIIPADVDFSNFTIHNYNNY
TDVSKHLNSVLIPSNKPSPWLVIVFETKCNAHSMDVQHIKHRSVPSYDIQTILQSASHTE
QHRIQKLTIEGNIQIVHENTSEAPTNPTQITQLNGLDLNKYLQLVVFKQGPQQNRHESIE
IGGEKGFMADLNIASVHTFEINKRIQTENWLESVLRQQPADTNQQIIESMGWQFNEITSD
NLQMQHSINGIGIMPSDNTTDHIIFVNHPHDRETFLTINSDISLSNNGKIGSNSDVTCTE
LRPCNVDHLQLKTVNLPQTTWDEIKIFGNVKVLSNDMNADKSIRCTKPLCYLQMSLSATT
NEIINENIDFNLLDKHDTFSFNKITSRPSPNENVLQEKDVTQINSINLVELVEDSLTRTT
VNPSKDLNQTQLTTFSTEKELLGTENVFDASKGALLSGIFSVNLINDVNVNALNNTLYLR
SKTEEMLISPWQKLVFLDSPSAQNMQIDNNQTINGVGVDDVFFAYSPVFNKNSSMLFEQN
VHGQNAQNYVNQIIADESFNTQLVNGISLEYFINNRCKLSIDRFPHSAVSHRINKPQIID
GSFTFENLVVSGNDVKIEQINDVTCDEIVLTHSTEKQQITGFKVIDGNLPFLYVEKPFHV
WKTNNHEFVSMYAKTILLNHKQSIGRLIVKQPFQIKTKTANISRNLNEATLPKD
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaatatgtttcaatttttcaaattcgtcattttttcatcgatactaatcaag
tatgcactcgtcaatagtgctgggcttgataaaaatgcgaataatgcagttcatcaaaca
cctggagctgatgtaaatattcacgatgtcaaactaaatcatattgcgcaaacattgact
gagatgaaaggtcatttaaccgatcatcaagtgcattacattgaaccgattcaacgaaaa
attaatggtttggtaaaaatcttggatgtgtttcgtctatttcatgctggagctccaata
aatggcatcatcattgcgaacaatgttaaaatcaaaccgaataaaaacaatgtcatcgca
cgcattttcttaaacggatggattcaatcaaatgaaacctcaatttcgacactgatcgaa
cgtttgaaggcggccaattttaatttaaggtgtcgcatcgtatttgaacatcaaatcaaa
aagcgatcaaccgctgaaacaaatacatggtccggacactcgttgcacattaataaatta
aaattgataggtcaagcggagaaaaatttcaaaccaaaaatattaaatgaacgcaacgcc
gttcatcgtttgcatggaaaattgtcgacgaaatatttggttgttaaacatttggagaga
atcgccaacggaatggccaactggcatatgaacggtcgcacgaaacgttcaaccacattg
tcatcattggatcattcgaaaattgttctaaattcaataaacaatattaaatggtcggaa
tttgttaatacagtgtatagaaaagggatgaacacaactattgttggaaatattgtgttt
gagaaaccagcgcacactacatttttgaatacagcagaaacaaacggcattagagtattc
gaattaatgacaatggcaacggaccaagtgatccagtcaaatgcttttattagaatgatt
tttgcaaatcatgtaaatgtacggattttcaacgatatgagaaactttgcagataatgtc
gtattattaggaaccgatgccgtcattgaatctcgagttaaagtgaatgagtgccatatt
agggacagcttgcatctgtctgatgatgaaagtgaacacataaccgatcacattgtgggc
acgcatttggatgatttagtacaaatttaccacggacgggtattagtcagaggatctgtt
aatacgaataatatctccgtttcgaacccggatcaagaagagaccattcgcagtcaaatc
ttaataaatggcatactatttgatttaccacatttaagccatcaatattggatgaaaaca
gttaatcaggatatccctcatgcaaatttcaatgaacccatcacaagtccacaggcaacg
ataaatcgcataaatggattttcaaggaccgaatatttcatactggatgatcaaattgat
tttcttccattgaatgttgattttcaagatgtcaaaatcaaagggaatttatttaccgat
aaaaattccatgaccacattacaaaaactgaattcggattcaattgcacgattgggaaat
acacaagtcataatgaattcgtcaattattttcaaagatcgtctgttggttaatcacatg
acattacaaatcgattcaaagaatttggttcgtaaatcattgaatggcatcgtatccaat
tcattcttagccgatacaccaattcgaaagcaattcaaacagaatttacatgtaacaaat
aacataattccggcagatgttgatttcagtaattttacaattcataactacaataattac
acggatgtttcgaaacatttaaattccgtattaataccatcaaataagccgtcaccctgg
ctggtcatcgtatttgaaacaaagtgcaatgcacattcaatggatgtacaacacattaaa
catcgttcagtgccttcctatgatattcagacaattttgcagagtgcatcacatacagaa
caacatcgaatccaaaaactaacaattgagggaaacattcaaattgttcatgaaaataca
agcgaagcaccaacgaatccaacacaaattacccaactgaatggacttgatttaaataaa
tatttgcaattagttgttttcaaacaaggaccacaacaaaatcggcacgaatcaatcgaa
attggtggtgagaaaggttttatggccgatttgaatattgcttcggtgcacaccttcgaa
ataaataaacgtattcaaacggaaaattggctggaatcagttttacgtcaacagccagcc
gatacaaatcaacaaataatcgaatcaatgggatggcaatttaatgaaataacatccgat
aatttacaaatgcaacattcaatcaatggcattggtattatgccaagcgataatacaacg
gatcacatcatttttgtgaatcatccacatgatcgtgagacatttttaacaattaattcg
gacatttcgctgtcaaataatggaaaaattggctcaaacagtgatgttacatgcactgaa
ctcagaccatgcaatgtcgatcatttacaattgaaaactgtaaatttgccacaaactaca
tgggatgaaattaaaattttcggaaatgttaaagttctttcgaacgatatgaatgcagat
aaatcgatacgatgtactaaaccattatgctatttacaaatgagtttatcggcaacgaca
aatgaaattattaacgagaatatcgatttcaatttgttagacaagcacgatacattttca
tttaataaaatcacatcacgaccgagtccgaatgagaatgtgttacaagagaaagatgtc
acccaaataaatagcattaatttggtggaattggttgaggattctctcacacgtacaacc
gtaaatccatcgaaagatttgaatcaaacacaattgaccacatttagtacggaaaaggag
ttgcttggcactgaaaatgtgtttgatgcatctaaaggtgcacttttatctggcattttt
tccgttaatttaattaatgatgtaaacgttaatgctctaaataatacattatatttgcga
agcaaaaccgaagaaatgctcatttcaccgtggcaaaaactcgtgttcttggattcacct
tcagcacaaaatatgcaaattgacaacaatcaaacgattaacggtgttggtgttgacgat
gtgttctttgcatatagtccagtattcaataagaattcatcgatgttatttgaacaaaat
gtccatggtcaaaatgcacagaattatgtcaatcaaattattgccgatgaaagttttaat
acacaacttgtaaatggaatatctttggaatattttataaataatcgatgtaagttatcg
atagaccgatttccacattcagcagtgtcgcatcgaataaataaaccgcagatcattgat
ggatcttttacgtttgaaaatttggtggtaagcggcaatgatgtgaaaattgaacaaatt
aatgatgttacatgcgatgagattgtgttaacacattcaacggaaaaacaacaaataacc
ggcttcaaagtaatcgatggcaatttaccatttttatatgttgaaaaaccatttcacgta
tggaaaacaaataatcatgaatttgtttcgatgtatgcaaaaacaatattgttaaatcat
aagcaatcaattggtcgactgattgtaaaacaaccattccaaatcaaaacgaaaactgca
aatatttcacgaaatttaaatgaagcaacattacccaaagattaa
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integrated database retrieval system