Contarinia nasturtii (swede midge): 116352013
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Entry
116352013 CDS
T08003
Name
(RefSeq) DNA repair protein XRCC3 homolog isoform X1
KO
K10880
DNA-repair protein XRCC3
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116352013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cns03400
]
116352013
DNA repair and recombination proteins [BR:
cns03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
116352013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad51
ATPase
AAA_25
SAM_EPH
DnaB_C
DUF4100
Motif
Other DBs
NCBI-GeneID:
116352013
NCBI-ProteinID:
XP_031640053
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MNSGYIYQEQDLLDLSLNIPDRIQLILAGKNVTTVEKVLKTSNIELMSFGLTDDEVDALK
TAVSSIVPSATYMTALESSSIMAPKWRHLTFGCSALDRITRNGLPIRGITEIVGESGCGK
SKAYLLKSKSQICLTLALNVQLSLADGGLNRSAIYICTEDAFPSKRLVQIASFYEKQYHR
TNWLDNIFVEYCPESAVLMNCICNRLPSFMAQQSIGLIIIDSIAGAFRRDSDAIARADNM
RKLVFKLQALADDYDCAVVCVNQITASLHDKCIPSLGLAWSNLVSNQFKIRKLQKQITKI
ESTILNTPVTVRSMEIGFSPELSNQFAEFIITERGICNVPNN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgggatacatttaccaagagcaggatctattggatctgtcattaaacattcca
gacagaattcagttaatattggctggaaaaaatgtaacaaccgtggaaaaagtattgaaa
acatcaaacattgaattgatgtcatttggattaaccgatgacgaggtcgatgcattaaaa
acggctgtatcgtcaattgtgccatctgcaacatacatgacagcattggaatcttcatcg
attatggcaccaaaatggagacacttaacgtttggatgttcagcattggatcgaatcact
cgaaatggtttgccaataagaggaattacggaaattgttggagagtctggatgtggtaaa
tctaaggcatacttacttaaaagtaaatctcaaatatgtttaacactagcgctgaatgtt
caactatcgttggccgatggtggtttgaaccgttctgccatctacatctgtacagaagat
gcattcccatcaaaacgtttagtacaaattgccagcttttatgagaaacaataccatagg
accaattggcttgacaatatttttgtggaatattgtccggaatcggcggttctgatgaat
tgtatttgcaatcgattacccagtttcatggcacaacaaagtattggcttgattattatc
gactcaattgcgggagcttttcgtcgcgatagtgatgcaattgcacgtgccgataacatg
cgaaaactagtttttaaattacaagcacttgccgatgactatgactgtgctgttgtctgt
gtaaatcagataacagcttcactgcatgacaagtgtataccaagtctgggtctcgcttgg
agtaatcttgtttcaaatcaattcaaaattcgcaaacttcaaaaacaaattacgaaaatt
gaatcaacaatattaaatacaccggttacagtgcgaagcatggaaattggattttcacct
gaattatcaaatcaatttgcagaatttataattaccgaacggggcatatgtaatgtgcca
aataactaa
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