Contarinia nasturtii (swede midge): 116351999
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Entry
116351999 CDS
T08003
Name
(RefSeq) transcription elongation regulator 1
KO
K12824
transcription elongation regulator 1
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116351999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cns03041
]
116351999
Spliceosome [BR:
cns03041
]
Complex A
U1 snRNP components
U1 related factors
116351999
Complex B
116351999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
RhoGAP-FF1
PAS_4
Motif
Other DBs
NCBI-GeneID:
116351999
NCBI-ProteinID:
XP_031640032
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
METNSNEGATTVDSAINMDPSEKNMKTDDEFYDDSAQGSEFDNAENDEGFEQRFQSVNRG
GFRGRYQGNPGAISPRFRGRGFAPNQMGQQIRGRGGPQFFRGNRAGAPRFQNSGNFDPNW
NNGPQMYGNNSHMGFGNQQNDQSNAPFHQRNNFNQVELWVETKTDEGKSYYYNAISRETT
WTRPEGQFVKIMGQSEVEAMQAAKMQQQQQAPQDQQKADAQSAASNPSESVPVTGESQSN
AENTEPTESVQLNGENKTESNGNVDASAGSNPATNEPAKIDAPTSNQPASQPSPAQNHQN
TAQPLMNMPMQNQAPPAQMQTQFNTPPPFGFGMPPPNYMYPPNPWSMPWQQPMPQMGNDK
SRIDPQIMARAAEWSEHRAPDGRPYYYHAIRGESVWEKPQALKDLEAARMTGHPQPFPPM
GAPGMMPPIVNPSMHPQQIVSNVPFDAMNFKSDKKPDESEESKMEKKKKEEAAAKKKKED
EEKAKQTSTKPQDKSRPISSTPIAGTPWCVVWTGDGRVFFYNPSTRTSVWERPEDLVGRA
DVDKAVAATPANAPNAAAATTAAATTAEDTTIATKRSESESSTENEVPNKKPKLAETSLE
STNTPPTTAVPATATPTKPVTDKKNDMGKEAAIEAEVRAARERALVPLETRVKQFKDMLK
EKDVSAFSTWEKELHKIVFDPRYLLLTSRERKQVFEKYVKERAEEERREKRNKMRQKRDD
FRSLMESANLHGKSSFSDFAQKFGKDERFKGIEKMRDRESIFNEFILEVRRREKDEKIQK
KETIRKDFLALLRECSEITRHSRWADVKKLIDGDKRYRAVESSLLREDYFHDHCKILKEE
KRKQKEKERDRKDKKDREKDKEKEKDKDKHRDKDRREKGKEEKGKKQNTSKDEEKASRNE
SDKDDQEDGEHQSSTSEDESDKHQKERDRQMRAIVEREKEVQQQLAGHMRNLHKEREHHK
RDEAIRHFNALLADLVRNPDLTWKEVKKLLRKDSRWESVEQLDRENRERIFNDHIFQLGE
KKRDKFREMLDELTLDLTASWKDVKKQIRDDPRYLKYNSSEKCEREFREYVRDKTTEAKN
AFKELLQECKLITYKSFETVKENPLHLKEIEDILKNDKRFLTLDHIQYDRSHILMNYLEE
LHKRGPPPPPTASDSSRRK
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaatagcaacgaaggcgctacaacggttgattccgccataaatatggatcca
tcggaaaaaaatatgaaaacggacgatgaattttacgatgattcggcacaagggtctgaa
tttgataatgccgaaaatgatgagggtttcgaacaacgttttcaatcagtcaatcgtggt
ggattcagaggccgatatcaaggaaatcccggtgcaatatcgccgcgattcagaggtcga
ggatttgcaccaaatcaaatgggtcaacaaatacgtggccgtggcggaccacaattcttt
cgcggcaatcgtgcgggtgcaccaagatttcagaattccggtaactttgatccaaattgg
aataatggaccacaaatgtatggcaataattcacacatgggtttcggaaatcaacaaaat
gaccagtcaaatgcaccatttcatcagagaaataatttcaatcaagttgaattatgggtc
gagactaaaaccgatgaaggcaaatcgtactattataatgcaataagtcgtgaaacaacg
tggacacgtccagaaggccaatttgtaaaaataatgggtcagagcgaagttgaagcaatg
caagcagccaaaatgcaacaacaacaacaggcaccacaagatcaacaaaaggctgatgct
caatcggctgcatcgaatccatcagaaagtgtaccggtcacgggtgaaagtcaatcaaat
gctgaaaataccgaaccaacagagagtgttcaattaaatggtgaaaataaaactgaatcg
aatggaaatgtggacgcatcggctggatcaaatccagccacaaatgaaccagctaaaatc
gatgcacccacgtcaaatcagccggcatcacaaccttcaccagcacagaatcaccaaaat
accgctcagccattgatgaatatgccaatgcaaaatcaagcaccgccagcacaaatgcaa
acacaattcaatacaccgccaccgttcggattcggtatgccaccgccaaattatatgtat
ccaccgaatccatggtcaatgccctggcaacagccaatgccacaaatgggaaacgataaa
tcacgaatcgatccacagataatggcacgtgcagcagaatggagtgaacatcgagctccc
gacggtcgaccatattattatcatgccattcggggtgaaagcgtgtgggaaaaaccgcaa
gcattaaaagacttagaagctgctcgcatgactggtcatccacaaccattcccgcctatg
ggtgcaccaggaatgatgccaccgattgtaaatccatcaatgcatccacaacaaattgtc
tcgaatgtgccatttgatgcaatgaattttaaatctgataagaaacctgacgaaagcgaa
gagtcaaaaatggaaaagaagaagaaagaagaagcggccgctaaaaagaagaaagaagac
gaagaaaaagccaaacaaacatcaactaaaccgcaagacaagagtcgaccaatatcatcg
acaccaatagcgggcacaccttggtgcgttgtatggactggtgatggtcgtgtttttttc
tacaatccatcaacacgaacatcggtatgggaacgaccagaagacctagttggcagagcc
gatgttgacaaagctgtagcagcgactccagctaacgcacctaacgcagcggcagcaaca
acagctgcagcaaccactgcagaagatacaacaatagcaacaaagcgttccgaatccgag
tcgagtaccgaaaacgaggtaccaaataaaaagcctaaattagctgaaacatcgttagaa
agtacaaatacgccaccaaccactgccgtaccggctacagcgaccccgacaaaaccggtc
actgacaaaaagaacgatatgggcaaagaggcggccatcgaagctgaagttcgtgctgcc
cgagaacgtgcacttgtaccacttgaaacacgtgttaaacaattcaaagatatgttaaaa
gaaaaagatgtatctgcctttagtacttgggaaaaagaattgcataaaattgtttttgat
ccacgttatttgctcttaacgtctcgtgaacgaaaacaagtatttgaaaaatatgtcaag
gaacgggccgaagaagaacgacgcgaaaagagaaataaaatgagacagaaacgtgatgat
ttccgttcacttatggaatcggcaaatctccatggaaaatcatcgttttctgatttcgcg
cagaagtttggcaaagatgaacgtttcaagggcatagagaagatgcgtgatcgcgaatca
atattcaacgaattcattttggaagtgcgtcgtcgcgaaaaagatgaaaaaatccagaag
aaagaaacgattcgtaaggattttctagcattgttgcgggaatgcagtgaaataacgcgt
cacagccgttgggcggatgtaaagaagctcatcgatggcgacaaaaggtatcgagctgtt
gaaagttccttgttacgtgaggactattttcatgatcactgcaaaatcttgaaggaagaa
aagcgaaagcagaaggagaaagaacgtgatcgcaaagacaaaaaggatcgagaaaaggac
aaggaaaaggaaaaggataaagacaagcatcgcgataaggatcgtcgtgaaaaaggtaaa
gaagaaaaaggtaaaaaacaaaataccagcaaagatgaggaaaaagccagtcgtaacgaa
tctgacaaagacgatcaggaggatggtgaacatcaatcgtcaacgtcagaagatgaatcg
gacaaacatcagaaggagcgtgaccggcaaatgcgtgcaattgtggaacgtgagaaggag
gtgcaacaacaattggccggccacatgcgaaatttgcacaaggaacgtgaacatcacaaa
cgtgacgaagcaattcgacattttaatgcgttgcttgccgatttggtgcgtaatccagat
ctcacgtggaaagaggtaaaaaaactattgcgtaaagatagtcgttgggaatccgttgaa
cagctggatcgtgagaatcgcgaacgtattttcaacgatcacatctttcaattgggtgaa
aagaaacgtgacaaattccgtgaaatgcttgatgaactcacattggatttgaccgcatca
tggaaagatgtaaagaagcaaattcgtgacgatccacgctacttaaagtataacagtagt
gaaaaatgtgaacgtgaattcagggaatacgtacgcgataagacaaccgaagccaaaaat
gcattcaaagaactgctacaggaatgcaaattaattacgtacaaaagttttgaaacagtc
aaggaaaatccactgcatcttaaggaaattgaagacattttgaaaaatgataaacggttt
ctaacattggatcatattcaatacgaccgttcgcatattttgatgaactacttagaagaa
ttgcataaacgtggcccgcctccaccgccgacggcctcagattccagcagacgaaaataa
DBGET
integrated database retrieval system
