Contarinia nasturtii (swede midge): 116352044
Help
Entry
116352044 CDS
T08003
Name
(RefSeq) uncharacterized protein LOC116352044 isoform X1
KO
K25209
zinc finger protein castor
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cns03000
]
116352044
Transcription factors [BR:
cns03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116352044
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_CASZ1
zf-C2H2_CASZ1_1
Motif
Other DBs
NCBI-GeneID:
116352044
NCBI-ProteinID:
XP_031640144
LinkDB
All DBs
Position
Unknown
AA seq
1492 aa
AA seq
DB search
MNRGDILAKLQSTSAAETRTLSITDVAIQNKSDTTNALNVFDAQSVFKLISSASDLEHRF
DLDNDFDSTKNNNTATAQQSYFDMHATIKNKRKNFKPRNATAVEEITTATTAANTAAAVE
PSLTDQLILNLMMQNKMKQIQQELHQGQLKRWNDIDNGSKLDQQTSVSSDRINSNNNESC
NILKSPPSSPLANGHGTSGENAYNAVQDLLSVYGLTMSPHDIVDAFNKRNEAAASIRDLA
NNPLLKKGTIANQSATQSTTQKQQQNALVPPTPPRTPITPSAQHQQMTDGVSDDDDNCES
KSVDSMANRKRKLSTILGSNKRMHVEQTIKSETDADSDSNHENNDRATSINDNDDGASSR
MSDFDDGNASLKNRAFTDTNDASFDSSYSAYLQETKQQLAKVAQQQQPTLNLSQSLSNIV
DVSGLSLAKDKYFEKPSMSFLSPAATALKMVTMQGDESKLIDSGKYLSKYSSFMECNHDQ
CAIDKLREHFHCLDILCMNVNKVLCKREEVLRHLKWHKKRNESLNHGFLRFSSTDDCSIQ
FGECQHNGKQTHYHCLQGNCDKVYISTSDVQMHSNYHRKDSAIMQEGFQRFRATEECNAD
FCSFAGQRTTHFHCIRDSCNYTFKNKAEMEKHKTYHIKDELLARDGFKKFMKNEPCSFDR
CRFSLQCNHIHCVRENCYYVLHSSGQLLSHKRKHDRMDSEQAYQQFKLAQKNDDVLSHDN
NDTEMSGSEPMASKSLSPFPGNLSTLLSKYAENDNKMEALLTNESMEILQQLQFQKQALL
QSQAAKAAVAASLIGKANDDDITADNNNYDAIDPSVLPKSFIQNASATIGRSITSIEIDQ
LKQIYSATETAKQKQINALLFAQNNFNSTDQAEPLNLNLKKENAKDMNASLLSAVVQKIQ
NQNMPTNLQQITSIDGLFNRKRGRPPKNRVVEVYGNVQTQNRPQAIFTSFKLEKNGKASS
PLPPESSSFRAKTPLNQSPENHGDESSASKESPTNFSVHRLSDSGGSGCGSGSSDRKRRL
SFSSSPSTDNEKVSIVRAAGTFFPQNCDNDSESSPPACLRRKSKESVDYVKKCSFSHCNQ
SNESHVHCDDCSEVFDDESKLMAHSVKHKVSDSGPESDPSQELMQNFAKQMAKQSEMFNN
MESFMNPAASVISNLASLGQNQMAMGGGEGGFSAFSDQLSAQIQTLCLAQLAALYQNNPM
MYQHLYPLLGAVEQMKQQDAQRMFMPQTANPLQMANPFGAFDLTSLAAVNANKKSANAAT
KLPKMSGKNGDPKGSKAGGSGSEMASNRTSGNFKIFKDEPIPKGYLKFRFNEDCGFAQCG
YSNLQSHFHCCRTDCHYSFCDKTRFVQHTARHERLDKLMGDDFKQYRANMSCGHDDCVYK
NNLGANNKSSHFHCLKCEFICSDTNKVVAHRRHHSKLEYISAAGFRKVANNEPCTHQSKK
SAGENLDENAQNDEDDGNNTECIYSMKQTHYHCLICDCSVLSRAQLSSHQHK
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaggcgatatattggctaaattacaatcaacatcggcagctgagacgcgcaca
ctgtcaataaccgatgttgccattcaaaataaaagcgatacaacaaacgcattaaatgta
ttcgatgcacaatccgtatttaaattgatttcaagtgcaagcgatttagagcatcgcttc
gatttagacaacgattttgatagtacaaaaaataacaatacagcaacagcgcaacaatcg
tactttgacatgcatgcaacgataaaaaataaacgaaaaaattttaaaccacgcaatgca
acggctgttgaagagatcacgactgcgacaacagccgcaaatacagctgccgccgtcgaa
ccgtcactcactgaccagctcattctcaatttgatgatgcaaaataaaatgaaacaaatt
caacaagaactgcatcaaggacaattgaaacgatggaacgacattgacaacggcagtaaa
cttgaccagcaaaccagtgtatcgagcgaccgcatcaattccaacaacaatgaatcatgc
aacattcttaaatcaccacctagctcaccattggccaatggtcatggcacaagtggcgaa
aacgcatacaatgccgttcaagatttactctccgtttatggtttgacgatgtcaccacat
gatatagtggacgcatttaataaaagaaacgaagcggctgcatcgattcgtgatctagcg
aataacccattgttaaaaaagggtaccattgccaatcaatcggccacacaatccaccaca
caaaagcaacaacagaatgcattagtgccgcccacaccaccgcgaacaccaatcactccg
tccgctcagcatcaacagatgactgacggtgtgagcgatgacgatgataattgtgagagc
aaatcagtggattcgatggcgaaccgtaaacgaaaattaagcactattttaggttcaaat
aagcgaatgcatgtagagcaaacgattaaatcagaaaccgatgctgattcggacagcaat
catgagaacaacgatcgtgccaccagcattaacgataatgacgacggtgccagtagccga
atgagcgattttgatgatggaaatgcgtcattgaaaaatcgtgcgttcactgacaccaat
gatgcatcattcgattcatcgtattcggcatatttgcaagaaacaaaacaacaattggcc
aaagtcgcccaacaacaacaaccaacgctcaatttatcgcaatcattatcgaacattgtc
gatgtgtctggccttagtttggccaaggataaatattttgaaaaaccatcaatgagtttt
ctttcgccggcagcgaccgcattgaaaatggtcactatgcaaggtgacgaaagtaaacta
atcgattcgggcaaatatctgtcgaaatattcgtcgtttatggaatgcaatcatgatcaa
tgtgcgatcgataaattgcgcgaacattttcattgtttggacattttatgtatgaatgta
aataaagtactgtgcaaacgcgaagaggttttgcgacatttgaaatggcacaaaaaacgt
aatgaaagcttaaatcatggttttcttcgattttcatcgaccgacgattgttccattcaa
tttggcgaatgtcaacataatggcaaacaaacacattatcattgcttacaaggaaattgc
gataaggtttacatttcgaccagtgatgttcaaatgcactcaaactatcatcgcaaagat
tcggctatcatgcaagaagggttccaacggttccgtgcgaccgaagaatgtaatgctgac
ttttgtagttttgctggtcaacgcactacacatttccattgtattcgtgacagttgcaat
tatacattcaaaaataaagccgaaatggaaaaacacaagacttatcacatcaaagatgaa
ttattggcacgcgatggtttcaaaaaattcatgaaaaatgaaccgtgctcatttgatcgt
tgtcgtttctccttgcaatgcaatcacattcattgtgttcgtgaaaattgttactacgta
ttgcattcgagtggtcaattgttgagccacaagcgtaagcatgatcgaatggattcagaa
caagcgtatcaacaatttaaattggcacaaaagaatgatgacgttttgtcgcatgataac
aatgacactgaaatgagtggatcagagccaatggcttcaaaaagtttgtcaccatttcct
ggtaacttatcaacacttctatcaaaatatgctgaaaatgataataaaatggaggcattg
ttgaccaatgaatcgatggaaattttacaacaacttcaattccaaaagcaagctttgctt
cagagtcaagctgccaaagcggctgttgctgcttcactcattggcaaagccaatgacgat
gacattaccgccgataataataattacgatgccatcgatccatcggtattaccaaagtca
tttattcaaaatgccagtgccacaatcggtcgttccattacatcaatcgaaattgatcaa
ttgaaacaaatttattcagccactgaaacggccaaacaaaaacaaatcaatgccttatta
tttgcacaaaataatttcaatagcaccgatcaagccgaaccacttaatttgaatttaaaa
aaagagaatgcaaaagatatgaacgcttcattgttgtcggctgttgtgcaaaagatacaa
aaccaaaatatgccaaccaatttacaacaaatcacttccatcgatgggctattcaatcga
aaacgtggccgaccaccaaagaatcgcgtcgttgaagtctatggaaatgtacaaacacag
aatcggccacaggcaattttcaccagttttaaattggagaaaaatggcaaagcttcatca
ccattgccacctgaaagcagtagttttcgtgcaaaaactccattaaatcaatcgccagag
aatcatggcgatgaaagtagtgcctcaaaagagtcacccaccaatttctccgtgcatcga
ctcagtgattcgggtggcagtggctgtggaagtggtagcagcgatcgcaaacgtcgttta
tcattttcatcgtcaccatcaactgataatgaaaaagtgtcgattgttcgtgccgctggt
acattctttccacagaattgtgacaatgacagtgaatcgtcgccaccggcttgtttgcga
cgcaagtcaaaggaaagtgttgactatgtgaaaaaatgctcattttcccattgcaatcaa
tcaaacgaatcacatgttcattgtgatgattgctctgaggttttcgatgatgaatcaaaa
ttgatggctcattctgtgaagcataaagtatcggattctggaccagaaagtgatccatca
caagaattgatgcaaaattttgccaaacaaatggccaaacaatcggaaatgtttaataat
atggaatcgtttatgaatccagcggccagtgtcatttcaaatttggcctcgttgggccaa
aatcaaatggcaatgggcggtggtgaaggtggcttttccgctttcagcgatcaattgtct
gcccaaatacaaacattgtgcttggcacaattggccgccttatatcaaaacaatccgatg
atgtatcaacacttgtatcctttacttggtgctgtcgaacaaatgaaacaacaagatgca
caacgcatgtttatgccacaaacggcaaatccacttcaaatggcaaatccatttggtgca
ttcgatttaaccagccttgcagcggtaaatgcaaacaaaaaaagtgccaacgctgcgaca
aaattgccaaaaatgagtggcaaaaatggtgatccaaaaggttcaaaagctggtggttcc
ggcagtgaaatggcatcgaatcgaacatctggcaattttaaaatctttaaagacgaacca
attccaaaaggctatctgaaatttcgatttaatgaagattgcggttttgcacaatgcggt
tattcgaatcttcagagtcattttcattgttgtcgcaccgattgtcactacagtttctgt
gataagacacgatttgtacagcatacggcacggcatgaacgcttggacaaactgatgggc
gacgacttcaaacagtatcgagctaatatgagttgcggacacgatgattgtgtttataag
aataatttgggcgcaaacaataagtcatcacatttccattgtttgaagtgtgagttcata
tgctcggacacaaataaggttgtggctcatcgacgtcatcacagcaaattggaatacata
agcgctgccggatttcgcaaggtagctaataatgaaccatgcacacatcaatcaaagaaa
tcagccggcgaaaatctagatgaaaatgcacaaaatgatgaagatgatggaaacaacact
gaatgcatctatagcatgaaacaaacacattatcattgcttgatttgcgattgctcagtg
cttagtcgggctcaacttagctcacatcaacacaaatag
DBGET
integrated database retrieval system
