Contarinia nasturtii (swede midge): 116350568
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Entry
116350568 CDS
T08003
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116350568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cns04121
]
116350568
Enzymes [BR:
cns01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116350568
Ubiquitin system [BR:
cns04121
]
Ubiquitin ligases (E3)
HECT type E3
116350568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
116350568
NCBI-ProteinID:
XP_031638244
LinkDB
All DBs
Position
Unknown
AA seq
2375 aa
AA seq
DB search
MSKIVCRFVLRLAENGNNCEQKGPEKSRTDVMDQPNFIASRTRSKTHSSPSPYKKPKLTP
KTNSISPSVDTNIAATLGSNIRKTSTRHHNTESASTSTSRRTPTNNLSAAHETNSFNNNV
SQSLNPASLLRRSSRSKVQQPTATTGSCVSSAASTQACTSYQVRGPASSANEAGASGSTS
TVASQSSSSGNNSSRRRRKSATYIANAGKLHDTDNNQVLVEASTSGMANNGSRDANAHNQ
GQTHYGKASKKFSLKLHRMTFTSADSNSSSSTKTNELIDMSNIHSLRRSPRGSVKTSNLS
TSATVHTSPLAVNASSIATSNNTKSSSSSNNLSNTATTTPSPWDAGHHHYHSTAGSSGSS
SNKQSSASLRGTSFFSALDSALAITQSQPSTSQTAGVSVSLSNSNGSASQQTSALPASTA
VAFSGDSESLANVNLAHSLAGASGSLPVSFGSSAPSAMDPEAADDPDVGRLQALLEARGI
PPHVFGSLAPRMHHLLHRTIGSNSTSKAQQLLQGLQSNDESQQLQAAIEMCQMLVMGNED
TLAGFPVKLVVPALINLLRMEHNFDIMNHACRALAYMLEALPRSSATVVDAIPVFLEKLQ
VIQCMDVAEQSLTALEILSRRHSKAILQANGISACLTYLDFFSMNAQRSALAITSHCCLN
LQPDEFHFVSESLPLMSRLLTQQDKKCVEYVCTAFYRLVESFQHDPTRLQEIAKKDLLKN
CQQLLVVTPSILNSGTFTNVIRMLSIMCSNCPDLAITLLKIDIDATLLYLLTGSSDTLAT
RQANGGTTDIELVERNPQELYEITCLIGELMPRLPNDGIFSVDALFEKPVQQDQVTWQWR
GDRGTWHSYSMMDSRAIEAAHQNSDDEISLSTMGRTYTIDFHAMQQINEDTATTRPVQRK
INPTANANTTPNMLATDSKNANTDGAVGFGECLHGTGTVNLALRPPNPYRDARLACLREE
RGLAAEFIKNMFSVLYEVYSSSAGPSVRFKCLRALLRMVYFASADLLREVLTNQMLSSHI
AGMMASNDLRIVVGAVQMAEILMQKLPEIFGVHFRRDGVMHQISLLADPKLPICEKSKNT
PSLSTPSVTVYEFDSSKSTPSSVLSSCFSRNSSTTTTPLTHHQSAPMQRRHMGPSTSSAS
FSLQAGGTTNSPMPLNHQQPLSTASLVTFHHPVESTSKDYSLPPHHNNYHLHHHHQQQQQ
QQQYQRLTIHHNSHAHYMLTEVMSVGGDVVSGGASSSSVTTNIALPIDQQQQQQPQQQSQ
IGHSSHSTQSHANAIQTKMSDILKRKAPPKRKSQTSSRSKTRNQEHNNEQPSVMQELMNK
ASALGSSGRSTPSTSSTPMNVGASGSAGSSGSSRSRFGSSSKTSSFLASLNPARWGRTTS
MHSHSSSKDSGHSSSSGAGTSSSSTLINEHSSSSSLIAAGNREKARQWIREHAVEFNKHY
DGESDLASEPTVLVRLTTVIQNLNGNLESCVDALNDLKHILLISDISPFEFNHSGLIRSM
LKFMTSEQEAVHRDDRLRAFLNVFTGLPLNTTNVSGSILSSANIENSAFSSFVAKLNGCV
TQLEQFPVKVHDFYGGSNTSALKFFNTHQLKCNLQRHPDCTNLRQWKGGTVKIDPLALVQ
AIERYLVVRGYGGIRVDSEEDSEEDIDDSVAAVVMSQASFKHKLQFLIGENVLPYDMTVY
QAIRQFSPLVNDQSETDTESDIMQSNASIWVQQHTIYYRPIEEEPSQHAHNQPSGSSSSN
AVGGTSISTRASSSSSSSSRKHSEKSSSKSSRKKSEYWTDGIHQVVSPISSFLTNLLPKD
IVTVQDASLDALCMLRIVHALNRHWESLYNGNFTHEDIIPASEFIHSKITAKANRQLQDP
LVIMTGNLPQWLQQIATVCPFLFPFETRHLLFYAITFDRDRALQRLLETTPDLNSTDTTE
KVTPRLDKRKRTISREDILKQAEHIIQDFGHTKALLEIQYENEVGTGLGPTLEFYALVSA
EIQRCDLGLWNESDTYHSPSSSIDDCVKNVVNEMEDDQQMSQTDEQDEVNNALNPISNYQ
TSAANVRQYVHAQFGLFPMPISHSAKQIQISRTKSKFKFLGKFMAKAIMDSRMLDLPFSI
PFYRWLLYEDSSLGLADLSSVAPEVQVSLKRLQNIVRERDEILANSAIDQDTKNVKIESL
HYDGCPIADLGLNFTLPGHATIELRRGSRDTAVNIHNLHQYVALVTQWFLVEGVQTQFEA
LREGFDSVFQSQRLRLFYPEEIEKVLCGSSLNNYHRWDVKMLQDCCRTDHGFTPESKAIQ
YLYEILSTYNREEQRLFLQFVTGSPCLPTGGFKAYNPPLTIVRKTLDPNENPDDYLPSVM
TCVNYLKLPEYSSREAMRSKLKTACVEGSMSFHLS
NT seq
7128 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaatcgtctgccgttttgttcttcgtttagctgaaaacggaaataattgtgaa
caaaagggcccagaaaaatctcgtaccgatgtcatggatcagcctaatttcatcgcaagt
cgtacacgatcaaagacacacagttctccgtcaccgtataagaaaccaaaattaaccccg
aaaaccaattcaatttcacctagtgtagatactaatatagctgcaacgctgggttcaaac
atacgcaaaacatcgactcggcatcataacaccgaaagtgccagtacgagcacttcacgg
cgaacaccgaccaataatttatcggccgcacacgaaacgaactcttttaacaataacgtt
tcacaatcgttaaatccagcaagtctcctaagacgtagttcaagaagtaaggttcagcaa
ccgactgcaacgacgggttcctgcgttagttccgctgcaagtacacaggcttgcacatcg
tatcaagtacgcggtccagcttcatcagcaaacgaagctggtgctagtggttcaacctcg
acagttgcatcacagagcagcagttcgggtaacaatagctctagacggcgtcgaaaatca
gccacatacattgcaaacgctggaaaattacatgatacagacaacaatcaagttttagtt
gaagcttcaacatcgggaatggcaaataatggatctcgtgatgcaaatgctcataatcag
ggccaaactcattacggtaaagccagcaaaaaattctcattaaaactacacagaatgaca
ttcacttcagctgactcaaactcttcttcttccacaaaaaccaacgaattgatagatatg
tcaaatatacacagtttaagacggagtccacgtggtagtgttaagacaagcaatttaagc
acatcggcgaccgttcacacatcgccattagccgtcaatgcgtcatcaatcgcaacgtca
aacaacaccaaatcatcttcctcgtcaaataatttaagcaacacagccacaacaacgcca
tcaccatgggatgctggtcatcatcattatcacagtacagctggttcgtctggttcaagc
agtaataaacaatcatcggcttcattgcgcggaacaagcttcttttcggcactcgattca
gcgctcgcaataactcaaagccaaccatccacttcacaaacggccggtgtttcagtttcg
ctttcaaacagcaatggttcggcatcacaacagacgtcagcacttcccgctagtacagcg
gtcgcatttagtggtgactctgaaagtttggcaaacgtaaatttggcccatagtctggct
ggtgcaagtggttcacttccagtcagtttcggtagttcggctccatcggccatggatccc
gaagcggcagacgatccagacgttggacgtttacaagcattgttggaggctagaggcatt
ccacctcatgtattcggttcattggctcctcgcatgcatcatttattgcacagaacaatc
ggttcaaatagtacgtcgaaagcacaacaattgctacaaggtttgcagtcgaatgatgaa
agccagcaattgcaagcagcaattgaaatgtgtcaaatgttggtgatgggcaatgaagat
actctggcaggttttccagtaaaattggttgtcccagctctcatcaatctacttcgaatg
gaacacaatttcgatataatgaatcatgcatgtcgtgcactcgcttatatgctcgaagca
ttgccccgatcatcggcaactgtggtcgatgccattccggtgtttcttgaaaaattgcaa
gtcattcagtgtatggatgttgctgaacaaagtttaaccgcattggaaatactttcacgt
cgtcacagcaaagccattttacaagccaacggtatatcggcttgtttaacgtatttggat
ttcttttcgatgaacgcacaacgatccgccttggccataacttcgcattgttgcttaaat
cttcagccagatgaatttcattttgtaagcgaatcattgccattgatgtcacgtttgcta
acgcaacaagataaaaagtgtgttgaatacgtatgcacggcattttatcgtttggttgag
agtttccaacatgatccaacccgattgcaagaaattgccaaaaaagatttactcaaaaat
tgtcaacaactattggttgtaacgccatcgatattgaactcaggcacatttaccaatgta
attcgtatgctcagtattatgtgctcgaattgtccggatctggcaataactctattgaaa
atcgacattgatgcaacgctattgtacttgctgaccggatcatctgatactttggcaaca
cgacaagcaaatggcggcaccaccgatattgaattagtcgaacgaaatccacaagaatta
tacgaaatcacctgtttgattggtgaattaatgccacgtttgccaaacgatggaatattc
agtgtggatgcactgtttgaaaaaccagtacaacaggaccaggttacttggcaatggcgc
ggtgatcgtggcacatggcattcttattcgatgatggattcgcgtgcaatcgaggctgct
catcaaaattcggatgatgaaatcagcttatcaacaatgggccgaacatatacaattgac
tttcatgcaatgcaacaaataaacgaagacacagcaaccacacgaccagttcaacggaaa
ataaatccaacagcaaatgcaaacacaacaccaaatatgctggccactgactcaaagaat
gctaatacagacggtgcggttggttttggtgaatgtctgcacggtaccggaacggttaat
ctagcattacgaccaccaaatccatatagggatgctcgattggcttgtttgcgcgaagag
cgcggtcttgcagccgaatttattaaaaatatgttctcagttttgtacgaagtgtacagt
tcatcagccggtccatcggttcgattcaagtgtttacgtgcactcttgcgaatggtgtat
ttcgcaagtgcagatttattacgtgaagttttaacaaatcaaatgctatcgtcacacatt
gctggcatgatggcatccaatgatttgcgaattgttgttggtgccgttcaaatggccgaa
attcttatgcaaaaattaccggaaatattcggtgttcatttccgtcgtgatggggttatg
catcaaataagtttattagccgatccaaaattgccgatttgcgaaaaatcgaaaaacaca
ccgtcgttaagcaccccgtcagttaccgtttatgaatttgattcgagcaaatcaacaccg
agcagtgttttaagctcgtgtttctcgcgaaacagtagtactacgacaacaccattgact
catcatcaatcggcaccaatgcaacgccgacacatgggtccatctacgtcatcggcaagt
ttctcgttgcaagccggcggcacaactaatagtccgatgccactcaatcaccaacaacca
ttgtcgacagcatccttagttaccttccatcatccagtagagtcaacttctaaagattat
tcgctaccgcctcaccataataattaccacctgcatcatcatcatcaacaacaacaacag
caacagcaataccaacgtcttacaatccaccataattctcatgcacattacatgctcaca
gaagtgatgagtgttggtggcgatgttgtaagcggcggtgcatccagcagcagtgtcacc
acaaacattgcacttccaattgatcaacagcaacaacagcagccgcaacaacaatctcag
attggtcattcaagtcattcgacacaatcacatgcgaatgctattcaaacaaaaatgtca
gatatattaaaacgaaaagcaccaccaaagcgtaaatctcaaacttcatcacgatcaaag
actcgaaatcaagagcacaacaacgaacaaccgtcggtgatgcaagagttgatgaataaa
gcatcagctttgggatcatcgggacgtagtacaccatctacatcgtcgacaccaatgaat
gtaggcgccagtggaagtgccggctcatcgggatcgtctcgttcacgtttcggttcaagt
tcaaagacttcatcgtttttggcatcattgaatccagctcgttggggtcgaaccacttca
atgcattcgcattcatcgtcaaaagacagcggtcattcgagcagtagcggcgctggaacc
agtagttcaagcacattgatcaatgaacattcgtcaagctccagtttgattgcagctgga
aatcgtgaaaaagcacgccaatggattcgtgaacatgctgttgagttcaataagcattat
gatggtgaaagtgatttagctagtgaaccaacagttttagtacgtttgaccaccgtcatt
cagaatttgaatggaaatcttgaaagttgcgtcgacgcacttaatgatctcaagcatatc
ctactcattagtgatatatcaccgttcgaattcaatcactctggtttgattcgttcgatg
cttaaatttatgacatccgaacaagaagccgtacacagagacgatagactgcgcgctttc
ttaaacgtattcaccggtttaccattgaatacaacaaatgtcagcgggtctattctatca
agtgcaaatattgagaactccgcatttagttcatttgtagccaaattaaatggttgtgtc
acccaattggaacagtttccggtaaaagttcatgacttttacggtggttcgaatacaagt
gcacttaaatttttcaacacgcatcaattaaagtgcaacctacaacgtcatccagattgc
acgaatttgcgtcaatggaaaggtggtaccgttaaaattgatccattggctttggtacag
gccatcgaacgatatttggttgtgcgtggctacggtggaattcgtgtcgattccgaagaa
gactccgaagaggatattgacgatagcgtggcagcggttgttatgtcacaagcatcattc
aaacataagctacaatttttgattggtgaaaatgtgttgccatatgatatgactgtgtat
caggctattcgacagttttcgccactagttaatgatcaatcggaaaccgatacagagtca
gatataatgcaaagtaatgcaagcatttgggttcaacagcataccatttactatcgtcca
attgaggaagaaccaagtcaacacgcgcataatcaacccagtggtagtagttcaagtaat
gccgttggtggtacatcgatcagtacgcgagcatcatcgtcctcttcgtcatcgtctcga
aaacactcagaaaaatcgtcatcaaagtcatcacgcaagaagtctgaatattggaccgat
ggcattcatcaagttgtttcgccgatttcaagtttcttaacgaatttattgcccaaagat
atagtaaccgttcaagatgcatctttggatgctttgtgcatgttacgtattgtgcatgca
ttgaatcgacactgggaatcactttacaatggcaactttacacatgaagatattattccg
gcatcggaattcattcactctaagataacggccaaagcaaatcgccaacttcaagatcca
ctcgtgataatgactggaaatcttccacaatggttacagcaaattgcaacagtttgccca
ttcctgttcccattcgaaacacgccatttgctattctatgccataacattcgatcgtgat
cgtgcattgcaacgcttgcttgaaactacgcctgatctcaattcaacggataccaccgaa
aaagtcacaccacgtttagataaacgtaaacgtaccatatcacgtgaagacattctcaaa
caggccgaacacatcattcaggactttggacacacaaaagcactgcttgaaattcaatat
gaaaatgaagttggaaccggtttgggaccaacgcttgaattctacgcactggtttcggct
gaaattcaacgctgtgatttaggtttatggaatgaaagtgatacgtatcattcaccatct
tcatcaatcgatgactgtgttaagaatgtggtgaatgaaatggaagacgatcaacaaatg
tcacaaacagatgaacaagatgaggttaacaatgcactgaatccgatatcaaattatcaa
acgtcagcggcgaatgttcgacaatacgttcatgcccaattcggtctcttcccaatgcca
atcagtcatagtgccaaacaaatacaaatctcacgcaccaaatcaaaattcaagttcttg
ggcaaatttatggctaaggcaatcatggatagtcgaatgttggatctaccattttcaatc
ccattctatcgatggttgttgtatgaagacagttcacttggactggccgatttatcatcg
gtggcaccagaagttcaagtctcattgaaacgtttgcagaatattgtacgtgaacgtgat
gaaattttggcaaattcagccatagatcaagacaccaaaaatgtcaagattgaaagttta
cattatgatggctgtccaattgccgatttgggcttgaacttcacacttccaggtcatgca
accattgaactccgtcgtggtagtcgagatactgcagtcaatattcataatttgcaccaa
tatgtcgctttagtaacccaatggttcttagtcgaaggtgtacaaacacaattcgaagca
ctccgtgaaggatttgattcggtgttccaatcacaacgattgcgtctcttctatcccgaa
gaaatcgaaaaggtgctgtgcggatcaagtttgaacaactatcatcgttgggatgtgaaa
atgttgcaagattgttgtcgtaccgaccatggattcacacccgaatcgaaggccattcag
tatttgtatgaaatactaagcacatacaatcgcgaagaacaacgtttattcttgcaattt
gtcaccggttcaccgtgtttgccgactggcggtttcaaggcatacaatccaccattgacc
attgtacgcaaaacactcgatccaaatgagaatccagatgactatttgccatcagtcatg
acatgtgttaactacttgaaactgcccgaatattcgagtcgcgaagcaatgcgtagcaaa
ttgaaaacggcatgtgttgaaggtagcatgagtttccatttgtcttaa
DBGET
integrated database retrieval system
