Contarinia nasturtii (swede midge): 116350665
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Entry
116350665 CDS
T08003
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116350665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116350665
Enzymes [BR:
cns01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
116350665
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
90S particles
Other 90S particles
116350665
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
116350665
NCBI-ProteinID:
XP_031638400
LinkDB
All DBs
Position
Unknown
AA seq
239 aa
AA seq
DB search
MGKKRKFEVEQKETNEFGLHAKFLATSHIRSQEKRLIVVLEGAQLETVKVGNTFELLNCD
DHINIMRRNHKDPATVRPDITHQSLLMLFDSPLNRAGLLQVYIHTHKNVLIEINPQTRIP
RTFKRFGGLMVQLLHKMSVRAADTTVKLMKVIKNPITDHLPVGCKKYVMSYTGTLVKNPR
ELVPKNDDEPIALVIGAFAHGNVDVDYTEGSFSISNYPLSAALACSKLCNAFEEVWNVV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaagcgtaagtttgaggttgaacaaaaggagaccaatgaatttggtttgcac
gcgaaatttttggccactagtcacattcgatcgcaagaaaagcggttaattgtcgtttta
gaaggggcacaattggaaacagttaaggttggaaatacttttgaactactaaattgcgac
gatcacatcaatattatgcgaaggaaccacaaagacccggcaaccgttcgtccggatatt
actcatcagtcgttgttgatgttatttgattcgccgttgaatcgtgccggtttattacag
gtgtacattcatacacacaaaaatgtactaatcgaaattaatccacaaactcgaattcca
cgtactttcaaacgatttggcggacttatggtgcaattactacacaaaatgagtgtacgg
gccgccgatacaacagtcaaattgatgaaagtaataaagaatcccatcacagaccattta
cccgtcggatgtaaaaaatatgttatgtcatatactggaacactcgtgaagaacccacgt
gaacttgtgcccaaaaacgatgacgaaccaattgctttggttattggtgcatttgctcat
ggaaatgttgacgttgactacaccgaaggttcattttcgatcagcaattatccgttgtcc
gccgctttggcttgctcaaaactgtgtaatgcatttgaggaagtatggaatgtggtttaa
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