Contarinia nasturtii (swede midge): 116350664 Help Entry 116350664         CDS       T08003                                  Name (RefSeq) DNA repair endonuclease XPF   KO K10848   DNA excision repair protein ERCC-4 [EC:3.1.-.-] Organism cns  Contarinia nasturtii (swede midge) Pathway cns03420   Nucleotide excision repair cns03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:cns00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     116350664    03460 Fanconi anemia pathway     116350664  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cns03032]     116350664    03400 DNA repair and recombination proteins [BR:cns03400]     116350664 DNA replication proteins [BR:cns03032]  Eukaryotic type   DNA Replication Termination Factors    Other termination factors     116350664 DNA repair and recombination proteins [BR:cns03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     Other NER factors      116350664 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  ERCC4 Motif Other DBs NCBI-GeneID:  116350664 NCBI-ProteinID:  XP_031638399 LinkDB All DBs Position Unknown AA seq 1015 aa AA seqDB search MDSESNDPQPSTSNQPPLDGDQFNDSEINADKELDRLLTVEEFLLKSKTFMIEYEKHMFL DTVDSDCLVVSARGIGYERVVLNLLKVYCDPANLIIVINSADYEEKYYRSQLEPRYVHES STNSNERELTYLMGGIHFISTRILVVDLLKKRIPMELITGIIVLRAHQIIESCQEAFALR LYRQSNKTGFVKAFSNNAEAFTYGYGHIEKVMRNLFVTELLIWPRFHALTRKALKAFEPT VIELHIPMTDKMISIQTALLDIMNFVVKEIKRINRYIDMQEITVENCVTKRFHKILQSQL DSVWHQLNSQTKMLISDLKVLRSLMISTIYNDAVSLFVTMKRYRSQEYALNNSGWILLDT AEQIFKTTRDRVYNSNDEFEPEKCPKWDTLSEILRVEIPSDVRASIESGRRAANKPIVVL ILCQDSRTCYQLNQYLTEGAEKYLLFTAMKNDIPIKKLSEAYKNVRESDINSIRLRGSHM QNETIKPTTSLASTTTTSATKRKAAPESEDASQTLNSTVSDTGKKGFLRDRIAKRKEAEM KEFGEEDETNKPANELDELATEDISEFSLYRESYVLTVTENPSIEVPAEAAKDDSFDVTQ MTNGQFESFAELETLDISQIIQHQRKPIVCIQTFKTGEDGPISLDRTLNEIDPAYVIMYH CNVTAIRQIEVYEARKRRVQSQRLKVFFLVHAQTVEEQSYLTSLRREKQAFELIIDTKSK MVIPEHQDGKTDDSLIAFQKVTDVVTNTRQAGGQQTEEGTIIPRIIVDMREFRSDLPCLI HRRGIQVVPVTITIGDYILTPDICVERKSISDLIGSLNSGRLYTQCIQMTRHYKKAILLI EFDQNKPFYLQGNYIISGESATSNIDITQKLQLLTIHFPKLRFVWSPSPYATAQLFGELK HGKLEPDPIQAAALGSDENSRELDSIADRMNTNIYDFLLKLPGITTRNIGKVMTKVKNLR ELIKMNMEQLTDLLGSEANAKMFWEIIHIAHKPVEAESNEKQFMSKFKRGKGKRF NT seq 3048 nt NT seq  +upstreamnt  +downstreamnt atggattcggagtcgaatgatccacaaccttcaacgtcgaatcaacctccattggatggc gatcaattcaatgacagtgaaataaacgccgacaaagaactcgatagattgttaacggtt gaggaatttttactcaaatcaaaaacttttatgatagaatatgaaaagcacatgtttctt gatactgttgactctgattgtctggtggtgagtgcaagaggtattggatatgaacgtgtg gtactcaatctgctcaaggtatactgcgatccagcaaatctaattattgttataaacagt gccgattacgaggaaaagtactatcgtagtcaattggaaccaagatatgtacacgaatca tctaccaatagcaatgagcgcgagctcacctatctaatgggtggcattcattttatctcc acgcgcattttggtagttgacttgttgaaaaaacgtatcccaatggaattaataactgga atcattgtattgcgggcacatcaaattatcgaatcttgccaggaagcgttcgccttgcga ctgtatcgccaatcgaataaaactggatttgtaaaggctttttcgaacaatgccgaagca ttcacctatggatatggtcacatcgaaaaggtgatgcgaaatctctttgtcaccgaatta ttaatttggccacgatttcatgcactaacccgaaaagcattaaaagcatttgagccaact gtgatcgaactacacataccaatgacagataagatgatttcaattcaaacagcgttactt gacataatgaacttcgtggtgaaagaaatcaaaagaatcaatcgatatattgacatgcaa gagataacagttgaaaattgtgtgactaaacgtttccacaagattttacaatcacagctt gacagcgtttggcatcaattgaactcccaaaccaagatgctgatatccgatttgaaagtc ctacgaagtttaatgatctcgaccatttacaatgatgccgtgtctttgttcgttacaatg aaacgatatcgaagtcaagagtatgcattgaataattctggatggattttattggatacc gctgaacaaattttcaaaacgacacgtgatcgtgtctataattcaaatgatgaattcgag ccagagaagtgtccgaaatgggatacattgtccgagatactgcgtgttgagattccgagt gatgttagagcatccatagaaagtggacgacgagcagccaataaaccgatcgttgtactg attttatgtcaagattctcggacatgctaccaactaaatcagtatttgactgaaggtgct gaaaaatatttgctattcaccgccatgaaaaacgacataccaataaaaaagctatctgaa gcttataaaaatgtcagagaaagtgatataaatagtattcgtctgcgtggaagtcacatg cagaacgaaactattaagccaacaacaagtttggcatccaccactacaacctcagctacc aagcgaaaggctgcaccagaatcagaggatgcaagtcaaacactgaatagtaccgtatca gatacgggcaaaaaaggatttttgcgcgatagaatcgcaaaacgaaaggaagcggaaatg aaggaatttggagaagaagatgaaaccaacaagccggcaaatgaattggatgaacttgca acagaagatatatcggagttctcactttaccgtgaatcatatgtattaacagtcaccgaa aatccatcgattgaagttccagccgaggctgcaaaagatgactccttcgacgtaacacaa atgacaaacggtcaatttgaatcttttgctgagcttgagactcttgacattagtcaaatc attcaacatcaacgaaaaccaatagtatgcattcaaacgtttaaaactggtgaagatggt cccatatcattagatcgaacactgaatgaaatcgatccagcatatgtcatcatgtaccat tgtaatgtgacggcgattcgtcaaattgaggtgtacgaagcacggaagcgacgtgtacaa agccaaagactgaaagtcttctttctcgtacacgcacaaactgtcgaagaacaaagctat ctcacatcattgcggcgtgaaaaacaggcattcgaattgattatcgataccaaatcgaaa atggtcataccagagcatcaggatggaaaaacggatgattcattgattgcctttcaaaaa gttacggatgtggtgacaaacactcggcaagctggcggtcaacagaccgaagagggcaca atcattccccgaataattgtcgatatgcgagagtttcgatcagacctaccatgtttgata catcgtcgtggtattcaagttgttcctgttacaataacaattggtgattacattttaacg ccggatatttgcgtcgaacgaaaatctatatcagacttaattggttcgctgaattcaggt cgcctgtacactcaatgtattcaaatgacaagacattacaagaaagctattttactcatt gaattcgatcagaataaaccgttctatctccagggcaattacataatttcgggtgaatca gcaacatcaaacatcgatattacacaaaaattgcagttgctcacgattcactttccgaaa ttgcgtttcgtttggtcgccaagtccatatgccaccgctcaactatttggtgaactcaag catggaaaactcgaacctgatcccattcaagcagcggcactcggatccgatgagaattca agagaattggatagcattgccgatcgaatgaacacaaacatctatgattttcttctgaaa ttgccaggaatcacgacaagaaatattggaaaagtcatgacaaaggtgaaaaacttgagg gagctcatcaaaatgaatatggaacaacttaccgatcttcttggaagtgaagcaaacgca aaaatgttttgggaaattattcacattgctcacaagccagtcgaagccgaatcaaacgaa aagcagtttatgtcaaagttcaaaagaggcaaaggaaagcgattttag

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