Contarinia nasturtii (swede midge): 116350695
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Entry
116350695 CDS
T08003
Name
(RefSeq) sterol regulatory element-binding protein cleavage-activating protein
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116350695
Membrane trafficking [BR:
cns04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116350695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
Patched
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_like
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
NPC1_MLD
Beta-prop_HPS5
WD40_2
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
116350695
NCBI-ProteinID:
XP_031638456
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
MSQINKSHHVKETKSELPSRVAQWYYKHGLFLSSYPTCASSLAIFMVIFSCYPLLNIPLP
GTIPTKVILPYEEQATIKSPTILINSSSSVPIGSTSTSNASYEQPPFPWANSDPFVYIQQ
IVIRSSVLPWRKNLLLTDAYRGPLHEIFKLLEIVRNHEDETSKTNLANICLHVENVKMFT
KYSSVFPEYNCLILSPANLWQQNAQNFKKDTNLLSTIFHHHNLQKSKVSIAEMLFGMLLR
DTGVKRYPIRVRPRIIQYAITLVLEKNDPIFIESLKQKLMQAYPLHQENVAKSTYREAIT
YIYYPGEFNVVECLPMCIAFLLVFMYVYFSVRKIDVFKSRFVLAVSAVVTVLSSLMMALG
LYFFFGLTISMQSRDVLPYLIMLFGLENVLVITKSVVSTDEKFDVKIRVAQGLSKEGWSI
TKTLLTEITILTIGLITFVPVIQEFCIFAIVGLISDFFMQMLLFSTILALNIRRIEFSSI
AKSSNVPDMAQRVPYRYLANTPKVQSTSMSRSRSHPKFSVAQDSMQPTDVVAAGNAIAEA
KKIPKRLKIFNFWARTRFFQRAFMLWMIVWICSIVYNSGIFEHIFVIERKNNTELTDDSG
FETYPSHGMQISTIDIKTGDSVSYVTKESDSQPKSTYFDEKQYNMTEQLNKLRHPDYDVN
LHLSNFHWSSILKQYNISVSGKYVTILPTIRISHAVTPDEAIYLRNIDEKPKLHFQWKAL
AIALDPIDFADMEEKEGSIAYHLTNSGGYNIGSTPLYPKTPMEMLLATILCMISIFVTSY
AMIVFYRCICSRNYAEWRSSWNDSKMDIAYPKTQRIFESIPIQIKGHSHRIECMVTDGRM
LACSCLDGKITTWDVSNGEQISVINRKNYFNINRRLSGSYTPSVCNDGSAPITMTAMPSE
KAAPTKKPEVSPIWCLDYTDNLIVIGCADGKIEFWESTTGTLKCIYEGEGKQNYGITHLH
LSGDRLVAARLNGRIDFLRLETYNQGRQIDWGFMSAYRRTHMRTGSTGSLSSAQMASQGG
DLSPIASSSHEEMRCYLEQQHQGHQQLITCMDVVGNTVLTGSQDHTLKVFKLDLANLVFT
LHGHYGPITSIFIDHYQSCTGGSGSQDGLLCVWDLITGACMYSIQAHDGAIVSLICSSSY
VISMGTDERLYIWERFQGNLLNTINVPYVYTSLLMLTPSLLITAKPGALVIWDVRNGELT
REIKLDCLNSHLCSKKILFASGSVVCDYGNEMRIIRFPVVNDKCD
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaattaataaaagccatcatgtaaaggaaacaaaaagtgagcttccatcccgt
gtcgctcaatggtactacaagcatggcttgtttctgtcgagttatcccacctgtgcgtcc
agtttggcaatttttatggttatattttcatgctatccattattgaatattccattgccc
ggaacgattccgaccaaagtcattctaccgtacgaagaacaagcaaccataaaatcacca
acgattttaataaattccagttccagcgttccgataggatccacctccaccagcaatgca
tcgtatgaacaacctccatttccatgggcgaatagcgatccatttgtctatattcaacaa
attgtgattcgatcgagtgtattgccatggcgaaaaaatctattgcttacggatgcgtat
cgaggtccattacatgaaattttcaaactattggaaatcgttcgaaatcatgaagatgaa
acgagcaaaacaaatttggccaacatctgtttgcatgtggaaaatgtaaaaatgttcaca
aaatattcatcggtatttcccgaatacaattgtctgatcctatctccggcaaatttatgg
caacaaaatgcacaaaactttaaaaaagacacaaaccttctatcaacgatttttcatcat
cataatttacaaaagtcaaaggtatcaatagcagaaatgctctttggtatgcttttgcgt
gatacgggtgttaaaagatacccaatacgagtacggccaagaataattcagtacgcaatt
acattggtattggaaaaaaatgatccgatttttatagaatcgttgaagcagaaattgatg
caagcatatccattgcatcaagaaaatgtggcaaaatcaacataccgtgaagcaatcaca
tacatatactatcccggtgaatttaatgttgttgaatgtctaccaatgtgtatcgctttt
ttgcttgtttttatgtatgtctatttttctgtacgaaaaattgatgtgttcaaatcacgt
ttcgtgttggcagtgagtgcggtagtaacagtgttgagcagtttgatgatggcattggga
ttatatttcttctttggattaacaataagcatgcaatctcgtgacgtactaccgtatctg
ataatgttgtttggattggaaaatgtgctggtcatcacaaaaagtgttgtgtccaccgat
gagaaatttgatgtgaaaattcgtgtcgcacaagggctcagcaaagaaggatggtcgatt
acaaaaacactacttacggaaattacaatattgaccattggtttgataacatttgtacca
gtgattcaagagttttgtatatttgccattgttggcctaatatcggatttcttcatgcaa
atgttgctcttttccaccattcttgccttgaatattcgacgcattgaatttagcagcata
gcgaaatcatcaaatgtaccggatatggcacaacgagttccgtatcgttatttggcaaat
acacccaaagtacaatccacctcaatgagtcgatctcgatcacatccaaaattttccgtt
gctcaggattccatgcaaccaacagatgtcgtggccgctggcaacgccatcgccgaagct
aaaaagataccaaaacgtttgaaaatttttaacttttgggcacgaacacggttctttcaa
cgtgcctttatgctctggatgatcgtctggatttgttcaattgtttacaattccggtatt
ttcgagcatatttttgtgatagaaagaaaaaataacaccgaattgacggatgatagtggt
tttgaaacttatccatcgcatggaatgcaaatttcgactattgatatcaagactggtgat
agcgtatcgtatgtgaccaaagaaagtgattcacaacctaagagcacatattttgatgaa
aagcaatataatatgactgaacaattaaataaactacgacatcctgactatgatgtaaat
ttgcatttatcgaatttccattggtcatcaattttaaaacagtacaacatttcggtgagt
ggaaaatatgtaacaattctaccaacgattcgtatttcgcatgctgttacaccagacgaa
gcgatttacttgcgaaatattgacgaaaaaccaaaacttcatttccaatggaaagctctg
gccatcgcattggatcccattgattttgccgatatggaagaaaaagaaggatcaattgct
tatcatttaaccaattcgggtggctacaacattggctcaacaccattatatccaaaaaca
ccaatggaaatgttgctagccaccattctttgtatgatcagtatctttgtgacgtcgtat
gcaatgattgtgttttatcgatgtatttgtagtcgaaattatgcagaatggcgttcaagt
tggaatgattcaaaaatggacattgcatatccaaaaacacaacgaatttttgaaagtatt
ccaattcaaataaaaggtcatagccatcgaattgagtgcatggtaaccgatggcagaatg
ttagcatgttcatgtcttgatggaaaaatcaccacatgggacgtctcgaatggtgaacaa
atcagtgtgataaatcgtaaaaattactttaatataaatcgacgattgtcaggttcatac
acaccgtctgtttgtaatgacggttcagcaccaatcacaatgactgcaatgcccagtgaa
aaagcggctccaacaaaaaaaccagaagtatcgccgatttggtgtttggattatactgat
aatttaattgtaattggttgtgccgacggaaaaattgaattctgggaaagcacaaccggc
accctcaagtgtatatatgaaggcgagggaaagcaaaattatggaataactcatttacac
ttgagtggcgatcggttagtagctgctcggctcaatggtcgtattgactttttgcgattg
gaaacctataatcagggacggcaaattgattggggtttcatgtcggcctatcgtcgaacg
cacatgcgaactggctcaacgggaagcctatcaagtgctcagatggcaagccaaggtggt
gatctttcgcccattgcatcgagtagtcatgaggagatgcgatgttacttggaacaacag
caccaaggacatcaacagctaatcacctgtatggatgttgttggcaatactgtattaacc
ggaagccaagatcatacattaaaggttttcaaattagatttagccaatttggtgtttaca
ttacacggccattacggtccaataactagtatatttattgatcattaccaaagttgtact
ggtggttctggttcacaagacggtctactatgtgtatgggatttaataaccggtgcctgc
atgtacagcatacaagcacatgatggtgcaatcgtgtcattgatttgttcatcgagttat
gtgatttccatgggcacggatgaacggctttacatttgggagcgatttcaagggaatttg
ctcaacacaatcaacgtgccttacgtttatacaagtttattgatgttgacaccgtctcta
ctcatcacagctaaacctggtgcattggtcatttgggatgtacgaaatggtgaattaaca
cgtgaaattaaattagattgtttgaattcgcatctatgctcgaaaaaaattctatttgct
agtggttcagtggtctgtgattatggcaatgaaatgagaataatacggtttccagttgta
aacgataaatgcgactaa
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integrated database retrieval system
