KEGG   Contarinia nasturtii (swede midge): 116351085
Entry
116351085         CDS       T08003                                 
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
cns  Contarinia nasturtii (swede midge)
Pathway
cns00565  Ether lipid metabolism
cns01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cns00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    116351085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cns03036]
    116351085
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cns04147]
    116351085
Chromosome and associated proteins [BR:cns03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    116351085
Exosome [BR:cns04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116351085
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_DCAF4 NBCH_WD40 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_SPT8 Nucleoporin_N LisH_PAC1 Beta-prop_WDR75_2nd LisH Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 116351085
NCBI-ProteinID: XP_031638995
LinkDB
Position
Unknown
AA seq 460 aa
MCLQIGDIVVHVLIALMFEKSHIHSRTFIYAIRFHIKNTFVYLSHVNFTQCINKLILFCR
NKAIADYLGANNYIDALESFRKEADLDATESIEIKYSGLLEKKWTSVIRLQKKVMELEAK
LSEVQKEASEGGPIKAKRAPGEWIPRPPEKFTLNGHRATITRVIFHPVFSLLITSSEDAT
IKVWDFETGEYERTLKGHTDSVQDIAFDVQGKVLASCSADMSIKLWDFTQTFECFKTMLG
HDHNVSSVAFVPAGDFVLSASRDKTIKMWEVATGYCIKSYVGHREWVRMIRVHPDGAIFA
SCSNDHSIRVWNINTKECKVELRDHDHTVECIAWAGENASQTINEAAGTDNKTGSHHGPF
LASGSRDKSIRVWDISIGVCLFVLNGHDNWVRGIVFHPGGKFIISASDDRTIRCWDIRNK
RCLKTINAHQHFCTSVDFHQNLPYVISGSVDQTVKVFECR
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgtgtttgcaaattggtgacattgttgtccatgtattgattgcattgatgtttgagaag
tctcacattcattctcggacattcatatacgctattagatttcatatcaaaaatactttc
gtctacctttcacatgttaattttacacagtgtataaacaaattaatattattttgcaga
aataaggcgattgctgactacctaggtgctaataattacatcgacgcattagaatcgttt
cgcaaagaagctgatttggatgccacggaatcgattgaaattaaatatagtggtctgttg
gagaaaaaatggacatctgtaattcgtttacaaaagaaggtaatggaacttgaagcgaaa
ctgtctgaggttcaaaaagaagcctccgagggtggaccaattaaagcaaagcgagcacca
ggcgaatggataccacgaccacctgaaaaatttaccttgaatggacatagagccaccata
accagggttatatttcatccagtgttcagcttattaattacatcttccgaagacgccacg
attaaagtatgggatttcgaaactggagaatatgaacggactcttaaagggcatacagat
tccgtacaagacattgcttttgatgtacaaggaaaagtactagcctcttgtagtgccgat
atgtcaataaaattgtgggatttcacgcaaacgtttgagtgtttcaaaacaatgcttggt
catgatcacaatgtttcatcagtcgcatttgttccagctggtgattttgttttatctgca
tcacgcgataaaacaattaaaatgtgggaagttgctactggatactgcattaaatcatat
gttggacaccgggagtgggttcgaatgattcgcgttcatccggatggtgcaatttttgca
tcctgttcaaatgaccattcaattcgtgtatggaatataaatacaaaagagtgcaaagtt
gaattacgagaccatgaccatactgttgaatgcatcgcatgggctggcgaaaatgcatcg
cagactataaatgaagcagccggcactgataacaagacaggctcgcaccatggaccgttt
ttggcttctggatcccgtgacaaaagcatacgggtttgggacattagcattggtgtatgt
cttttcgttttgaatggccatgacaattgggtaagaggaattgtttttcacccgggtggt
aaatttataatatcagctagcgatgaccgaaccatacgctgctgggatatacgtaataag
agatgtctcaaaactattaacgcgcatcagcacttttgcacatctgttgattttcaccaa
aatcttccttatgtgatctcaggcagtgtcgaccagactgtaaaggtttttgagtgccgc
taa

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