Contarinia nasturtii (swede midge): 116350626
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Entry
116350626 CDS
T08003
Name
(RefSeq) protein rhomboid isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cns01002
]
116350626
Enzymes [BR:
cns01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
116350626
Peptidases and inhibitors [BR:
cns01002
]
Serine peptidases
Family S54: Rhomboid family
116350626
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhomboid
EF-hand_6
EF-hand_7
EF-hand_1
EF-hand_9
Motif
Other DBs
NCBI-GeneID:
116350626
NCBI-ProteinID:
XP_031638338
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MWPGFEKFKTKQDNSSQNETIDHISTIAGSLASIGTEHTESPGLDDRVYDTDHTDLNSDF
DESELRRELLEDKWRQLFDKFDPEGFGEIPVNDFLVALKSPELQTQVPFNKIELLYHRAL
KSKEPHGTGSISFQEFVNVMSGKRSRSFKCAVHHRDREVCSENDFHIIYEYQPLFQRMVH
VIAMEVLPEERDRKYYADSYSCCPPPLFILLITIIELGFFAYYWSGQLEPAGPIPIDSLF
IYRPDKRQEIWRFGTYMVLHAGWFHLAFNLIVQLLVGLPLEMVHGSTRIGCVYLAGVLAG
SMGTSVFDPEVYLVGASGGVYALLAAHLANVMLNYNNMHYGIIRIVGIFLFASFDVGFAI
YNRYAIEPTTAPSISYIAHLTGALAGLTIGLLVLKSFEQKLHEQLIWWIALGVYSACTIF
AIAYNVLNTITIQKLEENPEVLKERLFNGFI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgggatttgaaaagttcaagacaaaacaggataattctagtcaaaatgaaaca
atagatcacatctcaacaattgccggctcattggcatccatcggaactgaacacactgaa
tcaccgggcctggatgatcgcgtctacgataccgaccataccgatctcaactccgatttc
gacgaatctgaactgcgacgtgaactcctagaagacaaatggcgtcaactcttcgataaa
tttgatccagaaggttttggcgagattcccgtcaatgattttttagttgccttaaaatcg
cctgagcttcaaacccaagtgccttttaataaaatcgaattgctttatcatcgtgcattg
aaatcaaaagagccacacggtaccggctccatatcatttcaggaattcgtgaatgtgatg
agcggtaagcggtcacgcagtttcaagtgtgctgttcatcatcgagatcgcgaagtttgc
tctgaaaacgattttcatattatatacgagtaccaaccactatttcaaagaatggttcac
gtaattgcaatggaagtgctaccggaggaacgagaccggaaatattatgcagacagttat
tcatgttgtccgccaccgctgttcatactcttgatcacgataatcgagttgggatttttc
gcctactattggtctggacaacttgaaccagccggtccaattccaatcgattcgttattc
atttatcgacccgataaacgacaagaaatatggcgttttggaacgtatatggttttacat
gccggatggtttcatttggctttcaatctaattgtacaactcttggtgggcttaccatta
gaaatggtacatggttcaacgcgcatcggttgcgtttatttggccggtgtattagctggt
tcgatgggcaccagcgtattcgatcctgaagtgtatttagtcggtgcaagcggtggtgta
tatgcattgttggcagcacatttggctaatgtcatgcttaactacaacaacatgcactat
ggcatcattcgaattgtcggcatttttctatttgcgtcatttgatgtgggttttgccatt
tacaatcgatatgcaattgaaccaacaacagcgccgtccatttcatacatcgctcattta
acaggagcactggccggccttaccatcggtttgttggtgctgaaaagtttcgaacaaaaa
ttacacgaacaactgatttggtggattgcgctgggcgtttattcggcgtgcacaatattt
gccatcgcctataatgtattaaatacgatcaccatacaaaaattagaagaaaacccggaa
gtacttaaagaacggttatttaatggttttatatga
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