Contarinia nasturtii (swede midge): 116350541
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Entry
116350541 CDS
T08003
Name
(RefSeq) ATP-binding cassette sub-family A member 3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116350541
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cns02000
]
116350541
Transporters [BR:
cns02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116350541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
SMC_N
AAA_23
AAA_22
AAA_30
Zeta_toxin
AAA_15
nSTAND3
MukB
AAA_29
SRP54
AAA_14
AAA_27
Motif
Other DBs
NCBI-GeneID:
116350541
NCBI-ProteinID:
XP_031638206
LinkDB
All DBs
Position
Unknown
AA seq
1188 aa
AA seq
DB search
MGFFIVISFMFPVGNTVRYITSEKENQLKEAMIIMGVPCWLHWIGWFIRTMIFMIIAISI
CVAVIKVHLDVSWTLLWIFLFVYSISMTTYCFLLSSLFSKASIASIGAMVGWFALLVPYA
FLIDSSESEKFVACISSNIALVKGMELVYVFERKNGIQWSNVWETLPETGNFSLGIVACF
LLGSSLLYLLLALYIEKVLPEKYGVPAKWYFPFTKEFWCGVHSNIESEDGLVSSNPNFES
NPQHFSVGIKIKNLRKIYANKNVAVNGLTLNVFDDQITILLGANGAGKTTVMSMLTGWLA
PTSGSALLNGYDIRTNLQKARSSIGYCPQHNILFDELTVREHIEFFGRLKGLKKTDINRE
VNKYIQQLEMYKFIDKTSQSLSGGMKRKLSVVIALCGGSNVVFLDEPSSGLDPTARHGLW
NLLQAEKKGRTILLTTHFMDEADALGDRIAIMAKGELKCHGTPFFLKARFGSGYRLICAK
NDECNVNAVTDTLREFIPDIHVHEDIGSEFTYVLPAEHVDKFQHIFELLERNQHDLGISS
FGVSMTPLEEIFLKVSSDGRLSDKAQPQQNGFDTTDFEEPSSTPLLIGLSFHLNQWHAMF
KKRFICCKRRWIMLVFQNLIPPFTVLLMVFALEDLGYFENVEVVILYSLAFVATSKFYIM
FHIRERATKSKLLQFVCGVNVYTYWMSSFLFDYILYLLMAVISIVPFLVYEMQNWIDITG
VIVAVAAFGFSILPIIYVASFLFTSPSAGLNAMAIIPIMLNFILRVIPTQMPETEDEKKL
QWYFLIFPSYSFVDSCIKCVRHEENAKSNAFSWDYDKNGILRNLTYLVIVGVVSFGILAA
IELSKSFEILKNKTQSLNINDIDDDVLKEKQNVDAMTKAELRVTNLVLRKLTKNYSGFVA
VNKMSIAVKRAECFGLLGVNGAGKTSTFKMLTGDIAISSGEAYVQGICLKCNMLKVNKII
GYCPQFDALLNDLTGMETMEIFALLRGVRRNDIPSVIERLANELDFKAHLNKKISEYSGG
NKRKVSTAIALIGDPVVIYLDEPSSAMDAGAKRLLWQCLSKVRSSGKSIVLTSHSMEECE
ALCTRLAIMVNGELKCLGSTQHLKNKFSKGFWLTIKMMNTDDVHSESTTEFHASQIKEFV
IQNVTEAELREEYNGFLKYYIPPSDLKWSSMFGIMEIAKQTLPIEDYS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgggatttttcatagttattagttttatgtttcctgtcgggaatactgttcgatatata
acttcggagaaggaaaaccaattaaaagaagcaatgataatcatgggtgtgccttgttgg
ctgcattggattggttggttcatacgcacaatgatttttatgatcatagcaatatcaata
tgtgttgccgtaataaaggtacatttggacgtgagttggactttgctctggatcttttta
tttgtgtacagcatttcaatgacaacttattgctttttgttgagttcattgttttcgaaa
gctagcatagcatctattggagctatggttggatggttcgctttactagtaccatatgct
tttttgatagactcaagcgaatcagaaaaattcgttgcgtgtatttcatcaaatatagcg
ttggtaaaggggatggagctagtctacgtattcgaacgcaaaaacgggatacaatggtca
aatgtttgggaaacacttcctgaaaccggaaatttttcgttgggaattgtcgcgtgtttc
ttgctgggatcgtcgcttctttatttattattagcactatatatagagaaagtactgccc
gagaagtatggtgtgcccgcgaaatggtattttccattcacgaaagagttttggtgcgga
gtgcattctaatattgaaagtgaagatggtcttgtttcatcgaatccaaatttcgaaagt
aatccgcaacatttttcggttggaataaaaattaaaaatttacgcaaaatctacgcaaat
aaaaacgtggctgttaatggattaacattaaatgtattcgacgatcaaattacaatatta
ctcggagcaaatggtgccggaaaaactacagttatgtcaatgttaaccggttggttggca
cctacatccggttcggccctccttaatggctacgatattcgaacaaaccttcaaaaagcc
cgcagttcaattggatattgtccccaacataatattttgttcgatgaactaactgtacgc
gaacacatcgaattcttcggacgactgaaaggtttaaagaaaacggacattaatcgtgaa
gtgaataaatatattcagcaattggaaatgtacaaattcatcgataaaacatctcagtcg
ctgtcgggtggtatgaaaagaaaattatcggtcgtgattgcgctttgcggtgggtcgaat
gttgtatttttggatgagccttcttctggtctagatccgaccgctcgacatggtctttgg
aatttactgcaagctgaaaaaaagggacgaaccatcctgttgacaacacatttcatggac
gaagcagatgctctcggtgaccgaatagcgattatggccaaaggagaacttaaatgtcat
ggaacaccctttttcctgaaggcgcgctttggaagcggataccgcttgatatgtgcaaaa
aatgatgaatgcaatgttaatgctgtgaccgacactttgcgtgaatttattcccgatatt
catgtgcatgaagatatcggaagtgaatttacttatgttttacccgctgaacatgttgat
aaatttcaacatatattcgaactactagaacgaaatcaacatgatttgggaatcagtagt
tttggagtttcgatgacgccactggaagagattttcttgaaagtttcgtcagatggaaga
ctttcggataaagcccaacctcagcaaaacggttttgacacaacagattttgaagagcca
tcttcaactccattgttaattggtttaagttttcacttgaatcaatggcatgcaatgttt
aaaaaacgattcatttgttgtaaacgtcgatggatcatgcttgtgtttcagaatttaata
ccaccctttacagttcttcttatggtatttgcacttgaagatttgggatatttcgaaaat
gttgaggtggttatattgtattcgctggcatttgttgctacatccaaattttatattatg
ttccatattcgagaaagggcaacgaaatcaaaattattacaattcgtctgtggtgtaaat
gtttacacatattggatgtcatcatttttatttgattacattctttatctacttatggca
gttatttcaatcgttccatttcttgtatatgaaatgcaaaattggattgatataactggg
gttattgtggctgttgctgcttttggattttcgatattgccgataatctatgtggcctca
tttttattcacatccccaagtgctggacttaatgcgatggctataattccaataatgctg
aattttattttaagagtcataccaacacaaatgccagaaaccgaagatgagaaaaaactt
cagtggtattttctaatttttccatcatattcatttgttgacagttgcataaaatgtgtc
cgccacgaagaaaacgcgaaaagcaacgctttcagctgggattatgataaaaatggtatt
ttgcgaaatttaacgtacctggttatagttggtgttgtgtcctttggaattcttgccgca
atcgaactttcaaaatcttttgagatactgaagaacaaaacacaatcactgaatataaat
gatattgacgacgatgtgcttaaggagaaacaaaatgtcgatgcaatgaccaaggctgaa
ttgcgggtgactaatttagttctacggaagctgacaaaaaattatagtggatttgtggca
gtgaataaaatgtcgattgctgtcaaaagggctgaatgtttcggtctacttggtgttaat
ggagctggtaaaacgtccacatttaaaatgctaacgggtgacatagccatctccagtggc
gaagcatatgtacaaggcatatgtttgaagtgtaacatgttgaaagtgaacaagattatc
ggttattgtccacaattcgatgctttactcaatgatttaaccggcatggaaacgatggag
atttttgcactactacgtggtgttcgtcgcaatgatatccccagtgtaattgaacgtctt
gcgaacgaacttgatttcaaagctcatctcaacaaaaagatttcagaatattcgggcggc
aataaaagaaaagttagcactgccattgcattgattggcgatccagttgttatttatttg
gacgaaccgagttctgccatggatgcgggtgccaaacgtcttttatggcagtgtttatcg
aaggttagaagttctggtaaatcaatagtattaacatcacatagtatggaagaatgtgag
gctctttgcacccgcttggccatcatggttaacggtgaactcaaatgtcttggatcaacg
caacacttgaaaaataaattctccaaaggtttttggcttacaataaaaatgatgaataca
gacgacgttcactcggaatcaacgacagaatttcatgcatctcaaataaaggagtttgta
attcaaaatgttacagaagctgaattgagagaggagtataatggatttttgaagtattac
atcccgccatccgacttgaagtggtcgtcaatgtttggtatcatggaaatagctaaacaa
actctgccaattgaagactattca
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integrated database retrieval system
