Contarinia nasturtii (swede midge): 116351652
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Entry
116351652 CDS
T08003
Name
(RefSeq) vesicular integral-membrane protein VIP36
KO
K10082
lectin, mannose-binding 2
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116351652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116351652
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cns04091
]
116351652
Membrane trafficking [BR:
cns04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
116351652
Lectins [BR:
cns04091
]
L-type lectins
116351652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_leg-like
Lectin_L-type_dom
Lectin_legB
Phage_holin_2_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
116351652
NCBI-ProteinID:
XP_031639680
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MMWINSFFILLISYFTFINADEYMKREFSLVKPYFGAGMTLPYWDFTGSTLVTSNYIRLT
PDIQSRSGAVWNSVPCMTQNWEVNINFKVSGKGKDLFGDGFAIWYARDRLVNGPVFGSKD
FFHGLAIILDTYSNHNGPHNHQHPYISAMINNGTLSYDHDRDGTLTQIAGCEAKFRNVDY
ETHISIKYLNEKLTVMTDLEDKHEWKVCFEANHVKLPTGYYFGASATTGDLSDNHDIISF
KFYELEPIVDDATLEARKSIIPSAEVLEAPRERKEDLKPGMSNVKIFFLILFGMICTIVL
AIFGIMYYQKRKESSRKLW
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggataaattctttttttatactacttataagctattttacgttcattaatgcc
gatgaatatatgaaacgtgaattttctttggtgaaaccatattttggtgccggtatgacg
ctgccttattgggattttaccggttccacattggttacatcaaattatattcgtttgaca
ccagacatacagtctcgaagtggtgctgtttggaattcagtgccatgtatgacacaaaat
tgggaagtgaatataaactttaaggtctcgggaaagggaaaagatctttttggtgatgga
tttgcgatttggtatgcgagagatcgcttggtaaatggaccagtgtttggaagtaaagat
ttcttccatggattagctattatattagacacttacagtaatcacaatggaccacataat
catcaacatccatatattagcgccatgataaataatggtacattgagctacgatcatgat
cgagatggtacgcttacacaaattgccggctgtgaagcaaaattccgtaatgttgactat
gaaacacacatcagcatcaaatatttgaacgaaaaactaacggttatgactgatttggag
gataaacacgagtggaaagtttgctttgaagccaatcatgttaaattaccaactggatac
tattttggagcatcggctacaactggtgatttatccgataaccatgatatcatctcattt
aaattctacgaactagaaccaattgttgatgatgcaacattagaggcgaggaagagtatt
attccatcggctgaagtgttggaagctccacgagaaagaaaagaagatttaaaaccagga
atgtcaaatgtcaagatctttttcttgattttgttcggtatgatatgcaccatagtttta
gctatttttggtattatgtattaccaaaaacgtaaagaatcatcacgaaaactttggtga
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