Contarinia nasturtii (swede midge): 116352006
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Entry
116352006 CDS
T08003
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116352006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cns03041
]
116352006
Spliceosome [BR:
cns03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116352006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
116352006
NCBI-ProteinID:
XP_031640039
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MSLADELLADLEEIGDNFGDDEIKVKEEPIDGDEENGYDAIEKMEIDDSVSSIRSLCKLH
DSERLNRILHQINEYTSKPRTSNQIIGNVESDPEYQLIVEVNTVAVEIDNEISIIHKFTK
NKYQKRFPELDSLIVGEMEYLMAVKELGNDLEQIKNNEKLQQILTQATIMIVSVTASTTQ
GTLLTDDEKMKINEACDMAVDLSNYKAKIFEYVESRMTFIAPNLSMIVGASTAAKIVGVA
GGLVKLSKIPACNVILLGSQKKTLAGFSRTQMLPHTGFIFYSTIVQDTAPDLRRKAARLV
AAKCTLAARVDASHESVNGEIGLQFKEEIEKKLDKLQEPPPVKFIKPLPKPIEISKKKRG
GKRVRKMKERYAMTEFRKQANRLNFGDIEEDAYQDDLGYTRGTIGKAGTGRVRLPQVDEK
TKVRISKTLQKNLQKQQVYGGSTTVRKQISGTASSVAFTPLQGLEIVNPQAAEKSTDTNA
KYFSNTSGFMSVGK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggccgatgaattgctcgccgatttagaagagattggagataatttcggtgat
gatgaaattaaggttaaagaagaaccgatcgatggtgatgaagagaatggctacgatgca
atcgaaaaaatggaaatcgatgattcggtatcatcgattcggtcgctgtgtaaactacat
gattcggaacgattaaataggattttacatcaaattaatgagtacacttcaaagccaaga
acttcaaatcagatcattggaaacgttgaatccgatcccgaatatcagttaattgttgag
gtgaacaccgttgctgttgaaatagacaatgaaatttcaatcatacacaaatttacgaaa
aacaaatatcagaaacgatttcctgaattggattctctaattgttggtgaaatggagtat
ttgatggccgtcaaagagcttggaaatgatttggagcaaattaaaaataacgaaaaatta
caacaaattttaacgcaagccactattatgattgtttcagtgactgcgtcaaccactcag
ggtacgcttttgacagatgacgaaaaaatgaaaattaatgaagcttgcgatatggccgtc
gatctaagtaattacaaggcgaaaatctttgaatatgtcgaaagccgaatgacattcatt
gcaccaaatttgtcaatgatcgtgggcgcatcaacggccgccaaaatagttggagttgca
ggcggattggtaaagttatcgaaaatacccgcttgcaatgtcatcctgttgggttcacaa
aagaaaactttggccggattctcgagaacgcaaatgttaccacatacgggtttcattttc
tattcaacaatagtacaagatacagcaccggatcttcgtaggaaagcagcacgtttggtc
gccgccaagtgtacattagctgcacgagttgatgcaagccatgaaagtgttaacggtgag
attggattgcaatttaaagaagaaatcgaaaagaaattggacaaattgcaagagccgcca
ccagttaagttcattaaaccacttccaaaaccgattgaaatcagtaaaaagaagcgtgga
ggtaaacgtgttcgcaaaatgaaagaacgttatgcaatgaccgagtttcgcaaacaggcc
aaccgtctcaactttggagatattgaagaagatgcatatcaagatgatttgggatacaca
agaggcacaattggaaaggctggcactggtcgtgttcgattaccacaagttgatgagaaa
acgaaagtgcgcattagcaaaacgctgcagaaaaacttacaaaagcaacaagtatacggt
ggaagtacaacagtacgtaagcaaatttctggtactgcttcgagtgttgcatttacgccg
ttacaaggtcttgaaattgttaatccacaagcagccgaaaaatcaacagatacaaatgcc
aaatatttttcaaatacatcgggttttatgtcagttggaaaatga
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